RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 ZNF507Q8TCN5 953 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 NECAB3Q96P71 396 aaPredicted RBP4.71□□□□□ -1.66
LINC02540-201ENST00000455554 SLAMF8Q9P0V8 285 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 PCDHA4Q9UN74 947 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 SMG5Q9UPR3 1016 aaKnown RBP4.71□□□□□ -1.66
LINC02540-201ENST00000455554 ST14Q9Y5Y6 855 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 CAPN6Q9Y6Q1 641 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 WASH4PA8MWX3 477 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 PAGE1O75459 146 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 BMP6P22004 513 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 LINC00310P59036 64 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 KRTAP10-2P60368 255 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 LLGL2Q6P1M3 1020 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 NXPE4Q6UWF7 544 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 RIN3Q8TB24 985 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 ELMO3Q96BJ8 720 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 SLC26A8Q96RN1 970 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 MIPEPQ99797 713 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 RBCK1Q9BYM8 510 aa4.7□□□□□ -1.66
LINC02540-201ENST00000455554 ENC1O14682 589 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 LRRC14Q15048 493 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 SCARA3Q6AZY7 606 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 ZNF746Q6NUN9 644 aaPredicted RBP4.69□□□□□ -1.66
LINC02540-201ENST00000455554 TPTE2Q6XPS3 522 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 C3orf58Q8NDZ4 430 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 MYLIPQ8WY64 445 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 KCNN1Q92952 543 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 UBE2FQ969M7 185 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 CEP44Q9C0F1 390 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 FBRSQ9HAH7 460 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 ADAMTS20P59510 1910 aa4.69□□□□□ -1.66
LINC02540-201ENST00000455554 DNAJC25-GNG10A0A024R161 153 aa4.68□□□□□ -1.66
LINC02540-201ENST00000455554 PRAMEF27A3QJZ7 478 aa4.68□□□□□ -1.66
LINC02540-201ENST00000455554 CBX7O95931 251 aa4.68□□□□□ -1.66
LINC02540-201ENST00000455554 SRFP11831 508 aa4.68□□□□□ -1.66
LINC02540-201ENST00000455554 SLBPQ14493 270 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC02540-201ENST00000455554 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC02540-201ENST00000455554 RALGPS1Q5JS13 557 aa4.68□□□□□ -1.66
LINC02540-201ENST00000455554 MFSD2AQ8NA29 543 aa4.68□□□□□ -1.66
LINC02540-201ENST00000455554 ZSWIM5Q9P217 1185 aa4.68□□□□□ -1.66
LINC02540-201ENST00000455554 USTQ9Y2C2 406 aa4.68□□□□□ -1.66
LINC02540-201ENST00000455554 TRHRP34981 398 aaPredicted RBP4.67□□□□□ -1.66
LINC02540-201ENST00000455554 CAP2P40123 477 aa4.67□□□□□ -1.66
LINC02540-201ENST00000455554 HK2P52789 917 aa4.67□□□□□ -1.66
LINC02540-201ENST00000455554 PTPN11Q06124 597 aaPredicted RBP4.67□□□□□ -1.66
LINC02540-201ENST00000455554 LETMD1Q6P1Q0 360 aa4.67□□□□□ -1.66
LINC02540-201ENST00000455554 TMPRSS7Q7RTY8 843 aa4.67□□□□□ -1.66
LINC02540-201ENST00000455554 RELTQ969Z4 430 aa4.67□□□□□ -1.66
LINC02540-201ENST00000455554 IRF2BPLQ9H1B7 796 aa4.67□□□□□ -1.66
LINC02540-201ENST00000455554 PARD6AQ9NPB6 346 aa4.67□□□□□ -1.66
LINC02540-201ENST00000455554 TMEM59LQ9UK28 342 aa4.67□□□□□ -1.66
LINC02540-201ENST00000455554 PPM1HQ9ULR3 514 aa4.67□□□□□ -1.66
LINC02540-201ENST00000455554 A0A0G2JLL6 359 aaPredicted RBP4.66□□□□□ -1.66
LINC02540-201ENST00000455554 HPXP02790 462 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 CYP7A1P22680 504 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 GSTT1P30711 240 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 KIR3DL1P43629 444 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 INPP5AQ14642 412 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 NKG7Q16617 165 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 LRFN4Q6PJG9 635 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 HDXQ7Z353 690 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 COX4I2Q96KJ9 171 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 SP110Q9HB58 689 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 CYP8B1Q9UNU6 501 aa4.66□□□□□ -1.66
LINC02540-201ENST00000455554 FBXO24O75426 580 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 ESR1P03372 595 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 CDK8P49336 464 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 ETF1P62495 437 aaKnown RBP4.65□□□□□ -1.67
LINC02540-201ENST00000455554 TNK2Q07912 1038 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 TMC7Q7Z402 723 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 HID1Q8IV36 788 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 PLPPR2Q96GM1 343 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 SRCIN1Q9C0H9 1055 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 WNT10AQ9GZT5 417 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 RNF32Q9H0A6 362 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 ZCCHC4Q9H5U6 513 aa4.65□□□□□ -1.67
LINC02540-201ENST00000455554 PNMA6FA0A0J9YX94 578 aa4.64□□□□□ -1.67
LINC02540-201ENST00000455554 CST3P01034 146 aaPredicted RBP4.64□□□□□ -1.67
LINC02540-201ENST00000455554 PRAMEF13Q5VWM6 474 aa4.64□□□□□ -1.67
LINC02540-201ENST00000455554 PCNX4Q63HM2 1172 aa4.64□□□□□ -1.67
LINC02540-201ENST00000455554 TXNDC2Q86VQ3 553 aa4.64□□□□□ -1.67
LINC02540-201ENST00000455554 CREG2Q8IUH2 290 aa4.64□□□□□ -1.67
LINC02540-201ENST00000455554 PIWIL2Q8TC59 973 aaKnown RBP4.64□□□□□ -1.67
LINC02540-201ENST00000455554 ADAMTS10Q9H324 1103 aa4.64□□□□□ -1.67
LINC02540-201ENST00000455554 FOXD2O60548 495 aaPredicted RBP4.63□□□□□ -1.67
LINC02540-201ENST00000455554 BMP7P18075 431 aa4.63□□□□□ -1.67
LINC02540-201ENST00000455554 DLG4P78352 724 aa4.63□□□□□ -1.67
LINC02540-201ENST00000455554 ENOX2Q16206 610 aaKnown RBP4.63□□□□□ -1.67
LINC02540-201ENST00000455554 TIGD5Q53EQ6 642 aa4.63□□□□□ -1.67
LINC02540-201ENST00000455554 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.63□□□□□ -1.67
LINC02540-201ENST00000455554 IRF2BP1Q8IU81 584 aa4.63□□□□□ -1.67
LINC02540-201ENST00000455554 BAHD1Q8TBE0 780 aaPredicted RBP4.63□□□□□ -1.67
LINC02540-201ENST00000455554 ANKRD24Q8TF21 1146 aa4.63□□□□□ -1.67
LINC02540-201ENST00000455554 XAGE3Q8WTP9 111 aa4.63□□□□□ -1.67
LINC02540-201ENST00000455554 MCOLN1Q9GZU1 580 aa4.63□□□□□ -1.67
LINC02540-201ENST00000455554 C19orf44Q9H6X5 657 aa4.63□□□□□ -1.67
LINC02540-201ENST00000455554 SNCAIPQ9Y6H5 919 aa4.63□□□□□ -1.67
LINC02540-201ENST00000455554 MYOCOSA0A1B0GUC4 107 aa4.62□□□□□ -1.67
LINC02540-201ENST00000455554 SEMA7AO75326 666 aa4.62□□□□□ -1.67
LINC02540-201ENST00000455554 CELA3AP09093 270 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms