RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 EPB41L4AQ9HCS5 686 aaPredicted RBP17.96■□□□□ 0.47
TMEM39A-203ENST00000461654 LAMB1P07942 1786 aa17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 E7EWF7 191 aa17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 SLC3A2P08195 630 aaKnown RBP17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 GJA5P36382 358 aa17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 ADCK5Q3MIX3 580 aa17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 DCAF15Q66K64 600 aa17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 IDI2Q9BXS1 227 aa17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 RNF41Q9H4P4 317 aaPredicted RBP17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 PDRG1Q9NUG6 133 aa17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 USP40Q9NVE5 1235 aa17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 ARPP21Q9UBL0 812 aaPredicted RBP17.95■□□□□ 0.46
TMEM39A-203ENST00000461654 MINDY4BA8MYZ0 360 aa17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 GPR25O00155 361 aa17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 VGLL4Q14135 290 aa17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 NCOA7Q8NI08 942 aa17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 ZNF296Q8WUU4 475 aaPredicted RBP17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 OPTNQ96CV9 577 aa17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 TBC1D2Q9BYX2 928 aa17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 ELP3Q9H9T3 547 aa17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 DCP1AQ9NPI6 582 aaPredicted RBP17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 CSADQ9Y600 493 aa17.94■□□□□ 0.46
TMEM39A-203ENST00000461654 SPDYE5A6NIY4 337 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 ENTPD3O75355 529 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 RPS6KB1P23443 525 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 PPARAQ07869 468 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 NFIAQ12857 509 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 ANKRD1Q15327 319 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 OTUD7BQ6GQQ9 843 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 TGFBRAP1Q8WUH2 860 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 MS4A4AQ96JQ5 239 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 CNNM2Q9H8M5 875 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 MCM9Q9NXL9 1143 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 FAM198AQ9UFP1 575 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 ZNF112Q9UJU3 913 aa17.93■□□□□ 0.46
TMEM39A-203ENST00000461654 K7ELQ4 463 aaPredicted RBP17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 IGF2BP3O00425 579 aaKnown RBP eCLIP17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 PCP11498 1178 aaKnown RBP17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 FGD1P98174 961 aa17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 SBK1Q52WX2 424 aa17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 MFSD6Q6ZSS7 791 aa17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 DHX32Q7L7V1 743 aaKnown RBP17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 CTU1Q7Z7A3 348 aaKnown RBP17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 ERO1BQ86YB8 467 aa17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 ZNF341Q9BYN7 854 aa17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 KRT23Q9C075 422 aa17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 TAF6LQ9Y6J9 622 aa17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 MYH2Q9UKX2 1941 aa17.92■□□□□ 0.46
TMEM39A-203ENST00000461654 USP17L12C9JPN9 530 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 USP17L21D6R901 530 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 POLR3DP05423 398 aaPredicted RBP17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 HSP90AA1P07900 732 aaKnown RBP17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 RHBDL3P58872 404 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 TCP10Q12799 353 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 PKN2Q16513 984 aaKnown RBP17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 AKNAD1Q5T1N1 836 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 CTR9Q6PD62 1173 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 STOX1Q6ZVD7 989 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 MAPKAPK5Q8IW41 473 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 WRNIP1Q96S55 665 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 PTPN18Q99952 460 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 TOMM22Q9NS69 142 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 ANAPC4Q9UJX5 808 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 SNCAIPQ9Y6H5 919 aa17.91■□□□□ 0.46
TMEM39A-203ENST00000461654 OTOFQ9HC10 1997 aa17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 CPA1P15085 419 aa17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 MCM5P33992 734 aa17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 GTF2A2P52657 109 aa17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 MAP3K10Q02779 954 aa17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 CTDSPL2Q05D32 466 aa17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 TBC1D10CQ8IV04 446 aa17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 STAG1Q8WVM7 1258 aa17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 ALDH8A1Q9H2A2 487 aaPredicted RBP17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 R3HDMLQ9H3Y0 253 aa17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.9■□□□□ 0.46
TMEM39A-203ENST00000461654 CCDC85CA6NKD9 419 aa17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 FKTNO75072 461 aa17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 WDHD1O75717 1129 aaPredicted RBP17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 AK2P54819 239 aa17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 PDE4BQ07343 736 aa17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 MIGA2Q7L4E1 593 aa17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 ZFPM1Q8IX07 1006 aa17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 ZKSCAN4Q969J2 545 aaPredicted RBP17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 TTC14Q96N46 770 aa17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 ZNF287Q9HBT7 754 aa17.89■□□□□ 0.45
TMEM39A-203ENST00000461654 NT5C2P49902 561 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 PPATQ06203 517 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 PICALMQ13492 652 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 TTC6Q86TZ1 520 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 BRI3BPQ8WY22 251 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 OTUD5Q96G74 571 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 ZSCAN31Q96LW9 406 aaPredicted RBP17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 LIMCH1Q9UPQ0 1083 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 FLT1P17948 1338 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 WDR19Q8NEZ3 1342 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 ATRNL1Q5VV63 1379 aa17.88■□□□□ 0.45
TMEM39A-203ENST00000461654 CD2BP2O95400 341 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 INPP5BP32019 993 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms