RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 BTBD19C9JJ37 291 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 USP17L12C9JPN9 530 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 USP17L21D6R901 530 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 M0R2C6 588 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 PDHXO00330 501 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 FKTNO75072 461 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 GH2P01242 217 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 RAB3GAP1Q15042 981 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 ABCB5Q2M3G0 1257 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 GIMAP6Q6P9H5 292 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 PRRT2Q7Z6L0 340 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-212ENST00000456075 ANKRD23Q86SG2 305 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 ZNF296Q8WUU4 475 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-212ENST00000456075 FEZ1Q99689 392 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 OSBPL3Q9H4L5 887 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-212ENST00000456075 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
TOP3B-212ENST00000456075 MINDY4BA8MYZ0 360 aa12.38□□□□□ -0.43
TOP3B-212ENST00000456075 CYP2D6P10635 497 aa12.38□□□□□ -0.43
TOP3B-212ENST00000456075 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.43
TOP3B-212ENST00000456075 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
TOP3B-212ENST00000456075 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
TOP3B-212ENST00000456075 ZMYM1Q5SVZ6 1142 aa12.38□□□□□ -0.43
TOP3B-212ENST00000456075 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
TOP3B-212ENST00000456075 TATDN1Q6P1N9 297 aa12.38□□□□□ -0.43
TOP3B-212ENST00000456075 TICAM2Q86XR7 235 aa12.38□□□□□ -0.43
TOP3B-212ENST00000456075 PARK7Q99497 189 aaKnown RBP12.38□□□□□ -0.43
TOP3B-212ENST00000456075 NAPBQ9H115 298 aa12.38□□□□□ -0.43
TOP3B-212ENST00000456075 DIAPH3Q9NSV4 1193 aa12.38□□□□□ -0.43
TOP3B-212ENST00000456075 TMOD4Q9NZQ9 345 aa12.38□□□□□ -0.43
TOP3B-212ENST00000456075 PATL2C9JE40 543 aaKnown RBP12.37□□□□□ -0.43
TOP3B-212ENST00000456075 HIP1O00291 1037 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 SLC3A2P08195 630 aaKnown RBP12.37□□□□□ -0.43
TOP3B-212ENST00000456075 SHMT1P34896 483 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 HMGCS2P54868 508 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 MFAP1P55081 439 aaKnown RBP12.37□□□□□ -0.43
TOP3B-212ENST00000456075 DGKZQ13574 1117 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 MTMR2Q13614 643 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 ARHGEF6Q15052 776 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 CTR9Q6PD62 1173 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 PROCA1Q8NCQ7 364 aaPredicted RBP12.37□□□□□ -0.43
TOP3B-212ENST00000456075 SMCR8Q8TEV9 937 aaPredicted RBP12.37□□□□□ -0.43
TOP3B-212ENST00000456075 DYNLL2Q96FJ2 89 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 ERO1AQ96HE7 468 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 SEC62Q99442 399 aaKnown RBP12.37□□□□□ -0.43
TOP3B-212ENST00000456075 WDR18Q9BV38 432 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 ZNF287Q9HBT7 754 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 SIPA1L1O43166 1804 aa12.37□□□□□ -0.43
TOP3B-212ENST00000456075 LAMB1P07942 1786 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 CYP2D7A0A087X1C5 515 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 GSG1L2A8MUP6 293 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 USP17L10C9JJH3 530 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 BACE1P56817 501 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 SP3Q02447 781 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 GABPAQ06546 454 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 KIF22Q14807 665 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 MCMDC2Q4G0Z9 681 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 CENPQQ7L2Z9 268 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-212ENST00000456075 CTU1Q7Z7A3 348 aaKnown RBP12.36□□□□□ -0.43
TOP3B-212ENST00000456075 SLC44A5Q8NCS7 719 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 R3HDMLQ9H3Y0 253 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 AGTPBP1Q9UPW5 1226 aa12.36□□□□□ -0.43
TOP3B-212ENST00000456075 DDX60LQ5H9U9 1706 aaKnown RBP12.36□□□□□ -0.43
TOP3B-212ENST00000456075 C19orf81C9J6K1 198 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 TLR2O60603 784 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 OSBPP22059 807 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 CDK8P49336 464 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 JAG1P78504 1218 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-212ENST00000456075 SHROOM1Q2M3G4 852 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-212ENST00000456075 SBK1Q52WX2 424 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 CCDC129Q6ZRS4 1044 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 TMEM179Q6ZVK1 233 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 IFNL3Q8IZI9 196 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 STK11IPQ8N1F8 1099 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 CCDC136Q96JN2 1154 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 CCDC17Q96LX7 622 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 SLC45A1Q9Y2W3 748 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 CASP8AP2Q9UKL3 1982 aa12.35□□□□□ -0.43
TOP3B-212ENST00000456075 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 A0A0D9SFI3 127 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 SDSP20132 328 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 PDE4AP27815 886 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 USP14P54578 494 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 IRX3P78415 501 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-212ENST00000456075 EVX2Q03828 476 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 PDE4BQ07343 736 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 MOGSQ13724 837 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 ZYXQ15942 572 aaKnown RBP12.34□□□□□ -0.43
TOP3B-212ENST00000456075 TTC22Q5TAA0 569 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 GPAT2Q6NUI2 795 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 USP17L2Q6R6M4 530 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 MCOLN1Q9GZU1 580 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
TOP3B-212ENST00000456075 EPB41L4AQ9HCS5 686 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms