RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
DHFR2-203ENST00000461173 COL4A1P02462 1669 aa11.34□□□□□ -0.59
DHFR2-203ENST00000461173 KIAA1551Q9HCM1 1747 aa11.33□□□□□ -0.59
DHFR2-203ENST00000461173 SKILP12757 684 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 TROAPQ12815 778 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 TBC1D9BQ66K14 1250 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 SPTY2D1Q68D10 685 aaPredicted RBP11.33□□□□□ -0.6
DHFR2-203ENST00000461173 OLFM4Q6UX06 510 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 TPTE2Q6XPS3 522 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 FAM177A1Q8N128 213 aaPredicted RBP11.33□□□□□ -0.6
DHFR2-203ENST00000461173 FNBP4Q8N3X1 1017 aaPredicted RBP11.33□□□□□ -0.6
DHFR2-203ENST00000461173 CNNM3Q8NE01 707 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 SDR42E1Q8WUS8 393 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 CELF1Q92879 486 aaKnown RBP11.33□□□□□ -0.6
DHFR2-203ENST00000461173 CRNKL1Q9BZJ0 848 aaKnown RBP11.33□□□□□ -0.6
DHFR2-203ENST00000461173 ARPP21Q9UBL0 812 aaPredicted RBP11.33□□□□□ -0.6
DHFR2-203ENST00000461173 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 CASZ1Q86V15 1759 aa11.33□□□□□ -0.6
DHFR2-203ENST00000461173 A0A0G2JS52 829 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 MINDY4BA8MYZ0 360 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 TRAPPC10P48553 1259 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 SARSP49591 514 aaKnown RBP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 IFIT1BQ5T764 474 aaKnown RBP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 CTR9Q6PD62 1173 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 NYAP1Q6ZVC0 841 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 METTL16Q86W50 562 aaKnown RBP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 CERS3Q8IU89 383 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 MLKLQ8NB16 471 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 SPATA20Q8TB22 786 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 ZNF384Q8TF68 577 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 FERMT2Q96AC1 680 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 PHF20Q9BVI0 1012 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 HSD3B7Q9H2F3 369 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 AATFQ9NY61 560 aaKnown RBP eCLIP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 IRS2Q9Y4H2 1338 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 PSDA5PKW4 1024 aaPredicted RBP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 TNNT1P13805 278 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 KRT2P35908 639 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 PKN1Q16512 942 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 LONRF3Q496Y0 759 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 CCDC178Q5BJE1 867 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 C15orf52Q6ZUT6 534 aaKnown RBP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 CCDC112Q8NEF3 446 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 ANKS1AQ92625 1134 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 PYM1Q9BRP8 204 aaKnown RBP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 XPO4Q9C0E2 1151 aaKnown RBP11.32□□□□□ -0.6
DHFR2-203ENST00000461173 BRMS1Q9HCU9 246 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 NHSQ6T4R5 1651 aa11.32□□□□□ -0.6
DHFR2-203ENST00000461173 TRIM75PA6NK02 468 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 CCP110O43303 1012 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 ZPR1O75312 459 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 FANCCQ00597 558 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 TMTC3Q6ZXV5 915 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 NBPF5PQ86XG9 351 aaPredicted RBP11.31□□□□□ -0.6
DHFR2-203ENST00000461173 NUP133Q8WUM0 1156 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 ERCC4Q92889 916 aaPredicted RBP11.31□□□□□ -0.6
DHFR2-203ENST00000461173 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 ZKSCAN3Q9BRR0 538 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 DCP1AQ9NPI6 582 aaPredicted RBP11.31□□□□□ -0.6
DHFR2-203ENST00000461173 IFNKQ9P0W0 207 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 LEMD3Q9Y2U8 911 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 PCDHA5Q9Y5H7 936 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 MYH6P13533 1939 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 LAMB1P07942 1786 aa11.31□□□□□ -0.6
DHFR2-203ENST00000461173 MYH2Q9UKX2 1941 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 MYH13Q9UKX3 1938 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 TM4SF1P30408 202 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 MECOMQ03112 1051 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 POSTNQ15063 836 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 TPD52L1Q16890 204 aaPredicted RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 FILIP1Q7Z7B0 1213 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 CCAR2Q8N163 923 aaKnown RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 ENOX1Q8TC92 643 aaKnown RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 KCNJ14Q9UNX9 436 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 RTCBQ9Y3I0 505 aaKnown RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 ROBO3Q96MS0 1386 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 CCDC88AQ3V6T2 1871 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 A0A087WWV3 80 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 NUTM2BA6NNL0 878 aaPredicted RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 NUTM2EB1AL46 878 aaPredicted RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 USP17L12C9JPN9 530 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 USP17L21D6R901 530 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 UBE2Q2LH0YL09 131 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 BIN1O00499 593 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 SMC2O95347 1197 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 ERCC5P28715 1186 aaPredicted RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 DYNLL1P63167 89 aaKnown RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 PDE4BQ07343 736 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 PNOCQ13519 176 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 MORC3Q14149 939 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 NUTM2AQ8IVF1 878 aaPredicted RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 FOXP4Q8IVH2 680 aaPredicted RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 WDR66Q8TBY9 1149 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms