RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 ERVK-9P63128 1117 aa11.16□□□□□ -0.62
SRRM1-205ENST00000462710 ERVK-24P63145 666 aa11.16□□□□□ -0.62
SRRM1-205ENST00000462710 LRRC26Q2I0M4 334 aa11.16□□□□□ -0.62
SRRM1-205ENST00000462710 TRMT2AQ8IZ69 625 aaKnown RBP11.16□□□□□ -0.62
SRRM1-205ENST00000462710 EHD4Q9H223 541 aa11.16□□□□□ -0.62
SRRM1-205ENST00000462710 RBPJLQ9UBG7 517 aa11.16□□□□□ -0.62
SRRM1-205ENST00000462710 ZNF697Q5TEC3 545 aa11.16□□□□□ -0.62
SRRM1-205ENST00000462710 KLHDC4Q8TBB5 520 aa11.16□□□□□ -0.62
SRRM1-205ENST00000462710 PRDM6Q9NQX0 595 aa11.16□□□□□ -0.62
SRRM1-205ENST00000462710 USP17L10C9JJH3 530 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 USP14P54578 494 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 HMGCS2P54868 508 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 GPR142Q7Z601 462 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 ZNF384Q8TF68 577 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 DDX20Q9UHI6 824 aaKnown RBP11.15□□□□□ -0.62
SRRM1-205ENST00000462710 BAG3O95817 575 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 PTPREP23469 700 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 TRIM32Q13049 653 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 GRB14Q14449 540 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 ATF7IPQ6VMQ6 1270 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 ABRAQ8N0Z2 381 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 P2RX7Q99572 595 aaKnown RBP11.15□□□□□ -0.62
SRRM1-205ENST00000462710 LBHD1Q9BQE6 289 aaPredicted RBP11.15□□□□□ -0.62
SRRM1-205ENST00000462710 TRIOBPQ9H2D6 2365 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 MRS2Q9HD23 443 aa11.15□□□□□ -0.62
SRRM1-205ENST00000462710 USP17L15C9J2P7 530 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 USP17L13C9JLJ4 530 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 USP17L11C9JVI0 530 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 USP17L18D6R9N7 530 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 USP17L22D6RA61 530 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 USP17L17D6RBQ6 530 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 USP17L19D6RCP7 530 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 USP17L20D6RJB6 530 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 CNMDO75829 334 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 SSH1Q8WYL5 1049 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 HTTP42858 3142 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 ARRDC4Q8NCT1 418 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 NOL10Q9BSC4 688 aaKnown RBP11.14□□□□□ -0.63
SRRM1-205ENST00000462710 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
SRRM1-205ENST00000462710 GNAI3P08754 354 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 SLFN5Q08AF3 891 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 RRP1BQ14684 758 aaKnown RBP11.13□□□□□ -0.63
SRRM1-205ENST00000462710 TATDN1Q6P1N9 297 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 SPATA5Q8NB90 893 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 EDC3Q96F86 508 aaKnown RBP11.13□□□□□ -0.63
SRRM1-205ENST00000462710 KIAA1683Q9H0B3 1180 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
SRRM1-205ENST00000462710 MYH1P12882 1939 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 A0A1B0GUL7 405 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 STRNO43815 780 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 ADORA1P30542 326 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 Q7L0L9 218 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 TEX11Q8IYF3 940 aa11.13□□□□□ -0.63
SRRM1-205ENST00000462710 CYBAP13498 195 aa11.12□□□□□ -0.63
SRRM1-205ENST00000462710 CYP2B6P20813 491 aa11.12□□□□□ -0.63
SRRM1-205ENST00000462710 CATSPERGQ6ZRH7 1159 aa11.12□□□□□ -0.63
SRRM1-205ENST00000462710 TXNRD2Q9NNW7 524 aa11.12□□□□□ -0.63
SRRM1-205ENST00000462710 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
SRRM1-205ENST00000462710 CCND3P30281 292 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-205ENST00000462710 SEMA6BQ9H3T3 888 aa11.12□□□□□ -0.63
SRRM1-205ENST00000462710 EMILIN3Q9NT22 766 aa11.12□□□□□ -0.63
SRRM1-205ENST00000462710 PARP14Q460N5 1801 aa11.11□□□□□ -0.63
SRRM1-205ENST00000462710 PICALMQ13492 652 aa11.11□□□□□ -0.63
SRRM1-205ENST00000462710 MTMR2Q13614 643 aa11.11□□□□□ -0.63
SRRM1-205ENST00000462710 HLA-DOAP06340 250 aa11.11□□□□□ -0.63
SRRM1-205ENST00000462710 SYN1P17600 705 aa11.11□□□□□ -0.63
SRRM1-205ENST00000462710 RTP1P59025 263 aa11.11□□□□□ -0.63
SRRM1-205ENST00000462710 MB21D1Q8N884 522 aa11.11□□□□□ -0.63
SRRM1-205ENST00000462710 PHF24Q9UPV7 400 aa11.11□□□□□ -0.63
SRRM1-205ENST00000462710 SLC39A5Q6ZMH5 540 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 DNAJC18Q9H819 358 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 SLC5A4Q9NY91 659 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 ABCF2Q9UG63 623 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 PRKAG2Q9UGJ0 569 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 FLT1P17948 1338 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 KIAA0355O15063 1070 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 ANP32CO43423 234 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 COPB2P35606 906 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
SRRM1-205ENST00000462710 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
SRRM1-205ENST00000462710 CDX2Q99626 313 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-205ENST00000462710 DIS3Q9Y2L1 958 aaKnown RBP11.1□□□□□ -0.63
SRRM1-205ENST00000462710 Q3C1V9 767 aa11.09□□□□□ -0.63
SRRM1-205ENST00000462710 MAFAQ8NHW3 353 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-205ENST00000462710 TSEN34Q9BSV6 310 aaKnown RBP11.09□□□□□ -0.63
SRRM1-205ENST00000462710 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
SRRM1-205ENST00000462710 MSL3Q8N5Y2 521 aaKnown RBP11.09□□□□□ -0.63
SRRM1-205ENST00000462710 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-205ENST00000462710 PORCNQ9H237 461 aa11.09□□□□□ -0.63
SRRM1-205ENST00000462710 NAV1Q8NEY1 1877 aa11.09□□□□□ -0.63
SRRM1-205ENST00000462710 SEPT4O43236 478 aa11.08□□□□□ -0.64
SRRM1-205ENST00000462710 TFCP2Q12800 502 aa11.08□□□□□ -0.64
SRRM1-205ENST00000462710 SEZ6LQ9BYH1 1024 aa11.08□□□□□ -0.64
SRRM1-205ENST00000462710 MROH8Q9H579 483 aa11.08□□□□□ -0.64
SRRM1-205ENST00000462710 KBTBD13C9JR72 458 aa11.08□□□□□ -0.64
SRRM1-205ENST00000462710 TIMM10P62072 90 aa11.08□□□□□ -0.64
SRRM1-205ENST00000462710 ATP2B2Q01814 1243 aa11.08□□□□□ -0.64
SRRM1-205ENST00000462710 NAA16Q6N069 864 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms