RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 SHMT1P34896 483 aa13.9□□□□□ -0.18
TRAF3IP1-204ENST00000462122 SREBF2Q12772 1141 aa13.9□□□□□ -0.18
TRAF3IP1-204ENST00000462122 CERKLQ49MI3 558 aaPredicted RBP13.9□□□□□ -0.18
TRAF3IP1-204ENST00000462122 OTUD5Q96G74 571 aa13.9□□□□□ -0.18
TRAF3IP1-204ENST00000462122 DSCC1Q9BVC3 393 aa13.9□□□□□ -0.18
TRAF3IP1-204ENST00000462122 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
TRAF3IP1-204ENST00000462122 BAZ2AQ9UIF9 1905 aaKnown RBP13.9□□□□□ -0.18
TRAF3IP1-204ENST00000462122 DOCK1Q14185 1865 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 SGSM2O43147 1006 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 FGAP02671 866 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 GJA5P36382 358 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CDK8P49336 464 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 INHBEP58166 350 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 KIF23Q02241 960 aaPredicted RBP13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 MAP2K1Q02750 393 aaPredicted RBP13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 EVX2Q03828 476 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 PPARAQ07869 468 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 RRP1BQ14684 758 aaKnown RBP13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 DYNLL2Q96FJ2 89 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CCDC17Q96LX7 622 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ZBTB21Q9ULJ3 1066 aa13.89□□□□□ -0.19
TRAF3IP1-204ENST00000462122 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 IRF6O14896 467 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CDC45O75419 566 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 GDF11O95390 407 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 GTF2A2P52657 109 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 PDE4BQ07343 736 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ABCB5Q2M3G0 1257 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 SLC44A5Q8NCS7 719 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 IL25Q9H293 177 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CABP5Q9NP86 173 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ANAPC4Q9UJX5 808 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 KCNH4Q9UQ05 1017 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ZHX2Q9Y6X8 837 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 LAMB1P07942 1786 aa13.88□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CXCL11O14625 94 aa13.87□□□□□ -0.19
TRAF3IP1-204ENST00000462122 GH2P01242 217 aa13.87□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ZIC5Q96T25 663 aa13.87□□□□□ -0.19
TRAF3IP1-204ENST00000462122 MKNK2Q9HBH9 465 aa13.87□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CTNNA3Q9UI47 895 aa13.87□□□□□ -0.19
TRAF3IP1-204ENST00000462122 TESPA1A2RU30 521 aaPredicted RBP13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 SMIM22K7EJ46 135 aa13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 MPHOSPH10O00566 681 aaKnown RBP13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CETPP11597 493 aa13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 TM4SF4P48230 202 aa13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 TMEM179Q6ZVK1 233 aa13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ZNF280CQ8ND82 737 aa13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ESYT1Q9BSJ8 1104 aa13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 BEGAINQ9BUH8 593 aa13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 AFG3L2Q9Y4W6 797 aa13.86□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CCL15-CCL14A0A0B4J2E2 113 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ZNF213O14771 459 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CA12O43570 354 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 PCP11498 1178 aaKnown RBP13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 NT5C2P49902 561 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 JAG1P78504 1218 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CCL15Q16663 113 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 IMMTQ16891 758 aaKnown RBP13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ZNF444Q8N0Y2 327 aaPredicted RBP13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 WDR18Q9BV38 432 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 RNF41Q9H4P4 317 aaPredicted RBP13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 WBP1LQ9NX94 342 aa13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.85□□□□□ -0.19
TRAF3IP1-204ENST00000462122 A0A0G2JLL6 359 aaPredicted RBP13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 TRIM75PA6NK02 468 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ALDH1A1P00352 501 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 FGRP09769 529 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 AKR1B1P15121 316 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 RASA1P20936 1047 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CTDSPL2Q05D32 466 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 RAB3GAP1Q15042 981 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 SHROOM1Q2M3G4 852 aaPredicted RBP13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 OTUD7BQ6GQQ9 843 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 FASTKD5Q7L8L6 764 aaKnown RBP13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 PRRT2Q7Z6L0 340 aaPredicted RBP13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 CCDC84Q86UT8 332 aaPredicted RBP13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 STK11IPQ8N1F8 1099 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 U3KPZ7 1027 aaPredicted RBP13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 ATAD5Q96QE3 1844 aa13.84□□□□□ -0.19
TRAF3IP1-204ENST00000462122 USP17L10C9JJH3 530 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 ORC4O43929 436 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 SPP2Q13103 211 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 SEPT2Q15019 361 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 STAG1Q8WVM7 1258 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 BRI3BPQ8WY22 251 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 MAP4K1Q92918 833 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 ZCCHC17Q9NP64 241 aaKnown RBP13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 SAGE1Q9NXZ1 904 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 PLIN4Q96Q06 1357 aa13.83□□□□□ -0.2
TRAF3IP1-204ENST00000462122 C19orf81C9J6K1 198 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 PRDM1O75626 825 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 GUCY1A2P33402 732 aa13.82□□□□□ -0.2
TRAF3IP1-204ENST00000462122 BACE1P56817 501 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms