RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 CPSF2Q9P2I0 782 aaKnown RBP12.9□□□□□ -0.34
DDX39B-214ENST00000458640 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
DDX39B-214ENST00000458640 DDX60Q8IY21 1712 aaKnown RBP12.9□□□□□ -0.34
DDX39B-214ENST00000458640 LRP5O75197 1615 aa12.9□□□□□ -0.34
DDX39B-214ENST00000458640 SHTN1A0MZ66 631 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 GNPATO15228 680 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 ATP5JP18859 108 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 PTF1AQ7RTS3 328 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 TLR7Q9NYK1 1049 aaKnown RBP12.89□□□□□ -0.35
DDX39B-214ENST00000458640 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
DDX39B-214ENST00000458640 PALD1Q9ULE6 856 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-214ENST00000458640 ITGA6P23229 1130 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 SUSD4Q5VX71 490 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 BRAPQ7Z569 592 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 KLHL23Q8NBE8 558 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 FAM204AQ9H8W3 233 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 RFX7Q2KHR2 1363 aa12.89□□□□□ -0.35
DDX39B-214ENST00000458640 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 ZPR1O75312 459 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 PAX7P23759 505 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 MCM3P25205 808 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 SRGAP1Q7Z6B7 1085 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 ANKRD23Q86SG2 305 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 MAB21L3Q8N8X9 362 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 ZNF594Q96JF6 807 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-214ENST00000458640 GREM2Q9H772 168 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 ANO2Q9NQ90 1003 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 NARFQ9UHQ1 456 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-214ENST00000458640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-214ENST00000458640 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 SNUPNO95149 360 aaKnown RBP12.88□□□□□ -0.35
DDX39B-214ENST00000458640 NTSR2O95665 410 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 SETSIPP0DME0 302 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 MYBL2P10244 700 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 GJB2P29033 226 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 FNTAP49354 379 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 MCM6Q14566 821 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 SLC5A9Q2M3M2 681 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 LRRC24Q50LG9 513 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 FBXW10Q5XX13 1052 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 TTC19Q6DKK2 380 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-214ENST00000458640 MICALCLQ6ZW33 695 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 SPATA32Q96LK8 384 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 MYO6Q9UM54 1294 aa12.88□□□□□ -0.35
DDX39B-214ENST00000458640 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 EZRP15311 586 aaKnown RBP12.87□□□□□ -0.35
DDX39B-214ENST00000458640 SMTNP53814 917 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 KCNQ4P56696 695 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 DRP2Q13474 957 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 SETDB1Q15047 1291 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 CCDC152Q4G0S7 254 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 ARMCX5Q6P1M9 558 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 LDHAL6AQ6ZMR3 332 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 NEUROD6Q96NK8 337 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
DDX39B-214ENST00000458640 DBNDD2Q9BQY9 259 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 CNNM1Q9NRU3 951 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 GGA2Q9UJY4 613 aa12.87□□□□□ -0.35
DDX39B-214ENST00000458640 MAFGO15525 162 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 MYO1BO43795 1136 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 PECAM1P16284 738 aaPredicted RBP12.86□□□□□ -0.35
DDX39B-214ENST00000458640 ADRA2BP18089 450 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 CASP8Q14790 479 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 FILIP1LQ4L180 1135 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 DHX40Q8IX18 779 aaKnown RBP12.86□□□□□ -0.35
DDX39B-214ENST00000458640 SYNE4Q8N205 404 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 CCDC102AQ96A19 550 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 FSD1Q9BTV5 496 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 BOLA2Q9H3K6 86 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 ABCC12Q96J65 1359 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 ARHGAP6O43182 974 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 KIAA0754O94854 1291 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 METTL24Q5JXM2 366 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 NOL8Q76FK4 1167 aaKnown RBP12.86□□□□□ -0.35
DDX39B-214ENST00000458640 ATP6V0A4Q9HBG4 840 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
DDX39B-214ENST00000458640 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
DDX39B-214ENST00000458640 SLC8A1P32418 973 aa12.85□□□□□ -0.35
DDX39B-214ENST00000458640 RPS6KA3P51812 740 aa12.85□□□□□ -0.35
DDX39B-214ENST00000458640 AK2P54819 239 aa12.85□□□□□ -0.35
DDX39B-214ENST00000458640 CHMP4BP1P59074 171 aa12.85□□□□□ -0.35
DDX39B-214ENST00000458640 SLMAPQ14BN4 828 aa12.85□□□□□ -0.35
DDX39B-214ENST00000458640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDX39B-214ENST00000458640 LEO1Q8WVC0 666 aaPredicted RBP12.85□□□□□ -0.35
DDX39B-214ENST00000458640 PUS3Q9BZE2 481 aaKnown RBP12.85□□□□□ -0.35
DDX39B-214ENST00000458640 UPF3BQ9BZI7 483 aaKnown RBP12.85□□□□□ -0.35
DDX39B-214ENST00000458640 TM6SF1Q9BZW5 370 aa12.85□□□□□ -0.35
DDX39B-214ENST00000458640 MROH5Q6ZUA9 1318 aa12.85□□□□□ -0.35
DDX39B-214ENST00000458640 CBFA2T2O43439 604 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 PRPF6O94906 941 aaKnown RBP12.84□□□□□ -0.35
DDX39B-214ENST00000458640 WDR93Q6P2C0 686 aa12.84□□□□□ -0.35
DDX39B-214ENST00000458640 DRAXINQ8NBI3 349 aaPredicted RBP12.84□□□□□ -0.35
DDX39B-214ENST00000458640 SETDB2Q96T68 719 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms