RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 DYNLL2Q96FJ2 89 aa24.69■■□□□ 1.54
RPUSD3-210ENST00000460909 SAGE1Q9NXZ1 904 aa24.69■■□□□ 1.54
RPUSD3-210ENST00000460909 ARPP21Q9UBL0 812 aaPredicted RBP24.69■■□□□ 1.54
RPUSD3-210ENST00000460909 TAOK2Q9UL54 1235 aa24.69■■□□□ 1.54
RPUSD3-210ENST00000460909 PTPRFP10586 1907 aa24.69■■□□□ 1.54
RPUSD3-210ENST00000460909 CCL15-CCL14A0A0B4J2E2 113 aa24.68■■□□□ 1.54
RPUSD3-210ENST00000460909 GDF11O95390 407 aa24.68■■□□□ 1.54
RPUSD3-210ENST00000460909 SNAPC2Q13487 334 aa24.68■■□□□ 1.54
RPUSD3-210ENST00000460909 CCL15Q16663 113 aa24.68■■□□□ 1.54
RPUSD3-210ENST00000460909 VPS53Q5VIR6 699 aa24.68■■□□□ 1.54
RPUSD3-210ENST00000460909 ZNF589Q86UQ0 364 aaPredicted RBP24.68■■□□□ 1.54
RPUSD3-210ENST00000460909 SLC44A5Q8NCS7 719 aa24.68■■□□□ 1.54
RPUSD3-210ENST00000460909 GINM1Q9NU53 330 aa24.68■■□□□ 1.54
RPUSD3-210ENST00000460909 PPP4R2Q9NY27 417 aa24.68■■□□□ 1.54
RPUSD3-210ENST00000460909 CXCL11O14625 94 aa24.67■■□□□ 1.54
RPUSD3-210ENST00000460909 TRPA1O75762 1119 aa24.67■■□□□ 1.54
RPUSD3-210ENST00000460909 APPP05067 770 aa24.67■■□□□ 1.54
RPUSD3-210ENST00000460909 ASNSP08243 561 aa24.67■■□□□ 1.54
RPUSD3-210ENST00000460909 HSPA8P11142 646 aaKnown RBP24.67■■□□□ 1.54
RPUSD3-210ENST00000460909 MOGSQ13724 837 aa24.67■■□□□ 1.54
RPUSD3-210ENST00000460909 AMOTL1Q8IY63 956 aa24.67■■□□□ 1.54
RPUSD3-210ENST00000460909 SWAP70Q9UH65 585 aa24.67■■□□□ 1.54
RPUSD3-210ENST00000460909 ZBTB21Q9ULJ3 1066 aa24.67■■□□□ 1.54
RPUSD3-210ENST00000460909 HIP1O00291 1037 aa24.66■■□□□ 1.54
RPUSD3-210ENST00000460909 CETPP11597 493 aa24.66■■□□□ 1.54
RPUSD3-210ENST00000460909 CTCFP49711 727 aaPredicted RBP24.66■■□□□ 1.54
RPUSD3-210ENST00000460909 CERKLQ49MI3 558 aaPredicted RBP24.66■■□□□ 1.54
RPUSD3-210ENST00000460909 C16orf86Q6ZW13 317 aa24.66■■□□□ 1.54
RPUSD3-210ENST00000460909 TSKSQ9UJT2 592 aa24.66■■□□□ 1.54
RPUSD3-210ENST00000460909 MYH8P13535 1937 aa24.66■■□□□ 1.54
RPUSD3-210ENST00000460909 ROBO3Q96MS0 1386 aa24.66■■□□□ 1.54
RPUSD3-210ENST00000460909 USP17L5A8MUK1 530 aa24.65■■□□□ 1.54
RPUSD3-210ENST00000460909 TDO2P48775 406 aa24.65■■□□□ 1.54
RPUSD3-210ENST00000460909 CDK8P49336 464 aa24.65■■□□□ 1.54
RPUSD3-210ENST00000460909 CWC27Q6UX04 472 aaKnown RBP24.65■■□□□ 1.54
RPUSD3-210ENST00000460909 NACAP1Q9BZK3 213 aa24.65■■□□□ 1.54
RPUSD3-210ENST00000460909 DIAPH3Q9NSV4 1193 aa24.65■■□□□ 1.54
RPUSD3-210ENST00000460909 CCDC171Q6TFL3 1326 aa24.64■■□□□ 1.54
RPUSD3-210ENST00000460909 GH2P01242 217 aa24.64■■□□□ 1.54
RPUSD3-210ENST00000460909 WDR18Q9BV38 432 aa24.64■■□□□ 1.54
RPUSD3-210ENST00000460909 CFHR5Q9BXR6 569 aa24.64■■□□□ 1.54
RPUSD3-210ENST00000460909 TBC1D2Q9BYX2 928 aa24.64■■□□□ 1.54
RPUSD3-210ENST00000460909 A0A0G2JLL6 359 aaPredicted RBP24.63■■□□□ 1.53
RPUSD3-210ENST00000460909 MINDY4BA8MYZ0 360 aa24.63■■□□□ 1.53
RPUSD3-210ENST00000460909 ALX1Q15699 326 aa24.63■■□□□ 1.53
RPUSD3-210ENST00000460909 ABCB5Q2M3G0 1257 aa24.63■■□□□ 1.53
RPUSD3-210ENST00000460909 PRRT2Q7Z6L0 340 aaPredicted RBP24.63■■□□□ 1.53
RPUSD3-210ENST00000460909 FAM43AQ8N2R8 423 aa24.63■■□□□ 1.53
RPUSD3-210ENST00000460909 ZNF280CQ8ND82 737 aa24.63■■□□□ 1.53
RPUSD3-210ENST00000460909 NAPBQ9H115 298 aa24.63■■□□□ 1.53
RPUSD3-210ENST00000460909 TRIM75PA6NK02 468 aa24.62■■□□□ 1.53
RPUSD3-210ENST00000460909 BTBD19C9JJ37 291 aa24.62■■□□□ 1.53
RPUSD3-210ENST00000460909 ALDH1A1P00352 501 aa24.62■■□□□ 1.53
RPUSD3-210ENST00000460909 HSPD1P10809 573 aaKnown RBP24.62■■□□□ 1.53
RPUSD3-210ENST00000460909 GUCY1A2P33402 732 aa24.62■■□□□ 1.53
RPUSD3-210ENST00000460909 LBX1P52954 281 aa24.62■■□□□ 1.53
RPUSD3-210ENST00000460909 SPP2Q13103 211 aa24.62■■□□□ 1.53
RPUSD3-210ENST00000460909 IL25Q9H293 177 aa24.62■■□□□ 1.53
RPUSD3-210ENST00000460909 CHMLP26374 656 aa24.61■■□□□ 1.53
RPUSD3-210ENST00000460909 GPAT2Q6NUI2 795 aa24.61■■□□□ 1.53
RPUSD3-210ENST00000460909 R3HDMLQ9H3Y0 253 aa24.61■■□□□ 1.53
RPUSD3-210ENST00000460909 TBC1D8O95759 1140 aa24.6■■□□□ 1.53
RPUSD3-210ENST00000460909 FGAP02671 866 aa24.6■■□□□ 1.53
RPUSD3-210ENST00000460909 MFAP1P55081 439 aaKnown RBP24.6■■□□□ 1.53
RPUSD3-210ENST00000460909 OTUD7BQ6GQQ9 843 aa24.6■■□□□ 1.53
RPUSD3-210ENST00000460909 AS3MTQ9HBK9 375 aa24.6■■□□□ 1.53
RPUSD3-210ENST00000460909 ZCCHC17Q9NP64 241 aaKnown RBP24.6■■□□□ 1.53
RPUSD3-210ENST00000460909 ZMYM6O95789 1325 aa24.6■■□□□ 1.53
RPUSD3-210ENST00000460909 AKR1B1P15121 316 aa24.59■■□□□ 1.53
RPUSD3-210ENST00000460909 PPARAQ07869 468 aa24.59■■□□□ 1.53
RPUSD3-210ENST00000460909 BMP2KLQ5H9B9 411 aa24.59■■□□□ 1.53
RPUSD3-210ENST00000460909 SH3D19Q5HYK7 790 aa24.59■■□□□ 1.53
RPUSD3-210ENST00000460909 ANKRD23Q86SG2 305 aa24.59■■□□□ 1.53
RPUSD3-210ENST00000460909 CCDC17Q96LX7 622 aa24.59■■□□□ 1.53
RPUSD3-210ENST00000460909 CABP5Q9NP86 173 aa24.59■■□□□ 1.53
RPUSD3-210ENST00000460909 LOC285556D6RIA3 1793 aa24.59■■□□□ 1.53
RPUSD3-210ENST00000460909 RASA1P20936 1047 aa24.58■■□□□ 1.53
RPUSD3-210ENST00000460909 SEPT2Q15019 361 aa24.58■■□□□ 1.53
RPUSD3-210ENST00000460909 FASTKD5Q7L8L6 764 aaKnown RBP24.58■■□□□ 1.53
RPUSD3-210ENST00000460909 PRDM10Q9NQV6 1147 aa24.58■■□□□ 1.53
RPUSD3-210ENST00000460909 ANAPC4Q9UJX5 808 aa24.58■■□□□ 1.53
RPUSD3-210ENST00000460909 GREB1LQ9C091 1923 aaPredicted RBP24.58■■□□□ 1.53
RPUSD3-210ENST00000460909 BACE1P56817 501 aa24.57■■□□□ 1.52
RPUSD3-210ENST00000460909 CRHR2Q13324 411 aa24.57■■□□□ 1.52
RPUSD3-210ENST00000460909 RAB3GAP1Q15042 981 aa24.57■■□□□ 1.52
RPUSD3-210ENST00000460909 STK11IPQ8N1F8 1099 aa24.57■■□□□ 1.52
RPUSD3-210ENST00000460909 USP17L10C9JJH3 530 aa24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 MPHOSPH10O00566 681 aaKnown RBP24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 HMGCS2P54868 508 aa24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 DGKZQ13574 1117 aa24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 MTMR2Q13614 643 aa24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 NOM1Q5C9Z4 860 aaKnown RBP24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 TMEM179Q6ZVK1 233 aa24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 PROCA1Q8NCQ7 364 aaPredicted RBP24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 CASP8AP2Q9UKL3 1982 aa24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 RAD50Q92878 1312 aa24.56■■□□□ 1.52
RPUSD3-210ENST00000460909 PDHXO00330 501 aa24.55■■□□□ 1.52
RPUSD3-210ENST00000460909 GADL1Q6ZQY3 521 aa24.55■■□□□ 1.52
RPUSD3-210ENST00000460909 SIAH1Q8IUQ4 282 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms