RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 GRK4P32298 578 aa26.19■■□□□ 1.78
C9orf3-208ENST00000451893 MTMR2Q13614 643 aa26.19■■□□□ 1.78
C9orf3-208ENST00000451893 ANKRD13CQ8N6S4 541 aa26.19■■□□□ 1.78
C9orf3-208ENST00000451893 CCDC136Q96JN2 1154 aa26.19■■□□□ 1.78
C9orf3-208ENST00000451893 TAOK2Q9UL54 1235 aa26.19■■□□□ 1.78
C9orf3-208ENST00000451893 LOC285556D6RIA3 1793 aa26.18■■□□□ 1.78
C9orf3-208ENST00000451893 POLR3DP05423 398 aaPredicted RBP26.18■■□□□ 1.78
C9orf3-208ENST00000451893 UBXN2AP68543 259 aa26.18■■□□□ 1.78
C9orf3-208ENST00000451893 IRX3P78415 501 aaPredicted RBP26.18■■□□□ 1.78
C9orf3-208ENST00000451893 PRPF38BQ5VTL8 546 aaKnown RBP26.18■■□□□ 1.78
C9orf3-208ENST00000451893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.18■■□□□ 1.78
C9orf3-208ENST00000451893 CRNKL1Q9BZJ0 848 aaKnown RBP26.18■■□□□ 1.78
C9orf3-208ENST00000451893 GINM1Q9NU53 330 aa26.18■■□□□ 1.78
C9orf3-208ENST00000451893 CTGFP29279 349 aa26.17■■□□□ 1.78
C9orf3-208ENST00000451893 PRKCZQ05513 592 aa26.17■■□□□ 1.78
C9orf3-208ENST00000451893 RRP1BQ14684 758 aaKnown RBP26.17■■□□□ 1.78
C9orf3-208ENST00000451893 SIRT2Q8IXJ6 389 aa26.17■■□□□ 1.78
C9orf3-208ENST00000451893 COA7Q96BR5 231 aa26.17■■□□□ 1.78
C9orf3-208ENST00000451893 NAV1Q8NEY1 1877 aa26.17■■□□□ 1.78
C9orf3-208ENST00000451893 GCLCP48506 637 aaPredicted RBP26.16■■□□□ 1.78
C9orf3-208ENST00000451893 FEZ1Q99689 392 aa26.16■■□□□ 1.78
C9orf3-208ENST00000451893 LRRCC1Q9C099 1032 aa26.16■■□□□ 1.78
C9orf3-208ENST00000451893 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.16■■□□□ 1.78
C9orf3-208ENST00000451893 BOLA2Q9H3K6 86 aa26.16■■□□□ 1.78
C9orf3-208ENST00000451893 SERPINB13Q9UIV8 391 aa26.16■■□□□ 1.78
C9orf3-208ENST00000451893 ZBTB21Q9ULJ3 1066 aa26.16■■□□□ 1.78
C9orf3-208ENST00000451893 PDE6AP16499 860 aa26.15■■□□□ 1.78
C9orf3-208ENST00000451893 BACE1P56817 501 aa26.15■■□□□ 1.78
C9orf3-208ENST00000451893 WDR18Q9BV38 432 aa26.15■■□□□ 1.78
C9orf3-208ENST00000451893 DNAJC18Q9H819 358 aa26.15■■□□□ 1.78
C9orf3-208ENST00000451893 PAG1Q9NWQ8 432 aa26.15■■□□□ 1.78
C9orf3-208ENST00000451893 ZNF532Q9HCE3 1301 aa26.14■■□□□ 1.78
C9orf3-208ENST00000451893 C19orf81C9J6K1 198 aa26.14■■□□□ 1.78
C9orf3-208ENST00000451893 USP17L10C9JJH3 530 aa26.14■■□□□ 1.78
C9orf3-208ENST00000451893 FAM110CQ1W6H9 321 aa26.14■■□□□ 1.78
C9orf3-208ENST00000451893 SLAIN1Q8ND83 568 aa26.14■■□□□ 1.78
C9orf3-208ENST00000451893 CABP5Q9NP86 173 aa26.14■■□□□ 1.78
C9orf3-208ENST00000451893 TNRC18O15417 2968 aaPredicted RBP26.13■■□□□ 1.77
C9orf3-208ENST00000451893 RAB3GAP1Q15042 981 aa26.13■■□□□ 1.77
C9orf3-208ENST00000451893 SH3D19Q5HYK7 790 aa26.13■■□□□ 1.77
C9orf3-208ENST00000451893 ASCC2Q9H1I8 757 aaPredicted RBP26.13■■□□□ 1.77
C9orf3-208ENST00000451893 GH2P01242 217 aa26.12■■□□□ 1.77
C9orf3-208ENST00000451893 CERKLQ49MI3 558 aaPredicted RBP26.12■■□□□ 1.77
C9orf3-208ENST00000451893 METTL16Q86W50 562 aaKnown RBP26.12■■□□□ 1.77
C9orf3-208ENST00000451893 CCAR1Q8IX12 1150 aaKnown RBP26.12■■□□□ 1.77
C9orf3-208ENST00000451893 EHD4Q9H223 541 aa26.12■■□□□ 1.77
C9orf3-208ENST00000451893 MCM9Q9NXL9 1143 aa26.12■■□□□ 1.77
C9orf3-208ENST00000451893 FLT3LGP49771 235 aa26.11■■□□□ 1.77
C9orf3-208ENST00000451893 AMOTL1Q8IY63 956 aa26.11■■□□□ 1.77
C9orf3-208ENST00000451893 NKX2-3Q8TAU0 364 aa26.11■■□□□ 1.77
C9orf3-208ENST00000451893 DDRGK1Q96HY6 314 aa26.11■■□□□ 1.77
C9orf3-208ENST00000451893 GPATCH3Q96I76 525 aa26.11■■□□□ 1.77
C9orf3-208ENST00000451893 RIOK1Q9BRS2 568 aaKnown RBP26.11■■□□□ 1.77
C9orf3-208ENST00000451893 GABRQQ9UN88 632 aa26.11■■□□□ 1.77
C9orf3-208ENST00000451893 HTTP42858 3142 aa26.11■■□□□ 1.77
C9orf3-208ENST00000451893 ADCY3O60266 1144 aa26.1■■□□□ 1.77
C9orf3-208ENST00000451893 ATP5JP18859 108 aa26.1■■□□□ 1.77
C9orf3-208ENST00000451893 ZYXQ15942 572 aaKnown RBP26.1■■□□□ 1.77
C9orf3-208ENST00000451893 ABCB5Q2M3G0 1257 aa26.1■■□□□ 1.77
C9orf3-208ENST00000451893 B4GALNT3Q6L9W6 998 aa26.1■■□□□ 1.77
C9orf3-208ENST00000451893 EDC3Q96F86 508 aaKnown RBP26.1■■□□□ 1.77
C9orf3-208ENST00000451893 RNF208Q9H0X6 261 aa26.1■■□□□ 1.77
C9orf3-208ENST00000451893 CWC22Q9HCG8 908 aaKnown RBP26.1■■□□□ 1.77
C9orf3-208ENST00000451893 MPHOSPH10O00566 681 aaKnown RBP26.09■■□□□ 1.77
C9orf3-208ENST00000451893 MTFR1Q15390 333 aa26.09■■□□□ 1.77
C9orf3-208ENST00000451893 USP17L2Q6R6M4 530 aa26.09■■□□□ 1.77
C9orf3-208ENST00000451893 MYH7P12883 1935 aa26.09■■□□□ 1.77
C9orf3-208ENST00000451893 SMARCA5O60264 1052 aaPredicted RBP26.08■■□□□ 1.77
C9orf3-208ENST00000451893 SHROOM1Q2M3G4 852 aaPredicted RBP26.08■■□□□ 1.77
C9orf3-208ENST00000451893 ZSCAN25Q6NSZ9 544 aa26.08■■□□□ 1.77
C9orf3-208ENST00000451893 MYH8P13535 1937 aa26.08■■□□□ 1.76
C9orf3-208ENST00000451893 CCL5P13501 91 aa26.07■■□□□ 1.76
C9orf3-208ENST00000451893 USP14P54578 494 aa26.07■■□□□ 1.76
C9orf3-208ENST00000451893 JAG1P78504 1218 aa26.07■■□□□ 1.76
C9orf3-208ENST00000451893 TATDN1Q6P1N9 297 aa26.07■■□□□ 1.76
C9orf3-208ENST00000451893 LCORLQ8N3X6 602 aa26.07■■□□□ 1.76
C9orf3-208ENST00000451893 SDR42E1Q8WUS8 393 aa26.07■■□□□ 1.76
C9orf3-208ENST00000451893 HAUS7Q99871 368 aa26.07■■□□□ 1.76
C9orf3-208ENST00000451893 ARMT1Q9H993 441 aa26.07■■□□□ 1.76
C9orf3-208ENST00000451893 CENPFP49454 3210 aa26.07■■□□□ 1.76
C9orf3-208ENST00000451893 GTF3C2Q8WUA4 911 aaPredicted RBP26.06■■□□□ 1.76
C9orf3-208ENST00000451893 DOCK3Q8IZD9 2030 aa26.05■■□□□ 1.76
C9orf3-208ENST00000451893 MBD4O95243 580 aa26.05■■□□□ 1.76
C9orf3-208ENST00000451893 ELNP15502 786 aa26.05■■□□□ 1.76
C9orf3-208ENST00000451893 HOXA7P31268 230 aaPredicted RBP26.05■■□□□ 1.76
C9orf3-208ENST00000451893 ADD2P35612 726 aa26.05■■□□□ 1.76
C9orf3-208ENST00000451893 PLCD1P51178 756 aa26.05■■□□□ 1.76
C9orf3-208ENST00000451893 PAGR1Q9BTK6 254 aa26.05■■□□□ 1.76
C9orf3-208ENST00000451893 HERVK_113P62684 666 aa26.04■■□□□ 1.76
C9orf3-208ENST00000451893 IRF5Q13568 498 aa26.04■■□□□ 1.76
C9orf3-208ENST00000451893 GPRC5AQ8NFJ5 357 aa26.04■■□□□ 1.76
C9orf3-208ENST00000451893 PXYLP1Q8TE99 480 aa26.04■■□□□ 1.76
C9orf3-208ENST00000451893 P2RX7Q99572 595 aaKnown RBP26.04■■□□□ 1.76
C9orf3-208ENST00000451893 ZBTB47Q9UFB7 747 aaPredicted RBP26.04■■□□□ 1.76
C9orf3-208ENST00000451893 DDX60LQ5H9U9 1706 aaKnown RBP26.03■■□□□ 1.76
C9orf3-208ENST00000451893 TCRBV5S4A2TA0A5A2 114 aa26.03■■□□□ 1.76
C9orf3-208ENST00000451893 INHAP05111 366 aa26.03■■□□□ 1.76
C9orf3-208ENST00000451893 GCC1Q96CN9 775 aa26.03■■□□□ 1.76
C9orf3-208ENST00000451893 DCP1AQ9NPI6 582 aaPredicted RBP26.03■■□□□ 1.76
C9orf3-208ENST00000451893 ECHDC1Q9NTX5 307 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms