RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 AKAP2Q9Y2D5 859 aa5.61□□□□□ -1.51
RFC4-211ENST00000460408 ENC1O14682 589 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 ZNF865P0CJ78 1059 aaPredicted RBP5.6□□□□□ -1.51
RFC4-211ENST00000460408 PPP2R3AQ06190 1150 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 IKZF1Q13422 519 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 C9orf131Q5VYM1 1079 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 ERMP1Q7Z2K6 904 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 NT5DC4Q86YG4 428 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 SIAH1Q8IUQ4 282 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 SPACA3Q8IXA5 215 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 KCNB2Q92953 911 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 LIN37Q96GY3 246 aaPredicted RBP5.6□□□□□ -1.51
RFC4-211ENST00000460408 NECAB3Q96P71 396 aaPredicted RBP5.6□□□□□ -1.51
RFC4-211ENST00000460408 KRTAP4-5Q9BYR2 181 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 SSU72Q9NP77 194 aaKnown RBP5.6□□□□□ -1.51
RFC4-211ENST00000460408 TMEM39AQ9NV64 488 aa5.6□□□□□ -1.51
RFC4-211ENST00000460408 FBXO24O75426 580 aa5.59□□□□□ -1.51
RFC4-211ENST00000460408 AFMP43652 599 aa5.59□□□□□ -1.51
RFC4-211ENST00000460408 NKPD1Q17RQ9 610 aa5.59□□□□□ -1.51
RFC4-211ENST00000460408 TPTE2Q6XPS3 522 aa5.59□□□□□ -1.51
RFC4-211ENST00000460408 LCNL1Q6ZST4 164 aa5.59□□□□□ -1.51
RFC4-211ENST00000460408 SV2BQ7L1I2 683 aa5.59□□□□□ -1.51
RFC4-211ENST00000460408 ZSCAN18Q8TBC5 510 aaPredicted RBP5.59□□□□□ -1.51
RFC4-211ENST00000460408 LMCD1Q9NZU5 365 aa5.59□□□□□ -1.51
RFC4-211ENST00000460408 PITPNM2Q9BZ72 1349 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 PAGE1O75459 146 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 GLI1P08151 1106 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 CELA3AP09093 270 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 CCDC85BQ15834 202 aaPredicted RBP5.58□□□□□ -1.52
RFC4-211ENST00000460408 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 FYB2Q5VWT5 728 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 HS2ST1Q7LGA3 356 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 SULF2Q8IWU5 870 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 LRRC56Q8IYG6 542 aaPredicted RBP5.58□□□□□ -1.52
RFC4-211ENST00000460408 STK35Q8TDR2 534 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 CEP44Q9C0F1 390 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 PRDM10Q9NQV6 1147 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 CACNA2D2Q9NY47 1150 aa5.58□□□□□ -1.52
RFC4-211ENST00000460408 GPN3Q9UHW5 284 aaPredicted RBP5.58□□□□□ -1.52
RFC4-211ENST00000460408 DDX41Q9UJV9 622 aaKnown RBP5.58□□□□□ -1.52
RFC4-211ENST00000460408 ARNTP27540 789 aa5.57□□□□□ -1.52
RFC4-211ENST00000460408 ERCC5P28715 1186 aaPredicted RBP5.57□□□□□ -1.52
RFC4-211ENST00000460408 CLCN7P51798 805 aa5.57□□□□□ -1.52
RFC4-211ENST00000460408 RACK1P63244 317 aaKnown RBP5.57□□□□□ -1.52
RFC4-211ENST00000460408 ZNF394Q53GI3 561 aa5.57□□□□□ -1.52
RFC4-211ENST00000460408 LILRA6Q6PI73 481 aa5.57□□□□□ -1.52
RFC4-211ENST00000460408 SYDE1Q6ZW31 735 aaPredicted RBP5.57□□□□□ -1.52
RFC4-211ENST00000460408 ANKLE2Q86XL3 938 aa5.57□□□□□ -1.52
RFC4-211ENST00000460408 RSRP1Q9BUV0 290 aa5.57□□□□□ -1.52
RFC4-211ENST00000460408 COPRSQ9NQ92 184 aa5.57□□□□□ -1.52
RFC4-211ENST00000460408 GGT7Q9UJ14 662 aa5.57□□□□□ -1.52
RFC4-211ENST00000460408 KRT1P04264 644 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 NTF4P34130 210 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 ZNF252P-AS1Q0IIN9 211 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 PRR23BQ6ZRT6 265 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 GPBAR1Q8TDU6 330 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 RHOVQ96L33 236 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 EMILIN2Q9BXX0 1053 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 TGIF2Q9GZN2 237 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 KBTBD4Q9NVX7 518 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 PCDHGB7Q9Y5F8 929 aa5.56□□□□□ -1.52
RFC4-211ENST00000460408 ZSCAN22P10073 491 aaPredicted RBP5.55□□□□□ -1.52
RFC4-211ENST00000460408 NME2P22392 152 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 LIG3P49916 1009 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 RING1Q06587 406 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 RASIP1Q5U651 963 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 MAP1SQ66K74 1059 aaPredicted RBP5.55□□□□□ -1.52
RFC4-211ENST00000460408 CYFIP1Q7L576 1253 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 USP48Q86UV5 1035 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 PHC3Q8NDX5 983 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 KIRREL1Q96J84 757 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 C8orf37Q96NL8 207 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 RAPGEFL1Q9UHV5 662 aa5.55□□□□□ -1.52
RFC4-211ENST00000460408 NCANO14594 1321 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 GNAT3A8MTJ3 354 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 EOMESO95936 686 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 C1QTNF9P0C862 333 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 RLBP1P12271 317 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 BMP6P22004 513 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 GDNFP39905 211 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 ZC3H6P61129 1189 aaKnown RBP5.54□□□□□ -1.52
RFC4-211ENST00000460408 RPS26P62854 115 aaKnown RBP5.54□□□□□ -1.52
RFC4-211ENST00000460408 TMEM67Q5HYA8 995 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 PPM1JQ5JR12 505 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 PCNX4Q63HM2 1172 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 MPZL3Q6UWV2 235 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 AGMOQ6ZNB7 445 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 UBE3DQ7Z6J8 389 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 TMEM74Q96NL1 305 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 TINF2Q9BSI4 451 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 KCNQ5Q9NR82 932 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 C19orf73Q9NVV2 129 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 MAPK8IP1Q9UQF2 711 aa5.54□□□□□ -1.52
RFC4-211ENST00000460408 F6X3S4 739 aa5.53□□□□□ -1.52
RFC4-211ENST00000460408 PRRG2O14669 202 aa5.53□□□□□ -1.52
RFC4-211ENST00000460408 GARTP22102 1010 aa5.53□□□□□ -1.52
RFC4-211ENST00000460408 TTBK2Q6IQ55 1244 aa5.53□□□□□ -1.52
RFC4-211ENST00000460408 TTLL10Q6ZVT0 673 aa5.53□□□□□ -1.52
RFC4-211ENST00000460408 AMIGO3Q86WK7 504 aa5.53□□□□□ -1.52
RFC4-211ENST00000460408 FBXO15Q8NCQ5 510 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms