RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 ATP6V0A2Q9Y487 856 aa7.31□□□□□ -1.24
NUP98-208ENST00000461047 NUP98P52948 1817 aa7.31□□□□□ -1.24
NUP98-208ENST00000461047 ABCC12Q96J65 1359 aa7.31□□□□□ -1.24
NUP98-208ENST00000461047 CASZ1Q86V15 1759 aa7.31□□□□□ -1.24
NUP98-208ENST00000461047 SKIP12755 728 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 MX2P20592 715 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 HDAC1Q13547 482 aaPredicted RBP7.3□□□□□ -1.24
NUP98-208ENST00000461047 GAS6Q14393 721 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 GPR162Q16538 588 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 C4orf17Q53FE4 359 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 CCDC93Q567U6 631 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 METTL24Q5JXM2 366 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 PRPF40BQ6NWY9 871 aaKnown RBP7.3□□□□□ -1.24
NUP98-208ENST00000461047 DPP8Q6V1X1 898 aaPredicted RBP7.3□□□□□ -1.24
NUP98-208ENST00000461047 GCC1Q96CN9 775 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 KAZALD1Q96I82 304 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 EYA3Q99504 573 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 SEC31BQ9NQW1 1179 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 PPP4R2Q9NY27 417 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 LEMD3Q9Y2U8 911 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 HRH3Q9Y5N1 445 aa7.3□□□□□ -1.24
NUP98-208ENST00000461047 XDHP47989 1333 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 PNMA6EA0A0J9YXQ4 647 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 C21orf2O43822 256 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 STAU1O95793 577 aaKnown RBP7.29□□□□□ -1.24
NUP98-208ENST00000461047 INHAP05111 366 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 IFIT1P09914 478 aaKnown RBP7.29□□□□□ -1.24
NUP98-208ENST00000461047 ATP2B4P23634 1241 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 PTPN12Q05209 780 aaKnown RBP7.29□□□□□ -1.24
NUP98-208ENST00000461047 EFHC2Q5JST6 749 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 GORABQ5T7V8 394 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 CLASRPQ8N2M8 674 aaKnown RBP7.29□□□□□ -1.24
NUP98-208ENST00000461047 WHAMMQ8TF30 809 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 CELF1Q92879 486 aaKnown RBP7.29□□□□□ -1.24
NUP98-208ENST00000461047 KIF1BPQ96EK5 621 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 ZNF594Q96JF6 807 aaPredicted RBP7.29□□□□□ -1.24
NUP98-208ENST00000461047 LRRCC1Q9C099 1032 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 ZC3H12CQ9C0D7 883 aaKnown RBP7.29□□□□□ -1.24
NUP98-208ENST00000461047 SIL1Q9H173 461 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 VPS33BQ9H267 617 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 DCTPP1Q9H773 170 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 GGA1Q9UJY5 639 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 NOD1Q9Y239 953 aa7.29□□□□□ -1.24
NUP98-208ENST00000461047 NOP58Q9Y2X3 529 aaKnown RBP7.29□□□□□ -1.24
NUP98-208ENST00000461047 ANKRD36CQ5JPF3 1778 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 LZTS3O60299 673 aaPredicted RBP7.28□□□□□ -1.24
NUP98-208ENST00000461047 PDE8BO95263 885 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 SLC5A1P13866 664 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 KCNA3P22001 575 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 RFX5P48382 616 aaPredicted RBP7.28□□□□□ -1.24
NUP98-208ENST00000461047 KCNMA1Q12791 1236 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 LBRQ14739 615 aaKnown RBP7.28□□□□□ -1.24
NUP98-208ENST00000461047 CAVIN4Q5BKX8 364 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 TBC1D9Q6ZT07 1266 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 ARHGAP27Q6ZUM4 889 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 VPS37DQ86XT2 251 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 NLGN2Q8NFZ4 835 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 POM121Q96HA1 1249 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 GPATCH3Q96I76 525 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 NIFKQ9BYG3 293 aaKnown RBP7.28□□□□□ -1.24
NUP98-208ENST00000461047 GPR108Q9NPR9 543 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 GNL3LQ9NVN8 582 aaKnown RBP7.28□□□□□ -1.24
NUP98-208ENST00000461047 MINPP1Q9UNW1 487 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 RIPOR2Q9Y4F9 1068 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 TUBGCP6Q96RT7 1819 aa7.28□□□□□ -1.24
NUP98-208ENST00000461047 COL24A1Q17RW2 1714 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 CELA2BP08218 269 aaPredicted RBP7.27□□□□□ -1.25
NUP98-208ENST00000461047 IFIT2P09913 472 aaKnown RBP7.27□□□□□ -1.25
NUP98-208ENST00000461047 MSX1P28360 303 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 PLA2G4AP47712 749 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 SCNN1DP51172 638 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 CHRNDQ07001 517 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 UBE4AQ14139 1066 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 PUM3Q15397 648 aaKnown RBP7.27□□□□□ -1.25
NUP98-208ENST00000461047 CCDC158Q5M9N0 1113 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 ANKRD45Q5TZF3 282 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 LYPD4Q6UWN0 246 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 CENPQQ7L2Z9 268 aaPredicted RBP7.27□□□□□ -1.25
NUP98-208ENST00000461047 JDP2Q8WYK2 163 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 LPIN2Q92539 896 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 AIDAQ96BJ3 306 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 SCARF2Q96GP6 870 aaPredicted RBP7.27□□□□□ -1.25
NUP98-208ENST00000461047 NEUROD6Q96NK8 337 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 RUBCNLQ9H714 662 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 PODXL2Q9NZ53 605 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 SERTAD1Q9UHV2 236 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 PA2G4Q9UQ80 394 aaKnown RBP7.27□□□□□ -1.25
NUP98-208ENST00000461047 AFDNP55196 1824 aaKnown RBP7.27□□□□□ -1.25
NUP98-208ENST00000461047 ZNF804BA4D1E1 1349 aa7.27□□□□□ -1.25
NUP98-208ENST00000461047 EP400Q96L91 3159 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 PIK3CDO00329 1044 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 FRAT2O75474 233 aaPredicted RBP7.26□□□□□ -1.25
NUP98-208ENST00000461047 UFL1O94874 794 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 SMTNP53814 917 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 GPSM2P81274 684 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 FKBP4Q02790 459 aaKnown RBP eCLIP7.26□□□□□ -1.25
NUP98-208ENST00000461047 TFCP2Q12800 502 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 ATP2B3Q16720 1220 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 LRRC24Q50LG9 513 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 ZNF804AQ7Z570 1209 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms