RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SSH1Q8WYL5 1049 aa9.74□□□□□ -0.85
HPS4-207ENST00000459918 LRP2BPQ9P2M1 347 aa9.74□□□□□ -0.85
HPS4-207ENST00000459918 HERC5Q9UII4 1024 aaKnown RBP9.74□□□□□ -0.85
HPS4-207ENST00000459918 AKAP2Q9Y2D5 859 aa9.74□□□□□ -0.85
HPS4-207ENST00000459918 DNAH12Q6ZR08 3092 aa9.74□□□□□ -0.85
HPS4-207ENST00000459918 PFASO15067 1338 aa9.74□□□□□ -0.85
HPS4-207ENST00000459918 LAMA2P24043 3122 aaKnown RBP9.73□□□□□ -0.85
HPS4-207ENST00000459918 CDK5RAP2Q96SN8 1893 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 GPR75-ASB3A0A0A6YYF3 556 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 GLRX3O76003 335 aaKnown RBP9.73□□□□□ -0.85
HPS4-207ENST00000459918 ASNSP08243 561 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 CCND3P30281 292 aaPredicted RBP9.73□□□□□ -0.85
HPS4-207ENST00000459918 HERVK_113P62684 666 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 MAP3K10Q02779 954 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 CACNB2Q08289 660 aaPredicted RBP9.73□□□□□ -0.85
HPS4-207ENST00000459918 LRRC26Q2I0M4 334 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 XAGE2Q96GT9 111 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 FEZ1Q99689 392 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 APBA2Q99767 749 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 SENP6Q9GZR1 1112 aaPredicted RBP9.73□□□□□ -0.85
HPS4-207ENST00000459918 MORF4L1Q9UBU8 362 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 GJD2Q9UKL4 321 aa9.73□□□□□ -0.85
HPS4-207ENST00000459918 FARP1Q9Y4F1 1045 aaPredicted RBP9.73□□□□□ -0.85
HPS4-207ENST00000459918 PDS5AQ29RF7 1337 aaKnown RBP9.73□□□□□ -0.85
HPS4-207ENST00000459918 FOCADQ5VW36 1801 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 COL2A1P02458 1487 aaPredicted RBP9.72□□□□□ -0.85
HPS4-207ENST00000459918 PEX10O60683 326 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 GDF11O95390 407 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 BAG3O95817 575 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 XRCC5P13010 732 aaKnown RBP9.72□□□□□ -0.85
HPS4-207ENST00000459918 ATN1P54259 1190 aaPredicted RBP9.72□□□□□ -0.85
HPS4-207ENST00000459918 BACE1P56817 501 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 RHBDL3P58872 404 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 ZYXQ15942 572 aaKnown RBP9.72□□□□□ -0.85
HPS4-207ENST00000459918 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 GPR142Q7Z601 462 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 PLEKHH3Q7Z736 793 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 SPATA5Q8NB90 893 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 FAM163AQ96GL9 167 aaPredicted RBP9.72□□□□□ -0.85
HPS4-207ENST00000459918 P2RX7Q99572 595 aaKnown RBP9.72□□□□□ -0.85
HPS4-207ENST00000459918 PRDM5Q9NQX1 630 aaPredicted RBP9.72□□□□□ -0.85
HPS4-207ENST00000459918 AATFQ9NY61 560 aaKnown RBP eCLIP9.72□□□□□ -0.85
HPS4-207ENST00000459918 PI4KBQ9UBF8 816 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 IVNS1ABPQ9Y6Y0 642 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 EYSQ5T1H1 3165 aa9.72□□□□□ -0.85
HPS4-207ENST00000459918 SIPA1L1O43166 1804 aa9.71□□□□□ -0.85
HPS4-207ENST00000459918 LTBP2Q14767 1821 aa9.71□□□□□ -0.85
HPS4-207ENST00000459918 C19orf81C9J6K1 198 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 USP17L10C9JJH3 530 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 E9PSI1 815 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 SRGAP3O43295 1099 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 MAP4K4O95819 1239 aaPredicted RBP9.71□□□□□ -0.86
HPS4-207ENST00000459918 HLA-DOAP06340 250 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 ERVK-9P63128 1117 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 ERVK-24P63145 666 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 CCNA1P78396 465 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 TFCP2Q12800 502 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 CCL14Q16627 93 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 SH3D19Q5HYK7 790 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 MAP3K21Q5TCX8 1036 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 MFSD14CQ5VZR4 134 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 PI16Q6UXB8 463 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 ATF7IPQ6VMQ6 1270 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 SH3RF3Q8TEJ3 882 aaPredicted RBP9.71□□□□□ -0.86
HPS4-207ENST00000459918 GTF3C2Q8WUA4 911 aaPredicted RBP9.71□□□□□ -0.86
HPS4-207ENST00000459918 DHX36Q9H2U1 1008 aaKnown RBP9.71□□□□□ -0.86
HPS4-207ENST00000459918 ATP11BQ9Y2G3 1177 aa9.71□□□□□ -0.86
HPS4-207ENST00000459918 MYH1P12882 1939 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 COL6A1P12109 1028 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 PLCG2P16885 1265 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 ATP2B2Q01814 1243 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 NAA16Q6N069 864 aaPredicted RBP9.7□□□□□ -0.86
HPS4-207ENST00000459918 MAPKAPK5Q8IW41 473 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 NSUN4Q96CB9 384 aaKnown RBP9.7□□□□□ -0.86
HPS4-207ENST00000459918 GUCD1Q96NT3 240 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 WDR18Q9BV38 432 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 API5Q9BZZ5 524 aaKnown RBP9.7□□□□□ -0.86
HPS4-207ENST00000459918 PORCNQ9H237 461 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 TXNRD2Q9NNW7 524 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 COPRSQ9NQ92 184 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 HMG20BQ9P0W2 317 aa9.7□□□□□ -0.86
HPS4-207ENST00000459918 SAP30BPQ9UHR5 308 aaKnown RBP9.7□□□□□ -0.86
HPS4-207ENST00000459918 MSCO60682 206 aa9.69□□□□□ -0.86
HPS4-207ENST00000459918 FLT1P17948 1338 aa9.69□□□□□ -0.86
HPS4-207ENST00000459918 HOXA7P31268 230 aaPredicted RBP9.69□□□□□ -0.86
HPS4-207ENST00000459918 MAP2K5Q13163 448 aa9.69□□□□□ -0.86
HPS4-207ENST00000459918 RRP1BQ14684 758 aaKnown RBP9.69□□□□□ -0.86
HPS4-207ENST00000459918 ALDH1L2Q3SY69 923 aa9.69□□□□□ -0.86
HPS4-207ENST00000459918 TTC39AQ5SRH9 613 aa9.69□□□□□ -0.86
HPS4-207ENST00000459918 USP17L2Q6R6M4 530 aa9.69□□□□□ -0.86
HPS4-207ENST00000459918 MAFAQ8NHW3 353 aaPredicted RBP9.69□□□□□ -0.86
HPS4-207ENST00000459918 TGFBRAP1Q8WUH2 860 aa9.69□□□□□ -0.86
HPS4-207ENST00000459918 EDC3Q96F86 508 aaKnown RBP9.69□□□□□ -0.86
HPS4-207ENST00000459918 RBPJLQ9UBG7 517 aa9.69□□□□□ -0.86
HPS4-207ENST00000459918 DDX20Q9UHI6 824 aaKnown RBP9.69□□□□□ -0.86
HPS4-207ENST00000459918 ZBTB21Q9ULJ3 1066 aa9.69□□□□□ -0.86
HPS4-207ENST00000459918 VCANP13611 3396 aa9.68□□□□□ -0.86
HPS4-207ENST00000459918 KBTBD13C9JR72 458 aa9.68□□□□□ -0.86
HPS4-207ENST00000459918 UQCRFS1P1P0C7P4 283 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms