RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 PHOX2BQ99453 314 aa12.04□□□□□ -0.48
NIPSNAP1-204ENST00000455496 TBC1D2Q9BYX2 928 aa12.04□□□□□ -0.48
NIPSNAP1-204ENST00000455496 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
NIPSNAP1-204ENST00000455496 BAHCC1Q9P281 2608 aa12.04□□□□□ -0.48
NIPSNAP1-204ENST00000455496 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 GJD3Q8N144 294 aa12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 ZNF280CQ8ND82 737 aa12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 CNNM1Q9NRU3 951 aa12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 IQSEC3Q9UPP2 1182 aaPredicted RBP12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 CHD9Q3L8U1 2897 aa12.03□□□□□ -0.48
NIPSNAP1-204ENST00000455496 PLXNA1Q9UIW2 1896 aa12.02□□□□□ -0.48
NIPSNAP1-204ENST00000455496 PQBP1O60828 265 aaKnown RBP12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 TIMP1P01033 207 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 POU3F3P20264 500 aaPredicted RBP12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ERVK-9P63128 1117 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ERVK-24P63145 666 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 HNRNPUQ00839 825 aaKnown RBP eCLIP12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 GCKRQ14397 625 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 TAF7LQ5H9L4 462 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PPP2R2DQ66LE6 453 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 GTF3C2Q8WUA4 911 aaPredicted RBP12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 COL26A1Q96A83 441 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CHMP4AQ9BY43 222 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PORCNQ9H237 461 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 MTIF3Q9H2K0 278 aaKnown RBP12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 TXNRD2Q9NNW7 524 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 IFT57Q9NWB7 429 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CHMP3Q9Y3E7 222 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 IL16Q14005 1332 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ATRNL1Q5VV63 1379 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 FRMPD3Q5JV73 1810 aa12.02□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PTPRFP10586 1907 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 LRRC37A2A6NM11 1700 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 SLC5A1P13866 664 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 SSTR3P32745 418 aaPredicted RBP12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CYP2C19P33261 490 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 HERVK_113P62684 666 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 GNAI1P63096 354 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 LRRC41Q15345 812 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 Q3C1V9 767 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CAVIN4Q5BKX8 364 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 SH3D19Q5HYK7 790 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 MFSD5Q6N075 450 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PSRC1Q6PGN9 363 aaPredicted RBP12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 FBXO33Q7Z6M2 555 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 WDR63Q8IWG1 891 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 MFSD14AQ96MC6 490 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 TOX2Q96NM4 488 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 USP40Q9NVE5 1235 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 RBPJLQ9UBG7 517 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 MTCH2Q9Y6C9 303 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ZNF521Q96K83 1311 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 USP34Q70CQ2 3546 aa12.01□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CACNA1BQ00975 2339 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 GFRA3O60609 400 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PEX10O60683 326 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ZNF853P0CG23 659 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CYBAP13498 195 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 HOXA7P31268 230 aaPredicted RBP12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PTPN5P54829 565 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CCDC57Q2TAC2 916 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ANO1Q5XXA6 986 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ZNF365Q70YC5 407 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 C16orf59Q7L2K0 433 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 TRPV1Q8NER1 839 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 YBX2Q9Y2T7 364 aaKnown RBP12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 REV3LO60673 3130 aa12□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PRRC2BQ5JSZ5 2229 aaKnown RBP11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CHD7Q9P2D1 2997 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 SLC15A5A6NIM6 579 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 SEPT4O43236 478 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ENTPD3O75355 529 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 HOXC6P09630 235 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CASP7P55210 303 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CCNA1P78396 465 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 FAAP100Q0VG06 881 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 FAM178BQ8IXR5 827 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 TMEM199Q8N511 208 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 TMOD4Q9NZQ9 345 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PHF24Q9UPV7 400 aa11.99□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PTPRZ1P23471 2315 aaPredicted RBP11.98□□□□□ -0.49
NIPSNAP1-204ENST00000455496 DCXO43602 365 aa11.98□□□□□ -0.49
NIPSNAP1-204ENST00000455496 CCDC30Q5VVM6 783 aa11.98□□□□□ -0.49
NIPSNAP1-204ENST00000455496 ANKRD33Q7Z3H0 272 aa11.98□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PRRX2Q99811 253 aa11.98□□□□□ -0.49
NIPSNAP1-204ENST00000455496 PAGR1Q9BTK6 254 aa11.98□□□□□ -0.49
NIPSNAP1-204ENST00000455496 OSBPL5Q9H0X9 879 aaPredicted RBP11.98□□□□□ -0.49
NIPSNAP1-204ENST00000455496 MYH16Q9H6N6 1097 aa11.98□□□□□ -0.49
NIPSNAP1-204ENST00000455496 AS3MTQ9HBK9 375 aa11.98□□□□□ -0.49
NIPSNAP1-204ENST00000455496 IVNS1ABPQ9Y6Y0 642 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms