RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 IARSP41252 1262 aaKnown RBP11.69□□□□□ -0.54
CLIP4-208ENST00000456385 AFMP43652 599 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 LIG3P49916 1009 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 TUBB4BP68371 445 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 TBC1D10CQ8IV04 446 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 NOSTRINQ8IVI9 506 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
CLIP4-208ENST00000456385 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
CLIP4-208ENST00000456385 TFR2Q9UP52 801 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 PCDHB6Q9Y5E3 794 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 CDHR2Q9BYE9 1310 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 A0A087WUV0 522 aaPredicted RBP11.69□□□□□ -0.54
CLIP4-208ENST00000456385 GPAA1O43292 621 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 PTPREP23469 700 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 ERCC5P28715 1186 aaPredicted RBP11.69□□□□□ -0.54
CLIP4-208ENST00000456385 IL15P40933 162 aaPredicted RBP11.69□□□□□ -0.54
CLIP4-208ENST00000456385 CCT5P48643 541 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 MMS22LQ6ZRQ5 1243 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 ELOA2Q8IYF1 753 aaPredicted RBP11.69□□□□□ -0.54
CLIP4-208ENST00000456385 CCDC148Q8NFR7 591 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 SLC26A6Q9BXS9 759 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 WWC3Q9ULE0 1092 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 GUCA1BQ9UMX6 200 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 SH2B2O14492 632 aaPredicted RBP11.68□□□□□ -0.54
CLIP4-208ENST00000456385 CDKL5O76039 1030 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 MYBL2P10244 700 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 SPATA1Q5VX52 437 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 SPATA20Q8TB22 786 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 SMARCC1Q92922 1105 aaPredicted RBP11.68□□□□□ -0.54
CLIP4-208ENST00000456385 MMS19Q96T76 1030 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 KAT14Q9H8E8 782 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 EID1Q9Y6B2 187 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 SYNRGQ9UMZ2 1314 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 A0A087X0B3 334 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 B4E1Z4 1266 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 AGPSO00116 658 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 KCNA6P17658 529 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 ZAP70P43403 619 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 USP14P54578 494 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 NR5A1Q13285 461 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 FBXW10Q5XX13 1052 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 CNGA4Q8IV77 575 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 SUGP1Q8IWZ8 645 aaKnown RBP11.68□□□□□ -0.54
CLIP4-208ENST00000456385 CCDC82Q8N4S0 544 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 TRIML1Q8N9V2 468 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 CHP1Q99653 195 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 CSRNP2Q9H175 543 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 VIPAS39Q9H9C1 493 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 GPR108Q9NPR9 543 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 ABHD10Q9NUJ1 306 aa11.68□□□□□ -0.54
CLIP4-208ENST00000456385 NFAT5O94916 1531 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 C5P01031 1676 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 EYA2O00167 538 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 ZBTB43O43298 467 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 ERLIN2O94905 339 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 CEBPAP49715 358 aaPredicted RBP11.67□□□□□ -0.54
CLIP4-208ENST00000456385 STIM1Q13586 685 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 CUL4BQ13620 913 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 CDKAL1Q5VV42 579 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 MCTP2Q6DN12 878 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
CLIP4-208ENST00000456385 NFXL1Q6ZNB6 911 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 DIS3L2Q8IYB7 885 aaKnown RBP11.67□□□□□ -0.54
CLIP4-208ENST00000456385 COG1Q8WTW3 980 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 CAPZA3Q96KX2 299 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 SLC52A2Q9HAB3 445 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 AXIN2Q9Y2T1 843 aa11.67□□□□□ -0.54
CLIP4-208ENST00000456385 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 TUBBP07437 444 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 DPYDQ12882 1025 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 CMTR1Q8N1G2 835 aaKnown RBP11.66□□□□□ -0.54
CLIP4-208ENST00000456385 CTCFLQ8NI51 663 aaPredicted RBP11.66□□□□□ -0.54
CLIP4-208ENST00000456385 APPBP2Q92624 585 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 EPSTI1Q96J88 318 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 NUP88Q99567 741 aaPredicted RBP11.66□□□□□ -0.54
CLIP4-208ENST00000456385 REXO2Q9Y3B8 237 aaKnown RBP11.66□□□□□ -0.54
CLIP4-208ENST00000456385 TBX22Q9Y458 520 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 ATP1A1P05023 1023 aaKnown RBP11.66□□□□□ -0.54
CLIP4-208ENST00000456385 FECHP22830 423 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 IRAK1P51617 712 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 EIF5P55010 431 aaKnown RBP11.66□□□□□ -0.54
CLIP4-208ENST00000456385 FILIP1LQ4L180 1135 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 TTC19Q6DKK2 380 aaPredicted RBP11.66□□□□□ -0.54
CLIP4-208ENST00000456385 TRAPPC11Q7Z392 1133 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 TEX2Q8IWB9 1127 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 IGDCC4Q8TDY8 1250 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 STAMQ92783 540 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 XAGE2Q96GT9 111 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 VPS16Q9H269 839 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 FAM169AQ9Y6X4 670 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 OVOS2A0A0G2JMS6 1433 aa11.66□□□□□ -0.54
CLIP4-208ENST00000456385 PPP1R3GB7ZBB8 358 aa11.65□□□□□ -0.54
CLIP4-208ENST00000456385 H7C1W4 665 aa11.65□□□□□ -0.54
CLIP4-208ENST00000456385 SHOX2O60902 331 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-208ENST00000456385 MMP1P03956 469 aa11.65□□□□□ -0.54
CLIP4-208ENST00000456385 APPP05067 770 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms