RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 MORF4L1Q9UBU8 362 aa21.78■■□□□ 1.08
SSB-206ENST00000461708 EXOC6BQ9Y2D4 811 aa21.78■■□□□ 1.08
SSB-206ENST00000461708 MYH1P12882 1939 aa21.78■■□□□ 1.08
SSB-206ENST00000461708 DYNLL1P63167 89 aaKnown RBP21.77■■□□□ 1.08
SSB-206ENST00000461708 MTMR2Q13614 643 aa21.77■■□□□ 1.08
SSB-206ENST00000461708 AACSQ86V21 672 aa21.77■■□□□ 1.08
SSB-206ENST00000461708 U2AF1L4Q8WU68 220 aaKnown RBP21.77■■□□□ 1.08
SSB-206ENST00000461708 UNC93B1Q9H1C4 597 aa21.77■■□□□ 1.08
SSB-206ENST00000461708 EHD4Q9H223 541 aa21.77■■□□□ 1.08
SSB-206ENST00000461708 TMOD4Q9NZQ9 345 aa21.77■■□□□ 1.08
SSB-206ENST00000461708 ZBTB21Q9ULJ3 1066 aa21.77■■□□□ 1.08
SSB-206ENST00000461708 USP17L10C9JJH3 530 aa21.76■■□□□ 1.07
SSB-206ENST00000461708 SGPL1O95470 568 aa21.76■■□□□ 1.07
SSB-206ENST00000461708 INHAP05111 366 aa21.76■■□□□ 1.07
SSB-206ENST00000461708 ELNP15502 786 aa21.76■■□□□ 1.07
SSB-206ENST00000461708 JAG1P78504 1218 aa21.76■■□□□ 1.07
SSB-206ENST00000461708 TATDN1Q6P1N9 297 aa21.76■■□□□ 1.07
SSB-206ENST00000461708 RPAP2Q8IXW5 612 aaPredicted RBP21.76■■□□□ 1.07
SSB-206ENST00000461708 MAGEB6Q8N7X4 407 aa21.76■■□□□ 1.07
SSB-206ENST00000461708 IRX3P78415 501 aaPredicted RBP21.75■■□□□ 1.07
SSB-206ENST00000461708 TTF1Q15361 905 aaPredicted RBP21.75■■□□□ 1.07
SSB-206ENST00000461708 RHPN1Q8TCX5 695 aa21.75■■□□□ 1.07
SSB-206ENST00000461708 HTATIP2Q9BUP3 242 aa21.75■■□□□ 1.07
SSB-206ENST00000461708 PAK6Q9NQU5 681 aaPredicted RBP21.75■■□□□ 1.07
SSB-206ENST00000461708 SAP30BPQ9UHR5 308 aaKnown RBP21.75■■□□□ 1.07
SSB-206ENST00000461708 H0YGN5 161 aa21.74■■□□□ 1.07
SSB-206ENST00000461708 TTC6Q86TZ1 520 aa21.74■■□□□ 1.07
SSB-206ENST00000461708 MIGA1Q8NAN2 632 aa21.74■■□□□ 1.07
SSB-206ENST00000461708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.74■■□□□ 1.07
SSB-206ENST00000461708 GTF3C2Q8WUA4 911 aaPredicted RBP21.74■■□□□ 1.07
SSB-206ENST00000461708 ANTXR1Q9H6X2 564 aa21.74■■□□□ 1.07
SSB-206ENST00000461708 SERPINB13Q9UIV8 391 aa21.74■■□□□ 1.07
SSB-206ENST00000461708 GJD2Q9UKL4 321 aa21.74■■□□□ 1.07
SSB-206ENST00000461708 DDX19BQ9UMR2 479 aa21.74■■□□□ 1.07
SSB-206ENST00000461708 HMMRO75330 724 aa21.73■■□□□ 1.07
SSB-206ENST00000461708 GDF11O95390 407 aa21.73■■□□□ 1.07
SSB-206ENST00000461708 USP5P45974 858 aa21.73■■□□□ 1.07
SSB-206ENST00000461708 CLASRPQ8N2M8 674 aaKnown RBP21.73■■□□□ 1.07
SSB-206ENST00000461708 KIF1BPQ96EK5 621 aa21.73■■□□□ 1.07
SSB-206ENST00000461708 CHMP4BQ9H444 224 aaKnown RBP21.73■■□□□ 1.07
SSB-206ENST00000461708 ZBTB40Q9NUA8 1239 aa21.73■■□□□ 1.07
SSB-206ENST00000461708 RANBP2P49792 3224 aaKnown RBP21.73■■□□□ 1.07
SSB-206ENST00000461708 FARP2O94887 1054 aaPredicted RBP21.72■■□□□ 1.07
SSB-206ENST00000461708 HERVK_113P62684 666 aa21.72■■□□□ 1.07
SSB-206ENST00000461708 P2RX7Q99572 595 aaKnown RBP21.72■■□□□ 1.07
SSB-206ENST00000461708 RIOK1Q9BRS2 568 aaKnown RBP21.72■■□□□ 1.07
SSB-206ENST00000461708 CRISPLD2Q9H0B8 497 aa21.72■■□□□ 1.07
SSB-206ENST00000461708 NDUFB9Q9Y6M9 179 aa21.72■■□□□ 1.07
SSB-206ENST00000461708 HMGCRP04035 888 aa21.71■■□□□ 1.07
SSB-206ENST00000461708 SHROOM1Q2M3G4 852 aaPredicted RBP21.71■■□□□ 1.07
SSB-206ENST00000461708 USP17L2Q6R6M4 530 aa21.71■■□□□ 1.07
SSB-206ENST00000461708 GPRC5AQ8NFJ5 357 aa21.71■■□□□ 1.07
SSB-206ENST00000461708 DPF3Q92784 378 aa21.71■■□□□ 1.07
SSB-206ENST00000461708 C12orf42Q96LP6 360 aa21.71■■□□□ 1.07
SSB-206ENST00000461708 IL1RAPL2Q9NP60 686 aa21.71■■□□□ 1.07
SSB-206ENST00000461708 COLQQ9Y215 455 aaPredicted RBP21.71■■□□□ 1.07
SSB-206ENST00000461708 RAB11FIP3O75154 756 aa21.7■■□□□ 1.06
SSB-206ENST00000461708 GH2P01242 217 aa21.7■■□□□ 1.06
SSB-206ENST00000461708 DEFB118Q96PH6 123 aa21.7■■□□□ 1.06
SSB-206ENST00000461708 EMILIN3Q9NT22 766 aa21.7■■□□□ 1.06
SSB-206ENST00000461708 TAOK2Q9UL54 1235 aa21.7■■□□□ 1.06
SSB-206ENST00000461708 PLXNB2O15031 1838 aa21.69■■□□□ 1.06
SSB-206ENST00000461708 MAGEB6P1A0A0J9YX57 407 aa21.69■■□□□ 1.06
SSB-206ENST00000461708 XRCC5P13010 732 aaKnown RBP21.69■■□□□ 1.06
SSB-206ENST00000461708 SIRT2Q8IXJ6 389 aa21.69■■□□□ 1.06
SSB-206ENST00000461708 RBPJLQ9UBG7 517 aa21.69■■□□□ 1.06
SSB-206ENST00000461708 DDX60LQ5H9U9 1706 aaKnown RBP21.69■■□□□ 1.06
SSB-206ENST00000461708 TFRCP02786 760 aaKnown RBP21.68■■□□□ 1.06
SSB-206ENST00000461708 PDE6AP16499 860 aa21.68■■□□□ 1.06
SSB-206ENST00000461708 MAPK4P31152 587 aa21.68■■□□□ 1.06
SSB-206ENST00000461708 USP14P54578 494 aa21.68■■□□□ 1.06
SSB-206ENST00000461708 CERKLQ49MI3 558 aaPredicted RBP21.68■■□□□ 1.06
SSB-206ENST00000461708 SLC9C2Q5TAH2 1124 aa21.68■■□□□ 1.06
SSB-206ENST00000461708 SOCS4Q8WXH5 440 aa21.68■■□□□ 1.06
SSB-206ENST00000461708 KIAA1683Q9H0B3 1180 aa21.68■■□□□ 1.06
SSB-206ENST00000461708 TXNRD2Q9NNW7 524 aa21.68■■□□□ 1.06
SSB-206ENST00000461708 NR2E3Q9Y5X4 410 aa21.68■■□□□ 1.06
SSB-206ENST00000461708 RPTORQ8N122 1335 aa21.67■■□□□ 1.06
SSB-206ENST00000461708 IFIT2P09913 472 aaKnown RBP21.67■■□□□ 1.06
SSB-206ENST00000461708 FXR1P51114 621 aaKnown RBP eCLIP21.67■■□□□ 1.06
SSB-206ENST00000461708 ABCB5Q2M3G0 1257 aa21.67■■□□□ 1.06
SSB-206ENST00000461708 TRMT44Q8IYL2 757 aaKnown RBP21.67■■□□□ 1.06
SSB-206ENST00000461708 ANKLE1Q8NAG6 615 aa21.67■■□□□ 1.06
SSB-206ENST00000461708 CRNKL1Q9BZJ0 848 aaKnown RBP21.67■■□□□ 1.06
SSB-206ENST00000461708 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.67■■□□□ 1.06
SSB-206ENST00000461708 COG6Q9Y2V7 657 aa21.67■■□□□ 1.06
SSB-206ENST00000461708 USP17L15C9J2P7 530 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 USP17L13C9JLJ4 530 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 USP17L11C9JVI0 530 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 USP17L18D6R9N7 530 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 USP17L22D6RA61 530 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 USP17L17D6RBQ6 530 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 USP17L19D6RCP7 530 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 USP17L20D6RJB6 530 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 SHMT1P34896 483 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 ERVK-9P63128 1117 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 ERVK-24P63145 666 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 GABPAQ06546 454 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 USP17L24Q0WX57 530 aa21.66■■□□□ 1.06
SSB-206ENST00000461708 NUDT12Q9BQG2 462 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms