RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 SRGAP2O75044 1071 aa15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 TBC1D10CQ8IV04 446 aa15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 ENOX1Q8TC92 643 aaKnown RBP15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 TRIM47Q96LD4 638 aa15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 EBAG9O00559 213 aa15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 PLCD1P51178 756 aa15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 STIM1Q13586 685 aa15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 RNF187Q5TA31 235 aaPredicted RBP15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 PROSER2Q86WR7 435 aaPredicted RBP15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 SLC4A4Q9Y6R1 1079 aa15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 MAP3K12Q12852 859 aa15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 ATG9AQ7Z3C6 839 aa15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 DDX17Q92841 729 aaKnown RBP15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 LUC7L2Q9Y383 392 aaKnown RBP15.67■□□□□ 0.1
UBE2D3-210ENST00000453744 EIF3CLB5ME19 914 aaKnown RBP15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 EIF3CQ99613 913 aaKnown RBP15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 GUCY1A2P33402 732 aa15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 MCM7P33993 719 aa15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 CCT5P48643 541 aa15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 TMTC1Q8IUR5 882 aa15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 FAM76AQ8TAV0 307 aa15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 HDAC6Q9UBN7 1215 aa15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 TRMT112Q9UI30 125 aaKnown RBP15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 NLRP5P59047 1200 aa15.66■□□□□ 0.1
UBE2D3-210ENST00000453744 SPATA1Q5VX52 437 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 CYP26C1Q6V0L0 522 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 NOA1Q8NC60 698 aaKnown RBP15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 TMEM87BQ96K49 555 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 SPA17Q15506 151 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 CCDC96Q2M329 555 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 V9GY48 417 aaPredicted RBP15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 CLTCQ00610 1675 aaKnown RBP15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 ANKRD18BA2A2Z9 1011 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 GOLGA6CA6NDK9 693 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 GOLGA6DP0CG33 693 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 PHKG2P15735 406 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 MTIF2P46199 727 aaKnown RBP15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 SND1Q7KZF4 910 aaKnown RBP eCLIP15.65■□□□□ 0.13e-6■□□□□ 8.1
UBE2D3-210ENST00000453744 ARHGEF25Q86VW2 580 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 FAM71BQ8TC56 605 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 INTS13Q9NVM9 706 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 GOLGA6AQ9NYA3 693 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 TFR2Q9UP52 801 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 JRKLQ9Y4A0 524 aa15.65■□□□□ 0.1
UBE2D3-210ENST00000453744 IDEP14735 1019 aa15.64■□□□□ 0.09
UBE2D3-210ENST00000453744 OXER1Q8TDS5 423 aa15.64■□□□□ 0.09
UBE2D3-210ENST00000453744 PPM1EQ8WY54 764 aa15.64■□□□□ 0.09
UBE2D3-210ENST00000453744 PATL2C9JE40 543 aaKnown RBP15.64■□□□□ 0.09
UBE2D3-210ENST00000453744 CCDC47Q96A33 483 aaKnown RBP15.64■□□□□ 0.09
UBE2D3-210ENST00000453744 TANGO6Q9C0B7 1094 aa15.64■□□□□ 0.09
UBE2D3-210ENST00000453744 TRIM10Q9UDY6 481 aa15.64■□□□□ 0.09
UBE2D3-210ENST00000453744 SH2B2O14492 632 aaPredicted RBP15.64■□□□□ 0.09
UBE2D3-210ENST00000453744 ZSWIM5Q9P217 1185 aa15.64■□□□□ 0.09
UBE2D3-210ENST00000453744 SNAP23O00161 211 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 FANCGO15287 622 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 SYMPKQ92797 1274 aaKnown RBP15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 DCAF5Q96JK2 942 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 POLD4Q9HCU8 107 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 MCM3P25205 808 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 FXR1P51114 621 aaKnown RBP eCLIP15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 EVA1CP58658 441 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 TTF1Q15361 905 aaPredicted RBP15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 WHAMMP3Q1A5X7 153 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 SAR1BQ9Y6B6 198 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 EPN1Q9Y6I3 576 aaPredicted RBP15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 SALL1Q9NSC2 1324 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 MFAP3LO75121 409 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 ATP2C2O75185 946 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 RDXP35241 583 aaKnown RBP15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 RSRC2Q7L4I2 434 aaKnown RBP15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 MKRN1Q9UHC7 482 aaKnown RBP15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 SAMM50Q9Y512 469 aa15.63■□□□□ 0.09
UBE2D3-210ENST00000453744 FAM205CA6NFA0 338 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 KRT86O43790 486 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 MYO1BO43795 1136 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 BMP6P22004 513 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 BEND6Q5SZJ8 279 aaPredicted RBP15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 NAA15Q9BXJ9 866 aaKnown RBP15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 UTYO14607 1347 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 GOLGA6BA6NDN3 693 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 DEXIO95424 95 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 RNASE9P60153 205 aaKnown RBP15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 ANKLE2Q86XL3 938 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 UBN2Q6ZU65 1347 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 PRKAB2O43741 272 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 PDE6AP16499 860 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 ITGA6P23229 1130 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 FOXO4P98177 505 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 SPAG1Q07617 926 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 BCAS4Q8TDM0 211 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 NELFBQ8WX92 580 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 KRT23Q9C075 422 aa15.62■□□□□ 0.09
UBE2D3-210ENST00000453744 STAT6P42226 847 aa15.61■□□□□ 0.09
UBE2D3-210ENST00000453744 PTPAQ15257 358 aa15.61■□□□□ 0.09
UBE2D3-210ENST00000453744 IQCEQ6IPM2 695 aa15.61■□□□□ 0.09
UBE2D3-210ENST00000453744 AGXT2Q9BYV1 514 aa15.61■□□□□ 0.09
UBE2D3-210ENST00000453744 KCND1Q9NSA2 647 aa15.61■□□□□ 0.09
UBE2D3-210ENST00000453744 AKR1B10O60218 316 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms