RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PAGR1Q9BTK6 254 aa21.27■■□□□ 1
TOP3A-202ENST00000461127 PRDM6Q9NQX0 595 aa21.27■■□□□ 1
TOP3A-202ENST00000461127 PI4KBQ9UBF8 816 aa21.27■■□□□ 1
TOP3A-202ENST00000461127 GLRX3O76003 335 aaKnown RBP21.26■□□□□ 0.99
TOP3A-202ENST00000461127 TIMM10P62072 90 aa21.26■□□□□ 0.99
TOP3A-202ENST00000461127 RRP1BQ14684 758 aaKnown RBP21.26■□□□□ 0.99
TOP3A-202ENST00000461127 MORN1Q5T089 497 aa21.26■□□□□ 0.99
TOP3A-202ENST00000461127 TEX11Q8IYF3 940 aa21.26■□□□□ 0.99
TOP3A-202ENST00000461127 CDX2Q99626 313 aaPredicted RBP21.26■□□□□ 0.99
TOP3A-202ENST00000461127 NOL10Q9BSC4 688 aaKnown RBP21.26■□□□□ 0.99
TOP3A-202ENST00000461127 PORCNQ9H237 461 aa21.26■□□□□ 0.99
TOP3A-202ENST00000461127 DHX36Q9H2U1 1008 aaKnown RBP21.26■□□□□ 0.99
TOP3A-202ENST00000461127 RBPJLQ9UBG7 517 aa21.26■□□□□ 0.99
TOP3A-202ENST00000461127 AKAP2Q9Y2D5 859 aa21.26■□□□□ 0.99
TOP3A-202ENST00000461127 USP17L10C9JJH3 530 aa21.25■□□□□ 0.99
TOP3A-202ENST00000461127 MSCO60682 206 aa21.25■□□□□ 0.99
TOP3A-202ENST00000461127 PEX10O60683 326 aa21.25■□□□□ 0.99
TOP3A-202ENST00000461127 TRIM34Q9BYJ4 488 aa21.25■□□□□ 0.99
TOP3A-202ENST00000461127 GINM1Q9NU53 330 aa21.25■□□□□ 0.99
TOP3A-202ENST00000461127 PA2G4Q9UQ80 394 aaKnown RBP21.25■□□□□ 0.99
TOP3A-202ENST00000461127 MAST2Q6P0Q8 1798 aa21.24■□□□□ 0.99
TOP3A-202ENST00000461127 A0A1B0GUL7 405 aa21.24■□□□□ 0.99
TOP3A-202ENST00000461127 ATN1P54259 1190 aaPredicted RBP21.24■□□□□ 0.99
TOP3A-202ENST00000461127 MAP2K5Q13163 448 aa21.24■□□□□ 0.99
TOP3A-202ENST00000461127 Q3C1V9 767 aa21.24■□□□□ 0.99
TOP3A-202ENST00000461127 SSH1Q8WYL5 1049 aa21.24■□□□□ 0.99
TOP3A-202ENST00000461127 SYMPKQ92797 1274 aaKnown RBP21.24■□□□□ 0.99
TOP3A-202ENST00000461127 NSUN4Q96CB9 384 aaKnown RBP21.24■□□□□ 0.99
TOP3A-202ENST00000461127 EDC3Q96F86 508 aaKnown RBP21.24■□□□□ 0.99
TOP3A-202ENST00000461127 XAGE2Q96GT9 111 aa21.24■□□□□ 0.99
TOP3A-202ENST00000461127 COPRSQ9NQ92 184 aa21.24■□□□□ 0.99
TOP3A-202ENST00000461127 RAI14Q9P0K7 980 aa21.24■□□□□ 0.99
TOP3A-202ENST00000461127 EYSQ5T1H1 3165 aa21.24■□□□□ 0.99
TOP3A-202ENST00000461127 CCNA1P78396 465 aa21.23■□□□□ 0.99
TOP3A-202ENST00000461127 CRACR2BQ8N4Y2 399 aaPredicted RBP21.23■□□□□ 0.99
TOP3A-202ENST00000461127 ZNF384Q8TF68 577 aa21.23■□□□□ 0.99
TOP3A-202ENST00000461127 SEMA6BQ9H3T3 888 aa21.23■□□□□ 0.99
TOP3A-202ENST00000461127 DDX20Q9UHI6 824 aaKnown RBP21.23■□□□□ 0.99
TOP3A-202ENST00000461127 FRMPD3Q5JV73 1810 aa21.22■□□□□ 0.99
TOP3A-202ENST00000461127 DNM1LO00429 736 aa21.22■□□□□ 0.99
TOP3A-202ENST00000461127 CNGA1P29973 690 aa21.22■□□□□ 0.99
TOP3A-202ENST00000461127 RTP1P59025 263 aa21.22■□□□□ 0.99
TOP3A-202ENST00000461127 LPAR1Q92633 364 aa21.22■□□□□ 0.99
TOP3A-202ENST00000461127 TTC28Q96AY4 2481 aa21.21■□□□□ 0.99
TOP3A-202ENST00000461127 PRUNE2Q8WUY3 3088 aa21.21■□□□□ 0.99
TOP3A-202ENST00000461127 GORABQ5T7V8 394 aa21.21■□□□□ 0.99
TOP3A-202ENST00000461127 SPATA5Q8NB90 893 aa21.21■□□□□ 0.99
TOP3A-202ENST00000461127 NEUROD6Q96NK8 337 aa21.21■□□□□ 0.99
TOP3A-202ENST00000461127 HMG20BQ9P0W2 317 aa21.21■□□□□ 0.99
TOP3A-202ENST00000461127 RABGAP1Q9Y3P9 1069 aa21.21■□□□□ 0.99
TOP3A-202ENST00000461127 BAG3O95817 575 aa21.2■□□□□ 0.98
TOP3A-202ENST00000461127 PLCG2P16885 1265 aa21.2■□□□□ 0.98
TOP3A-202ENST00000461127 ATP2B2Q01814 1243 aa21.2■□□□□ 0.98
TOP3A-202ENST00000461127 WDR78Q5VTH9 848 aa21.2■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L2Q6R6M4 530 aa21.2■□□□□ 0.98
TOP3A-202ENST00000461127 FOXP4Q8IVH2 680 aaPredicted RBP21.2■□□□□ 0.98
TOP3A-202ENST00000461127 LRP2BPQ9P2M1 347 aa21.2■□□□□ 0.98
TOP3A-202ENST00000461127 ATP11BQ9Y2G3 1177 aa21.2■□□□□ 0.98
TOP3A-202ENST00000461127 IVNS1ABPQ9Y6Y0 642 aa21.2■□□□□ 0.98
TOP3A-202ENST00000461127 SHHQ15465 462 aa21.19■□□□□ 0.98
TOP3A-202ENST00000461127 TBC1D9Q6ZT07 1266 aa21.19■□□□□ 0.98
TOP3A-202ENST00000461127 SH3RF3Q8TEJ3 882 aaPredicted RBP21.19■□□□□ 0.98
TOP3A-202ENST00000461127 MYLIPQ8WY64 445 aa21.19■□□□□ 0.98
TOP3A-202ENST00000461127 ZBTB21Q9ULJ3 1066 aa21.19■□□□□ 0.98
TOP3A-202ENST00000461127 SLC15A5A6NIM6 579 aa21.18■□□□□ 0.98
TOP3A-202ENST00000461127 GDF11O95390 407 aa21.18■□□□□ 0.98
TOP3A-202ENST00000461127 FOSL2P15408 326 aa21.18■□□□□ 0.98
TOP3A-202ENST00000461127 SMAD3P84022 425 aaKnown RBP21.18■□□□□ 0.98
TOP3A-202ENST00000461127 TFCP2Q12800 502 aa21.18■□□□□ 0.98
TOP3A-202ENST00000461127 ALDH1L2Q3SY69 923 aa21.18■□□□□ 0.98
TOP3A-202ENST00000461127 ARRDC4Q8NCT1 418 aa21.18■□□□□ 0.98
TOP3A-202ENST00000461127 PRDM5Q9NQX1 630 aaPredicted RBP21.18■□□□□ 0.98
TOP3A-202ENST00000461127 SPTBN5Q9NRC6 3674 aaKnown RBP21.18■□□□□ 0.98
TOP3A-202ENST00000461127 PI16Q6UXB8 463 aa21.17■□□□□ 0.98
TOP3A-202ENST00000461127 ATF7IPQ6VMQ6 1270 aa21.17■□□□□ 0.98
TOP3A-202ENST00000461127 EMILIN3Q9NT22 766 aa21.17■□□□□ 0.98
TOP3A-202ENST00000461127 SMC4Q9NTJ3 1288 aa21.17■□□□□ 0.98
TOP3A-202ENST00000461127 FLRT1Q9NZU1 646 aa21.17■□□□□ 0.98
TOP3A-202ENST00000461127 LTBP2Q14767 1821 aa21.17■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L15C9J2P7 530 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L13C9JLJ4 530 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 KBTBD13C9JR72 458 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L11C9JVI0 530 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L18D6R9N7 530 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L22D6RA61 530 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L17D6RBQ6 530 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L19D6RCP7 530 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L20D6RJB6 530 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 PTPREP23469 700 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 JAG1P78504 1218 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 USP17L24Q0WX57 530 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 C9orf50Q5SZB4 431 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 METTL16Q86W50 562 aaKnown RBP21.16■□□□□ 0.98
TOP3A-202ENST00000461127 FAM9BQ8IZU0 186 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 TGFBRAP1Q8WUH2 860 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 FEZ1Q99689 392 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 AATFQ9NY61 560 aaKnown RBP eCLIP21.16■□□□□ 0.98
TOP3A-202ENST00000461127 NDUFB9Q9Y6M9 179 aa21.16■□□□□ 0.98
TOP3A-202ENST00000461127 HLA-DOAP06340 250 aa21.15■□□□□ 0.98
TOP3A-202ENST00000461127 HOXC6P09630 235 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms