RNA–Protein interactions for RNA: ENST00000453640.1

SSXP1-201, Transcript of SSX family pseudogene 1, humanhuman

BASIC

Gene SSXP1, Length 473 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP1-201ENST00000453640 TNKS2Q9H2K2 1166 aa6.55□□□□□ -1.36
SSXP1-201ENST00000453640 GTF2IRD1Q9UHL9 959 aa6.55□□□□□ -1.36
SSXP1-201ENST00000453640 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
SSXP1-201ENST00000453640 PRR33A8MZF0 331 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 IFI16Q16666 785 aaKnown RBP6.54□□□□□ -1.36
SSXP1-201ENST00000453640 NKPD1Q17RQ9 610 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 LETMD1Q6P1Q0 360 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 FBXL19Q6PCT2 694 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 SPACA3Q8IXA5 215 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 MFSD2AQ8NA29 543 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 FBXL18Q96ME1 805 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 KCNQ5Q9NR82 932 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 ADGRE2Q9UHX3 823 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 GGT7Q9UJ14 662 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 SLC5A6Q9Y289 635 aa6.54□□□□□ -1.36
SSXP1-201ENST00000453640 UPK3BL1B0FP48 263 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 UPK3BL2E5RIL1 263 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 BPNT1O95861 308 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 PDE4BQ07343 736 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 SLC6A19Q695T7 634 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 FAM196AQ6ZSG2 479 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 ARHGAP27Q6ZUM4 889 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 MCATQ8IVS2 390 aaKnown RBP6.53□□□□□ -1.36
SSXP1-201ENST00000453640 TP53INP2Q8IXH6 220 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 TMEM87AQ8NBN3 555 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 BACH2Q9BYV9 841 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 PRDM5Q9NQX1 630 aaPredicted RBP6.53□□□□□ -1.36
SSXP1-201ENST00000453640 ADAMTS1Q9UHI8 967 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 ADAM30Q9UKF2 790 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 VAV3Q9UKW4 847 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 MAPK8IP1Q9UQF2 711 aa6.53□□□□□ -1.36
SSXP1-201ENST00000453640 TMEM265A0A087WTH1 108 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 TLR3O15455 904 aaKnown RBP6.52□□□□□ -1.37
SSXP1-201ENST00000453640 GRIN3BO60391 1043 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 GREM1O60565 184 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 CD8BP10966 210 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 PLCG1P19174 1290 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 EIF4A3P38919 411 aaKnown RBP6.52□□□□□ -1.37
SSXP1-201ENST00000453640 PRKCQQ04759 706 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 HS2ST1Q7LGA3 356 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 REC114Q7Z4M0 266 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 CDH24Q86UP0 819 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 STK11IPQ8N1F8 1099 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 MISP3Q96FF7 219 aa6.52□□□□□ -1.37
SSXP1-201ENST00000453640 TPX2Q9ULW0 747 aaKnown RBP6.52□□□□□ -1.37
SSXP1-201ENST00000453640 PRR36Q9H6K5 1346 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 DNAJA2O60884 412 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 CRKP46108 304 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 IRAK1P51617 712 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 MPP2Q14168 576 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 AOC3Q16853 763 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 TMEM201Q5SNT2 666 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 DNAJB8Q8NHS0 232 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 ZNF296Q8WUU4 475 aaPredicted RBP6.51□□□□□ -1.37
SSXP1-201ENST00000453640 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 REV1Q9UBZ9 1251 aa6.51□□□□□ -1.37
SSXP1-201ENST00000453640 COL17A1Q9UMD9 1497 aaPredicted RBP6.51□□□□□ -1.37
SSXP1-201ENST00000453640 GNAT3A8MTJ3 354 aa6.5□□□□□ -1.37
SSXP1-201ENST00000453640 HTR3BO95264 441 aa6.5□□□□□ -1.37
SSXP1-201ENST00000453640 ZNF865P0CJ78 1059 aaPredicted RBP6.5□□□□□ -1.37
SSXP1-201ENST00000453640 SFRP5Q5T4F7 317 aa6.5□□□□□ -1.37
SSXP1-201ENST00000453640 C22orf34Q6ZV56 151 aa6.5□□□□□ -1.37
SSXP1-201ENST00000453640 CBLL1Q75N03 491 aa6.5□□□□□ -1.37
SSXP1-201ENST00000453640 PPP1R13LQ8WUF5 828 aa6.5□□□□□ -1.37
SSXP1-201ENST00000453640 LRRC3Q9BY71 257 aa6.5□□□□□ -1.37
SSXP1-201ENST00000453640 SUPT16HQ9Y5B9 1047 aaKnown RBP6.5□□□□□ -1.37
SSXP1-201ENST00000453640 SNX11Q9Y5W9 270 aa6.5□□□□□ -1.37
SSXP1-201ENST00000453640 CHURC1-FNTBB4DL54 471 aa6.49□□□□□ -1.37
SSXP1-201ENST00000453640 FANCCQ00597 558 aa6.49□□□□□ -1.37
SSXP1-201ENST00000453640 DIEXFQ68CQ4 756 aaKnown RBP6.49□□□□□ -1.37
SSXP1-201ENST00000453640 MFSD4AQ8N468 514 aa6.49□□□□□ -1.37
SSXP1-201ENST00000453640 AGBL5Q8NDL9 886 aa6.49□□□□□ -1.37
SSXP1-201ENST00000453640 FAM13CQ8NE31 585 aa6.49□□□□□ -1.37
SSXP1-201ENST00000453640 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
SSXP1-201ENST00000453640 BCL11AQ9H165 835 aa6.49□□□□□ -1.37
SSXP1-201ENST00000453640 CAPN6Q9Y6Q1 641 aa6.49□□□□□ -1.37
SSXP1-201ENST00000453640 PITPNM2Q9BZ72 1349 aa6.49□□□□□ -1.37
SSXP1-201ENST00000453640 ROBO2Q9HCK4 1378 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 CBX7O95931 251 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 RECKO95980 971 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 TAL1P17542 331 aaPredicted RBP6.48□□□□□ -1.37
SSXP1-201ENST00000453640 FUT4P22083 530 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 ZNF76P36508 570 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 PLCL1Q15111 1095 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 CYB5D2Q8WUJ1 264 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 BRMS1Q9HCU9 246 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 SEMA3GQ9NS98 782 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 UBP1Q9NZI7 540 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 ADAMTS6Q9UKP5 1117 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 CEP131Q9UPN4 1083 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 ST14Q9Y5Y6 855 aa6.48□□□□□ -1.37
SSXP1-201ENST00000453640 CLCN7P51798 805 aa6.47□□□□□ -1.37
SSXP1-201ENST00000453640 ZNF792Q3KQV3 632 aa6.47□□□□□ -1.37
SSXP1-201ENST00000453640 CDKAL1Q5VV42 579 aa6.47□□□□□ -1.37
SSXP1-201ENST00000453640 RGS22Q8NE09 1264 aa6.47□□□□□ -1.37
SSXP1-201ENST00000453640 HSPA12BQ96MM6 686 aa6.47□□□□□ -1.37
SSXP1-201ENST00000453640 MBNL3Q9NUK0 354 aaKnown RBP6.47□□□□□ -1.37
SSXP1-201ENST00000453640 KLHL3Q9UH77 587 aa6.47□□□□□ -1.37
SSXP1-201ENST00000453640 UNCXA6NJT0 531 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms