RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 CRACR2BQ8N4Y2 399 aaPredicted RBP26.89■■□□□ 1.9
HMG20B-207ENST00000461099 GINM1Q9NU53 330 aa26.89■■□□□ 1.9
HMG20B-207ENST00000461099 TRIM34Q9BYJ4 488 aa26.88■■□□□ 1.89
HMG20B-207ENST00000461099 PALD1Q9ULE6 856 aa26.88■■□□□ 1.89
HMG20B-207ENST00000461099 ALPK3Q96L96 1907 aa26.87■■□□□ 1.89
HMG20B-207ENST00000461099 USP17L10C9JJH3 530 aa26.87■■□□□ 1.89
HMG20B-207ENST00000461099 IGSF3O75054 1194 aa26.87■■□□□ 1.89
HMG20B-207ENST00000461099 HERVK_113P62684 666 aa26.87■■□□□ 1.89
HMG20B-207ENST00000461099 OS9Q13438 667 aaPredicted RBP26.87■■□□□ 1.89
HMG20B-207ENST00000461099 TMEM57Q8N5G2 664 aa26.87■■□□□ 1.89
HMG20B-207ENST00000461099 GPRC5AQ8NFJ5 357 aa26.87■■□□□ 1.89
HMG20B-207ENST00000461099 SSH3Q8TE77 659 aa26.87■■□□□ 1.89
HMG20B-207ENST00000461099 TRIB2Q92519 343 aa26.87■■□□□ 1.89
HMG20B-207ENST00000461099 ZNF512BQ96KM6 892 aaPredicted RBP26.87■■□□□ 1.89
HMG20B-207ENST00000461099 PLXNB2O15031 1838 aa26.87■■□□□ 1.89
HMG20B-207ENST00000461099 MAST2Q6P0Q8 1798 aa26.86■■□□□ 1.89
HMG20B-207ENST00000461099 CYP2B6P20813 491 aa26.86■■□□□ 1.89
HMG20B-207ENST00000461099 ATP8B2P98198 1209 aa26.86■■□□□ 1.89
HMG20B-207ENST00000461099 SHROOM1Q2M3G4 852 aaPredicted RBP26.86■■□□□ 1.89
HMG20B-207ENST00000461099 CDK5RAP2Q96SN8 1893 aa26.86■■□□□ 1.89
HMG20B-207ENST00000461099 NBPF3Q9H094 633 aa26.86■■□□□ 1.89
HMG20B-207ENST00000461099 TXNRD2Q9NNW7 524 aa26.86■■□□□ 1.89
HMG20B-207ENST00000461099 PEX10O60683 326 aa26.85■■□□□ 1.89
HMG20B-207ENST00000461099 GDF11O95390 407 aa26.85■■□□□ 1.89
HMG20B-207ENST00000461099 XRCC5P13010 732 aaKnown RBP26.85■■□□□ 1.89
HMG20B-207ENST00000461099 ZAP70P43403 619 aa26.85■■□□□ 1.89
HMG20B-207ENST00000461099 NUDT12Q9BQG2 462 aa26.85■■□□□ 1.89
HMG20B-207ENST00000461099 SAP30BPQ9UHR5 308 aaKnown RBP26.85■■□□□ 1.89
HMG20B-207ENST00000461099 ZBTB21Q9ULJ3 1066 aa26.85■■□□□ 1.89
HMG20B-207ENST00000461099 FOCADQ5VW36 1801 aa26.85■■□□□ 1.89
HMG20B-207ENST00000461099 SURF6O75683 361 aaKnown RBP26.84■■□□□ 1.89
HMG20B-207ENST00000461099 MNX1P50219 401 aaPredicted RBP26.84■■□□□ 1.89
HMG20B-207ENST00000461099 MAP3K21Q5TCX8 1036 aa26.84■■□□□ 1.89
HMG20B-207ENST00000461099 C7orf61Q8IZ16 206 aa26.84■■□□□ 1.89
HMG20B-207ENST00000461099 SOCS4Q8WXH5 440 aa26.84■■□□□ 1.89
HMG20B-207ENST00000461099 PIH1D3Q9NQM4 214 aaKnown RBP26.84■■□□□ 1.89
HMG20B-207ENST00000461099 RBPJLQ9UBG7 517 aa26.84■■□□□ 1.89
HMG20B-207ENST00000461099 OGDHLQ9ULD0 1010 aa26.84■■□□□ 1.89
HMG20B-207ENST00000461099 SOX1O00570 391 aaPredicted RBP26.83■■□□□ 1.89
HMG20B-207ENST00000461099 HLA-DOAP06340 250 aa26.83■■□□□ 1.89
HMG20B-207ENST00000461099 MAPK4P31152 587 aa26.83■■□□□ 1.89
HMG20B-207ENST00000461099 ZKSCAN2Q63HK3 967 aa26.83■■□□□ 1.89
HMG20B-207ENST00000461099 MYO5AQ9Y4I1 1855 aaKnown RBP26.83■■□□□ 1.88
HMG20B-207ENST00000461099 PRKAR2AP13861 404 aaKnown RBP26.82■■□□□ 1.88
HMG20B-207ENST00000461099 BMP8BP34820 402 aa26.82■■□□□ 1.88
HMG20B-207ENST00000461099 DYNLL1P63167 89 aaKnown RBP26.82■■□□□ 1.88
HMG20B-207ENST00000461099 TRMT44Q8IYL2 757 aaKnown RBP26.82■■□□□ 1.88
HMG20B-207ENST00000461099 GDF15Q99988 308 aa26.82■■□□□ 1.88
HMG20B-207ENST00000461099 C11orf49Q9H6J7 331 aa26.82■■□□□ 1.88
HMG20B-207ENST00000461099 CYP7A1P22680 504 aa26.81■■□□□ 1.88
HMG20B-207ENST00000461099 ERVK-9P63128 1117 aa26.81■■□□□ 1.88
HMG20B-207ENST00000461099 ERVK-24P63145 666 aa26.81■■□□□ 1.88
HMG20B-207ENST00000461099 PDE3AQ14432 1141 aa26.81■■□□□ 1.88
HMG20B-207ENST00000461099 Q3C1V9 767 aa26.81■■□□□ 1.88
HMG20B-207ENST00000461099 CCAR1Q8IX12 1150 aaKnown RBP26.81■■□□□ 1.88
HMG20B-207ENST00000461099 GTF3C2Q8WUA4 911 aaPredicted RBP26.81■■□□□ 1.88
HMG20B-207ENST00000461099 EMILIN3Q9NT22 766 aa26.81■■□□□ 1.88
HMG20B-207ENST00000461099 DBNLQ9UJU6 430 aaKnown RBP26.81■■□□□ 1.88
HMG20B-207ENST00000461099 NOP58Q9Y2X3 529 aaKnown RBP26.81■■□□□ 1.88
HMG20B-207ENST00000461099 COL6A3P12111 3177 aa26.8■■□□□ 1.88
HMG20B-207ENST00000461099 USP17L2Q6R6M4 530 aa26.8■■□□□ 1.88
HMG20B-207ENST00000461099 USP6NLQ92738 828 aa26.8■■□□□ 1.88
HMG20B-207ENST00000461099 LRCH3Q96II8 777 aa26.8■■□□□ 1.88
HMG20B-207ENST00000461099 ZMYND8Q9ULU4 1186 aaPredicted RBP26.8■■□□□ 1.88
HMG20B-207ENST00000461099 PAGR1Q9BTK6 254 aa26.79■■□□□ 1.88
HMG20B-207ENST00000461099 PORCNQ9H237 461 aa26.79■■□□□ 1.88
HMG20B-207ENST00000461099 C1orf115Q9H7X2 142 aa26.79■■□□□ 1.88
HMG20B-207ENST00000461099 DDX60LQ5H9U9 1706 aaKnown RBP26.79■■□□□ 1.88
HMG20B-207ENST00000461099 GH2P01242 217 aa26.78■■□□□ 1.88
HMG20B-207ENST00000461099 ZKSCAN1P17029 563 aaPredicted RBP26.78■■□□□ 1.88
HMG20B-207ENST00000461099 CACNB2Q08289 660 aaPredicted RBP26.78■■□□□ 1.88
HMG20B-207ENST00000461099 POTEEQ6S8J3 1075 aa26.78■■□□□ 1.88
HMG20B-207ENST00000461099 GPR142Q7Z601 462 aa26.78■■□□□ 1.88
HMG20B-207ENST00000461099 CCDC8Q9H0W5 538 aaPredicted RBP26.78■■□□□ 1.88
HMG20B-207ENST00000461099 TLR7Q9NYK1 1049 aaKnown RBP26.78■■□□□ 1.88
HMG20B-207ENST00000461099 IDH1O75874 414 aaKnown RBP26.77■■□□□ 1.88
HMG20B-207ENST00000461099 MORN1Q5T089 497 aa26.77■■□□□ 1.88
HMG20B-207ENST00000461099 TATDN1Q6P1N9 297 aa26.77■■□□□ 1.88
HMG20B-207ENST00000461099 PLEKHH3Q7Z736 793 aa26.77■■□□□ 1.88
HMG20B-207ENST00000461099 CERS3Q8IU89 383 aa26.77■■□□□ 1.88
HMG20B-207ENST00000461099 MIGA1Q8NAN2 632 aa26.77■■□□□ 1.88
HMG20B-207ENST00000461099 RGS2P41220 211 aa26.76■■□□□ 1.87
HMG20B-207ENST00000461099 USP5P45974 858 aa26.76■■□□□ 1.87
HMG20B-207ENST00000461099 EAF2Q96CJ1 260 aaPredicted RBP26.76■■□□□ 1.87
HMG20B-207ENST00000461099 MYH1P12882 1939 aa26.75■■□□□ 1.87
HMG20B-207ENST00000461099 PFASO15067 1338 aa26.75■■□□□ 1.87
HMG20B-207ENST00000461099 SYN1P17600 705 aa26.75■■□□□ 1.87
HMG20B-207ENST00000461099 CCL14Q16627 93 aa26.75■■□□□ 1.87
HMG20B-207ENST00000461099 C12orf42Q96LP6 360 aa26.75■■□□□ 1.87
HMG20B-207ENST00000461099 SERPINB13Q9UIV8 391 aa26.75■■□□□ 1.87
HMG20B-207ENST00000461099 RABGAP1Q9Y3P9 1069 aa26.75■■□□□ 1.87
HMG20B-207ENST00000461099 USP17L15C9J2P7 530 aa26.74■■□□□ 1.87
HMG20B-207ENST00000461099 USP17L13C9JLJ4 530 aa26.74■■□□□ 1.87
HMG20B-207ENST00000461099 USP17L11C9JVI0 530 aa26.74■■□□□ 1.87
HMG20B-207ENST00000461099 USP17L18D6R9N7 530 aa26.74■■□□□ 1.87
HMG20B-207ENST00000461099 USP17L22D6RA61 530 aa26.74■■□□□ 1.87
HMG20B-207ENST00000461099 USP17L17D6RBQ6 530 aa26.74■■□□□ 1.87
HMG20B-207ENST00000461099 USP17L19D6RCP7 530 aa26.74■■□□□ 1.87
HMG20B-207ENST00000461099 USP17L20D6RJB6 530 aa26.74■■□□□ 1.87
HMG20B-207ENST00000461099 USP17L24Q0WX57 530 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms