RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 IGSF3O75054 1194 aa16.57■□□□□ 0.24
PTPRU-205ENST00000460170 PHKA1P46020 1223 aa16.57■□□□□ 0.24
PTPRU-205ENST00000460170 NDUFA8P51970 172 aa16.57■□□□□ 0.24
PTPRU-205ENST00000460170 MRVI1Q9Y6F6 885 aa16.57■□□□□ 0.24
PTPRU-205ENST00000460170 CMTR1Q8N1G2 835 aaKnown RBP16.57■□□□□ 0.24
PTPRU-205ENST00000460170 VPS18Q9P253 973 aa16.57■□□□□ 0.24
PTPRU-205ENST00000460170 ARPP21Q9UBL0 812 aaPredicted RBP16.57■□□□□ 0.24
PTPRU-205ENST00000460170 LRWD1Q9UFC0 647 aa16.57■□□□□ 0.24
PTPRU-205ENST00000460170 LMTK3Q96Q04 1460 aa16.57■□□□□ 0.24
PTPRU-205ENST00000460170 TMEM94Q12767 1356 aa16.57■□□□□ 0.24
PTPRU-205ENST00000460170 BTBD18B2RXH4 712 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 PHACTR2O75167 634 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 EIF6P56537 245 aaKnown RBP16.56■□□□□ 0.24
PTPRU-205ENST00000460170 CHMP4BP1P59074 171 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 DHX37Q8IY37 1157 aaKnown RBP16.56■□□□□ 0.24
PTPRU-205ENST00000460170 CCDC24Q8N4L8 307 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 PARP3Q9Y6F1 533 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 CCDC91Q7Z6B0 441 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 ZSCAN10Q96SZ4 725 aaPredicted RBP16.56■□□□□ 0.24
PTPRU-205ENST00000460170 NUP58Q9BVL2 599 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 TNKSO95271 1327 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 BBXQ8WY36 941 aaPredicted RBP16.56■□□□□ 0.24
PTPRU-205ENST00000460170 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 LARGE1O95461 756 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 MED23Q9ULK4 1368 aa16.56■□□□□ 0.24
PTPRU-205ENST00000460170 GYG1P46976 350 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 MAPKAPK5Q8IW41 473 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 CCDC155Q8N6L0 562 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 SDR42E1Q8WUS8 393 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 GLT8D2Q9H1C3 349 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 CDC42BPBQ9Y5S2 1711 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 TDRD7Q8NHU6 1098 aaKnown RBP16.55■□□□□ 0.24
PTPRU-205ENST00000460170 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 VEZTQ9HBM0 779 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 NELFBQ8WX92 580 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 ASAP1Q9ULH1 1129 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 WDHD1O75717 1129 aaPredicted RBP16.55■□□□□ 0.24
PTPRU-205ENST00000460170 KRBA2Q6ZNG9 492 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 RASAL2Q9UJF2 1139 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 MED14O60244 1454 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 ANKARQ7Z5J8 1434 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 BLZF1Q9H2G9 400 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 BCL2L12Q9HB09 334 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 RSPH14Q9UHP6 348 aa16.55■□□□□ 0.24
PTPRU-205ENST00000460170 DCAF17Q5H9S7 520 aaPredicted RBP16.54■□□□□ 0.24
PTPRU-205ENST00000460170 LRRC8AQ8IWT6 810 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 TGFBRAP1Q8WUH2 860 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 ABCA6Q8N139 1617 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 RAPGEF1Q13905 1077 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 ADCY7P51828 1080 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 SNX29Q8TEQ0 813 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 PLCD4Q9BRC7 762 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 CARMIL3Q8ND23 1372 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 HAUS3Q68CZ6 603 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 RCOR1Q9UKL0 485 aa16.54■□□□□ 0.24
PTPRU-205ENST00000460170 ADGRB3O60242 1522 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 TNNC1P63316 161 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 SLC39A14Q15043 492 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 FAM98CQ17RN3 349 aaKnown RBP16.53■□□□□ 0.24
PTPRU-205ENST00000460170 CABP7Q86V35 215 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 TRIML1Q8N9V2 468 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 CLIC6Q96NY7 704 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 ALKQ9UM73 1620 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 NEBLO76041 1014 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 TTLL12Q14166 644 aaPredicted RBP16.53■□□□□ 0.24
PTPRU-205ENST00000460170 APOA5Q6Q788 366 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 IFT81Q8WYA0 676 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 JAKMIP2Q96AA8 810 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
PTPRU-205ENST00000460170 ZBTB9Q96C00 473 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 ZFP91Q96JP5 570 aaPredicted RBP16.53■□□□□ 0.24
PTPRU-205ENST00000460170 SETBP1Q9Y6X0 1596 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 M0R2C6 588 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
PTPRU-205ENST00000460170 ADKP55263 362 aaKnown RBP16.53■□□□□ 0.24
PTPRU-205ENST00000460170 CHRNDQ07001 517 aa16.53■□□□□ 0.24
PTPRU-205ENST00000460170 SMAP1Q8IYB5 467 aaPredicted RBP16.53■□□□□ 0.24
PTPRU-205ENST00000460170 CETN3O15182 167 aa16.52■□□□□ 0.24
PTPRU-205ENST00000460170 VWA3BQ502W6 1294 aa16.52■□□□□ 0.24
PTPRU-205ENST00000460170 POLR3EQ9NVU0 708 aa16.52■□□□□ 0.24
PTPRU-205ENST00000460170 REXO1Q8N1G1 1221 aaKnown RBP16.52■□□□□ 0.24
PTPRU-205ENST00000460170 TSC1Q92574 1164 aa16.52■□□□□ 0.24
PTPRU-205ENST00000460170 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.24
PTPRU-205ENST00000460170 FMNL3Q8IVF7 1028 aa16.52■□□□□ 0.23
PTPRU-205ENST00000460170 FANCLQ9NW38 375 aa16.52■□□□□ 0.23
PTPRU-205ENST00000460170 E9PCH4 1651 aa16.52■□□□□ 0.23
PTPRU-205ENST00000460170 NBPF11Q86T75 865 aa16.52■□□□□ 0.23
PTPRU-205ENST00000460170 ATRIPQ8WXE1 791 aa16.52■□□□□ 0.23
PTPRU-205ENST00000460170 OSBP2Q969R2 916 aa16.52■□□□□ 0.23
PTPRU-205ENST00000460170 WDR17Q8IZU2 1322 aa16.52■□□□□ 0.23
PTPRU-205ENST00000460170 EPB41P11171 864 aaKnown RBP16.51■□□□□ 0.23
PTPRU-205ENST00000460170 TBC1D22AQ8WUA7 517 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 SLF1Q9BQI6 1058 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 PYCARDQ9ULZ3 195 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
PTPRU-205ENST00000460170 CALCRLQ16602 461 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 BLIDQ8IZY5 108 aa16.51■□□□□ 0.23
PTPRU-205ENST00000460170 CCDC51Q96ER9 411 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms