RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 IDI1Q13907 227 aa6.82□□□□□ -1.32
ATPAF1-203ENST00000460928 KIAA0319Q5VV43 1072 aa6.82□□□□□ -1.32
ATPAF1-203ENST00000460928 ZAR1Q86SH2 424 aa6.82□□□□□ -1.32
ATPAF1-203ENST00000460928 NPAS4Q8IUM7 802 aa6.82□□□□□ -1.32
ATPAF1-203ENST00000460928 FBXL6Q8N531 539 aa6.82□□□□□ -1.32
ATPAF1-203ENST00000460928 ADGRE2Q9UHX3 823 aa6.82□□□□□ -1.32
ATPAF1-203ENST00000460928 MYO3AQ8NEV4 1616 aa6.82□□□□□ -1.32
ATPAF1-203ENST00000460928 MYO5BQ9ULV0 1848 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 B3GALT4O96024 378 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 MAOBP27338 520 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 MAPK1P28482 360 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 POU4F3Q15319 338 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 NFKBIBQ15653 356 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 SPRED3Q2MJR0 410 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 GATA6Q92908 595 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 KIAA1522Q9P206 1035 aaPredicted RBP6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 PRKAG2Q9UGJ0 569 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 BRPF3Q9ULD4 1205 aa6.81□□□□□ -1.32
ATPAF1-203ENST00000460928 SYNGAP1Q96PV0 1343 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 PIK3C2BO00750 1634 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 ALKQ9UM73 1620 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 CTSBP07858 339 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 ITPKAP23677 461 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 NOS1P29475 1434 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 PTPN12Q05209 780 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 ARHGAP31Q2M1Z3 1444 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 ZNF326Q5BKZ1 582 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 DDX54Q8TDD1 881 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 GIPC2Q8TF65 315 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 CITED4Q96RK1 184 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 SIN3AQ96ST3 1273 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 FAM129BQ96TA1 746 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 TRIM56Q9BRZ2 755 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 GSX1Q9H4S2 264 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 CCDC39Q9UFE4 941 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 ACTL7BQ9Y614 415 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 CPS1P31327 1500 aa6.8□□□□□ -1.32
ATPAF1-203ENST00000460928 CLTCL1P53675 1640 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 SPHKAPQ2M3C7 1700 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 CEP170BQ9Y4F5 1589 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 NDUFB5O43674 189 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 ADMP35318 185 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 ARHGAP4P98171 946 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 PDE3BQ13370 1112 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 MAP7Q14244 749 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 VSIG10LQ86VR7 867 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 ZSCAN29Q8IWY8 852 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 SHISA5Q8N114 240 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 TBC1D32Q96NH3 1257 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 ZNF576Q9H609 170 aa6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 ANGEL1Q9UNK9 670 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-203ENST00000460928 CPNE3O75131 537 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 LTKP29376 864 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 RGL3Q3MIN7 710 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 USPL1Q5W0Q7 1092 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 ABI1Q8IZP0 508 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 FBXL18Q96ME1 805 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 ASB16Q96NS5 453 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 CORO1BQ9BR76 489 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 SEMA6CQ9H3T2 930 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 ACSS3Q9H6R3 686 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 IGSF5Q9NSI5 407 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 RNF114Q9Y508 228 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 DHX57Q6P158 1386 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 A2ML1A8K2U0 1454 aa6.78□□□□□ -1.32
ATPAF1-203ENST00000460928 UBR1Q8IWV7 1749 aa6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 CYP26A1O43174 497 aa6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 IGSF3O75054 1194 aa6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 CYP27A1Q02318 531 aa6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 PRPF40BQ6NWY9 871 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 NFXL1Q6ZNB6 911 aa6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 DNAJC25Q9H1X3 360 aa6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 BSDC1Q9NW68 430 aaPredicted RBP6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 ANKRD30BQ9BXX2 1392 aa6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 ARID1BQ8NFD5 2236 aaPredicted RBP6.77□□□□□ -1.33
ATPAF1-203ENST00000460928 IGHA2P01877 340 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 NFICP08651 508 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 AP3B2Q13367 1082 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 RPS26P11Q5JNZ5 115 aaPredicted RBP6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 SEZ6L2Q6UXD5 910 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 CBLL1Q75N03 491 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 EHD4Q9H223 541 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 ABCB6Q9NP58 842 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 NPHS2Q9NP85 383 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 FAM105AQ9NUU6 356 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 RPRD2Q5VT52 1461 aaKnown RBP6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 TMEM131LA2VDJ0 1609 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 TRPM2O94759 1503 aa6.76□□□□□ -1.33
ATPAF1-203ENST00000460928 ZNF142P52746 1687 aaPredicted RBP6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 FAM170BA6NMN3 283 aa6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 ECEL1O95672 775 aa6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 TAGLNQ01995 201 aaKnown RBP6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 ORC1Q13415 861 aa6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 AKAP4Q5JQC9 854 aa6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 DUSP27Q5VZP5 1158 aa6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 DYMQ7RTS9 669 aa6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 FBXO33Q7Z6M2 555 aa6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 RAD18Q9NS91 495 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms