RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 MKNK2Q9HBH9 465 aa7.95□□□□□ -1.14
ECHDC1-210ENST00000454859 DICER1Q9UPY3 1922 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 VPS37CA5D8V6 355 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 TSPY2A6NKD2 308 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 YEATS4O95619 227 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 BMP15O95972 392 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 MYCNP04198 464 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 KCNA3P22001 575 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 GABPAQ06546 454 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 STK3Q13188 491 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 SAFBQ15424 915 aaKnown RBP eCLIP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 DALRD3Q5D0E6 543 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 RCSD1Q6JBY9 416 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 DEFB132Q7Z7B7 95 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 CTCFLQ8NI51 663 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 GINM1Q9NU53 330 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 RCOR1Q9UKL0 485 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 RANBP6O60518 1105 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 CRKP46108 304 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 AKAP17AQ02040 695 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 TROAPQ12815 778 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 TNIP1Q15025 636 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 CRACR2BQ8N4Y2 399 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 TGFBRAP1Q8WUH2 860 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 LRRC2Q9BYS8 371 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 FOXP1Q9H334 677 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 TOMM22Q9NS69 142 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 ZNRF3Q9ULT6 936 aa7.94□□□□□ -1.14
ECHDC1-210ENST00000454859 SRCAPQ6ZRS2 3230 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 RIMBP2O15034 1052 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 PPIP5K2O43314 1243 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 JAK2O60674 1132 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 PRPF40AO75400 957 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 TOP1P11387 765 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 FDPSP14324 419 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 U2AF2P26368 475 aaKnown RBP eCLIP7.93□□□□□ -1.148e-7■■■■□ 25.7
ECHDC1-210ENST00000454859 CHRNA5P30532 468 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 CCT2P78371 535 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 DIXDC1Q155Q3 683 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 RRP12Q5JTH9 1297 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 APOBEC3HQ6NTF7 200 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 RSBN1LQ6PCB5 846 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 CERS5Q8N5B7 392 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 JMYQ8N9B5 988 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 KCNG4Q8TDN1 519 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 OSBPL5Q9H0X9 879 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 KAT14Q9H8E8 782 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 FAM217BQ9NTX9 383 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 RTEL1Q9NZ71 1219 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 PI4KBQ9UBF8 816 aa7.93□□□□□ -1.14
ECHDC1-210ENST00000454859 CAVIN2O95810 425 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 TSPY3P0CV98 308 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 TSPY8P0CW00 308 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 DPEP1P16444 411 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 CALML3P27482 149 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 CDK8P49336 464 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 GRM4Q14833 912 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 CDC37L1Q7L3B6 337 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 CHST3Q7LGC8 479 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 USP48Q86UV5 1035 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 NIM1KQ8IY84 436 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 SGIP1Q9BQI5 828 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 ALG1Q9BT22 464 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 BRMS1Q9HCU9 246 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 USP40Q9NVE5 1235 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 TMOD2Q9NZR1 351 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 HERC5Q9UII4 1024 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 SERPINB13Q9UIV8 391 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 NAP1L2Q9ULW6 460 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 TACC3Q9Y6A5 838 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 EP400Q96L91 3159 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 FSD2A1L4K1 749 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 WDHD1O75717 1129 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 USP17L8P0C7I0 530 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 RASA1P20936 1047 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 NASPP49321 788 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 TFAP4Q01664 338 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 COL9A3Q14050 684 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 CDC42EP5Q6NZY7 148 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 TMTC3Q6ZXV5 915 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 NBPF11Q86T75 865 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 FAM83AQ86UY5 434 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 MICU3Q86XE3 530 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 OGFOD1Q8N543 542 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 CCDC12Q8WUD4 166 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 GMLQ99445 158 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 LARP6Q9BRS8 491 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 SPZ1Q9BXG8 430 aa7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 DDX19AQ9NUU7 478 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-210ENST00000454859 A0A1W2PQ27 194 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 A0A1W2PQ64 194 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 A0A1W2PQD8 194 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 CTAGE5O15320 804 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 TBC1D12O60347 775 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 TRAPPC10P48553 1259 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 MRE11P49959 708 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 FUT2Q10981 343 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 TRAF1Q13077 416 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 ORC2Q13416 577 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms