RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 PTPRFP10586 1907 aa22.99■■□□□ 1.27
NCL-205ENST00000453992 GREB1LQ9C091 1923 aaPredicted RBP22.98■■□□□ 1.27
NCL-205ENST00000453992 ASNSP08243 561 aa22.98■■□□□ 1.27
NCL-205ENST00000453992 CDK8P49336 464 aa22.98■■□□□ 1.27
NCL-205ENST00000453992 PPATQ06203 517 aa22.98■■□□□ 1.27
NCL-205ENST00000453992 RRP1BQ14684 758 aaKnown RBP22.98■■□□□ 1.27
NCL-205ENST00000453992 CERKLQ49MI3 558 aaPredicted RBP22.98■■□□□ 1.27
NCL-205ENST00000453992 SLC44A5Q8NCS7 719 aa22.98■■□□□ 1.27
NCL-205ENST00000453992 TBC1D2Q9BYX2 928 aa22.98■■□□□ 1.27
NCL-205ENST00000453992 CTNNA3Q9UI47 895 aa22.98■■□□□ 1.27
NCL-205ENST00000453992 SMIM22K7EJ46 135 aa22.97■■□□□ 1.27
NCL-205ENST00000453992 HSPA1AP0DMV8 641 aaKnown RBP22.97■■□□□ 1.27
NCL-205ENST00000453992 HSPA1BP0DMV9 641 aaKnown RBP22.97■■□□□ 1.27
NCL-205ENST00000453992 PTPRAP18433 802 aa22.97■■□□□ 1.27
NCL-205ENST00000453992 MAP2K2P36507 400 aa22.97■■□□□ 1.27
NCL-205ENST00000453992 PPIL2Q13356 520 aa22.97■■□□□ 1.27
NCL-205ENST00000453992 ZBTB21Q9ULJ3 1066 aa22.97■■□□□ 1.27
NCL-205ENST00000453992 AOC2O75106 756 aa22.96■■□□□ 1.27
NCL-205ENST00000453992 GDF11O95390 407 aa22.96■■□□□ 1.27
NCL-205ENST00000453992 PDE4BQ07343 736 aa22.96■■□□□ 1.27
NCL-205ENST00000453992 KIAA1211Q6ZU35 1233 aa22.96■■□□□ 1.27
NCL-205ENST00000453992 OTUD5Q96G74 571 aa22.96■■□□□ 1.27
NCL-205ENST00000453992 CCDC17Q96LX7 622 aa22.96■■□□□ 1.27
NCL-205ENST00000453992 GJA5P36382 358 aa22.95■■□□□ 1.26
NCL-205ENST00000453992 ABCB5Q2M3G0 1257 aa22.95■■□□□ 1.26
NCL-205ENST00000453992 REM2Q8IYK8 340 aaPredicted RBP22.95■■□□□ 1.26
NCL-205ENST00000453992 GH2P01242 217 aa22.94■■□□□ 1.26
NCL-205ENST00000453992 PCP11498 1178 aaKnown RBP22.94■■□□□ 1.26
NCL-205ENST00000453992 CNKSR2Q8WXI2 1034 aa22.94■■□□□ 1.26
NCL-205ENST00000453992 ZIC5Q96T25 663 aa22.94■■□□□ 1.26
NCL-205ENST00000453992 MKNK2Q9HBH9 465 aa22.94■■□□□ 1.26
NCL-205ENST00000453992 CABP5Q9NP86 173 aa22.94■■□□□ 1.26
NCL-205ENST00000453992 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.94■■□□□ 1.26
NCL-205ENST00000453992 U3KPZ7 1027 aaPredicted RBP22.94■■□□□ 1.26
NCL-205ENST00000453992 MANSC4A6NHS7 340 aaPredicted RBP22.93■■□□□ 1.26
NCL-205ENST00000453992 USP17L5A8MUK1 530 aa22.93■■□□□ 1.26
NCL-205ENST00000453992 ZNF213O14771 459 aa22.93■■□□□ 1.26
NCL-205ENST00000453992 PTH1RQ03431 593 aa22.93■■□□□ 1.26
NCL-205ENST00000453992 IMMTQ16891 758 aaKnown RBP22.93■■□□□ 1.26
NCL-205ENST00000453992 TMEM179Q6ZVK1 233 aa22.93■■□□□ 1.26
NCL-205ENST00000453992 MAP4K1Q92918 833 aa22.93■■□□□ 1.26
NCL-205ENST00000453992 AS3MTQ9HBK9 375 aa22.93■■□□□ 1.26
NCL-205ENST00000453992 KCNH4Q9UQ05 1017 aa22.93■■□□□ 1.26
NCL-205ENST00000453992 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.93■■□□□ 1.26
NCL-205ENST00000453992 LOC285556D6RIA3 1793 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 IRF6O14896 467 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 FGRP09769 529 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 RASA1P20936 1047 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 NT5C2P49902 561 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 JAG1P78504 1218 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 CTDSPL2Q05D32 466 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 LSG1Q9H089 658 aaKnown RBP22.92■■□□□ 1.26
NCL-205ENST00000453992 RNF41Q9H4P4 317 aaPredicted RBP22.92■■□□□ 1.26
NCL-205ENST00000453992 WBP1LQ9NX94 342 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 AFG3L2Q9Y4W6 797 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 ZHX2Q9Y6X8 837 aa22.92■■□□□ 1.26
NCL-205ENST00000453992 PLIN4Q96Q06 1357 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 CXCL11O14625 94 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 ORC4O43929 436 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 AKR1B1P15121 316 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 GTF2A2P52657 109 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 KIF23Q02241 960 aaPredicted RBP22.91■■□□□ 1.26
NCL-205ENST00000453992 SREBF2Q12772 1141 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 SNAPC2Q13487 334 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 STAG1Q8WVM7 1258 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 WDR18Q9BV38 432 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 ANO2Q9NQ90 1003 aa22.91■■□□□ 1.26
NCL-205ENST00000453992 MPHOSPH10O00566 681 aaKnown RBP22.9■■□□□ 1.26
NCL-205ENST00000453992 INHBEP58166 350 aa22.9■■□□□ 1.26
NCL-205ENST00000453992 HAND2P61296 217 aa22.9■■□□□ 1.26
NCL-205ENST00000453992 MKRN3Q13064 507 aaKnown RBP22.9■■□□□ 1.26
NCL-205ENST00000453992 SHROOM1Q2M3G4 852 aaPredicted RBP22.9■■□□□ 1.26
NCL-205ENST00000453992 ZNF444Q8N0Y2 327 aaPredicted RBP22.9■■□□□ 1.26
NCL-205ENST00000453992 STK11IPQ8N1F8 1099 aa22.9■■□□□ 1.26
NCL-205ENST00000453992 ZNF280CQ8ND82 737 aa22.9■■□□□ 1.26
NCL-205ENST00000453992 NBPF3Q9H094 633 aa22.9■■□□□ 1.26
NCL-205ENST00000453992 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.9■■□□□ 1.26
NCL-205ENST00000453992 TESPA1A2RU30 521 aaPredicted RBP22.89■■□□□ 1.25
NCL-205ENST00000453992 FOXN1O15353 648 aa22.89■■□□□ 1.25
NCL-205ENST00000453992 PRDM1O75626 825 aa22.89■■□□□ 1.25
NCL-205ENST00000453992 RAB3GAP1Q15042 981 aa22.89■■□□□ 1.25
NCL-205ENST00000453992 AKNAD1Q5T1N1 836 aa22.89■■□□□ 1.25
NCL-205ENST00000453992 IFFO2Q5TF58 517 aa22.89■■□□□ 1.25
NCL-205ENST00000453992 TBC1D10CQ8IV04 446 aa22.89■■□□□ 1.25
NCL-205ENST00000453992 MS4A4AQ96JQ5 239 aa22.89■■□□□ 1.25
NCL-205ENST00000453992 CETPP11597 493 aa22.88■■□□□ 1.25
NCL-205ENST00000453992 GUCY1A2P33402 732 aa22.88■■□□□ 1.25
NCL-205ENST00000453992 MFSD6Q6ZSS7 791 aa22.88■■□□□ 1.25
NCL-205ENST00000453992 RBM8AQ9Y5S9 174 aaKnown RBP22.88■■□□□ 1.25
NCL-205ENST00000453992 MYH4Q9Y623 1939 aa22.88■■□□□ 1.25
NCL-205ENST00000453992 A0A0G2JLL6 359 aaPredicted RBP22.87■■□□□ 1.25
NCL-205ENST00000453992 REC8O95072 547 aa22.87■■□□□ 1.25
NCL-205ENST00000453992 TM4SF4P48230 202 aa22.87■■□□□ 1.25
NCL-205ENST00000453992 MAP2K1Q02750 393 aaPredicted RBP22.87■■□□□ 1.25
NCL-205ENST00000453992 SEPT2Q15019 361 aa22.87■■□□□ 1.25
NCL-205ENST00000453992 PRRT2Q7Z6L0 340 aaPredicted RBP22.87■■□□□ 1.25
NCL-205ENST00000453992 CCDC84Q86UT8 332 aaPredicted RBP22.87■■□□□ 1.25
NCL-205ENST00000453992 CCL15-CCL14A0A0B4J2E2 113 aa22.86■■□□□ 1.25
NCL-205ENST00000453992 TRIM75PA6NK02 468 aa22.86■■□□□ 1.25
NCL-205ENST00000453992 SPP2Q13103 211 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms