RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 SPDYE5A6NIY4 337 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 ASNSP08243 561 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 SLC10A3P09131 477 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 CDK8P49336 464 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 NT5C2P49902 561 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 ZNF157P51786 506 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 DEFB115Q30KQ5 88 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 CERKLQ49MI3 558 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 RASAL3Q86YV0 1011 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 SLC44A5Q8NCS7 719 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 ZKSCAN4Q969J2 545 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 CCDC102AQ96A19 550 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 CLMNQ96JQ2 1002 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 CCDC17Q96LX7 622 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 TBC1D2Q9BYX2 928 aa17.32■□□□□ 0.36
TRAPPC12-211ENST00000452495 SMIM22K7EJ46 135 aa17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 ZNF213O14771 459 aa17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 EPB41L2O43491 1005 aaKnown RBP17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 ZBTB48P10074 688 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 ERO1BQ86YB8 467 aa17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 STAG1Q8WVM7 1258 aa17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 SLC10A4Q96EP9 437 aa17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 RNF41Q9H4P4 317 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 ELP3Q9H9T3 547 aa17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 ZBTB21Q9ULJ3 1066 aa17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 RBM8AQ9Y5S9 174 aaKnown RBP17.31■□□□□ 0.36
TRAPPC12-211ENST00000452495 ORC4O43929 436 aa17.3■□□□□ 0.36
TRAPPC12-211ENST00000452495 GDF11O95390 407 aa17.3■□□□□ 0.36
TRAPPC12-211ENST00000452495 HAND2P61296 217 aa17.3■□□□□ 0.36
TRAPPC12-211ENST00000452495 CTDSPL2Q05D32 466 aa17.3■□□□□ 0.36
TRAPPC12-211ENST00000452495 RRP1BQ14684 758 aaKnown RBP17.3■□□□□ 0.36
TRAPPC12-211ENST00000452495 ABCB5Q2M3G0 1257 aa17.3■□□□□ 0.36
TRAPPC12-211ENST00000452495 PAXIP1Q6ZW49 1069 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC12-211ENST00000452495 WNK4Q96J92 1243 aa17.3■□□□□ 0.36
TRAPPC12-211ENST00000452495 MKNK2Q9HBH9 465 aa17.3■□□□□ 0.36
TRAPPC12-211ENST00000452495 FGRP09769 529 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 PTPRAP18433 802 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 RASA1P20936 1047 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 HTRA3P83110 453 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 PPATQ06203 517 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 PPIL2Q13356 520 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 AKNAD1Q5T1N1 836 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 TMEM179Q6ZVK1 233 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 TBC1D10CQ8IV04 446 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 OPTNQ96CV9 577 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 CAPNS2Q96L46 248 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 NBPF3Q9H094 633 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
TRAPPC12-211ENST00000452495 FAM155AB1AL88 458 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 GH2P01242 217 aa17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 NOGQ13253 232 aa17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 SPRYD7Q5W111 196 aa17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 CYP4F22Q6NT55 531 aa17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 MFSD6Q6ZSS7 791 aa17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 OTUD5Q96G74 571 aa17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 CNNM2Q9H8M5 875 aa17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 AS3MTQ9HBK9 375 aa17.28■□□□□ 0.36
TRAPPC12-211ENST00000452495 USP17L5A8MUK1 530 aa17.27■□□□□ 0.36
TRAPPC12-211ENST00000452495 MPHOSPH10O00566 681 aaKnown RBP17.27■□□□□ 0.36
TRAPPC12-211ENST00000452495 CYP21A2P08686 494 aa17.27■□□□□ 0.36
TRAPPC12-211ENST00000452495 AKR1B1P15121 316 aa17.27■□□□□ 0.36
TRAPPC12-211ENST00000452495 ZNF444Q8N0Y2 327 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC12-211ENST00000452495 STK11IPQ8N1F8 1099 aa17.27■□□□□ 0.36
TRAPPC12-211ENST00000452495 NEDD4P46934 1319 aa17.26■□□□□ 0.35
TRAPPC12-211ENST00000452495 WDR33Q9C0J8 1336 aaKnown RBP17.26■□□□□ 0.35
TRAPPC12-211ENST00000452495 PRDM1O75626 825 aa17.26■□□□□ 0.35
TRAPPC12-211ENST00000452495 NECTIN1Q15223 517 aa17.26■□□□□ 0.35
TRAPPC12-211ENST00000452495 WDR18Q9BV38 432 aa17.26■□□□□ 0.35
TRAPPC12-211ENST00000452495 KCNH4Q9UQ05 1017 aa17.26■□□□□ 0.35
TRAPPC12-211ENST00000452495 TSPY2A6NKD2 308 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 TSPY3P0CV98 308 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 TSPY8P0CW00 308 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 GJA5P36382 358 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 VEGFBP49765 207 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 JAG1P78504 1218 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 SHROOM1Q2M3G4 852 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 PPP4R3BQ5MIZ7 849 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 CREB3L3Q68CJ9 461 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 REM2Q8IYK8 340 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 NEDD1Q8NHV4 660 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 ESR2Q92731 530 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 KRT23Q9C075 422 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 TOMM22Q9NS69 142 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 PARP14Q460N5 1801 aa17.25■□□□□ 0.35
TRAPPC12-211ENST00000452495 MANSC4A6NHS7 340 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 IRF6O14896 467 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 SLC27A2O14975 620 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 GUCY1A2P33402 732 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 MAP2K2P36507 400 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 GTF2A2P52657 109 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 ICA1Q05084 483 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 TRDNQ13061 729 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 SEPT2Q15019 361 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 RAB3GAP1Q15042 981 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 ZNF280CQ8ND82 737 aa17.24■□□□□ 0.35
TRAPPC12-211ENST00000452495 KANSL2Q9H9L4 492 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms