RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 EIF3JO75822 258 aaKnown RBP23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 MCAMP43121 646 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 CABP4P57796 275 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 CTDSPL2Q05D32 466 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 LRRC31Q6UY01 552 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 GDAP1L1Q96MZ0 367 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 IDH1O75874 414 aaKnown RBP23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 GYPCP04921 128 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 RASGRP2Q7LDG7 609 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 CABLES1Q8TDN4 633 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 TRIM10Q9UDY6 481 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 FAM205CA6NFA0 338 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 ATF3P18847 181 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 PACS2Q86VP3 889 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 EPSTI1Q96J88 318 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 FAM204AQ9H8W3 233 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 CTAGE15A4D2H0 777 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 CIAO1O76071 339 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 CTAGE8P0CG41 777 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 ERVK-24P63145 666 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 CTAGE6Q86UF2 777 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 CTAGE4Q8IX94 777 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 ADD3Q9UEY8 706 aaKnown RBP23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 TACC3Q9Y6A5 838 aa23.25■■□□□ 1.31
SMARCD2-203ENST00000448276 WDR19Q8NEZ3 1342 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 EIF3CLB5ME19 914 aaKnown RBP23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 MMP1P03956 469 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 IVLP07476 585 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 HSP90B2PQ58FF3 399 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 EIF3CQ99613 913 aaKnown RBP23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 TFR2Q9UP52 801 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 SLC12A7Q9Y666 1083 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 C1orf167Q5SNV9 1468 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 RGPD5Q99666 1765 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 SYNRGQ9UMZ2 1314 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 MEGF6O75095 1541 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 IFIT3O14879 490 aaKnown RBP23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 CSB-PGBD3P0DP91 1061 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 NAPGQ99747 312 aaPredicted RBP23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 SLF1Q9BQI6 1058 aa23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 PIH1D3Q9NQM4 214 aaKnown RBP23.24■■□□□ 1.31
SMARCD2-203ENST00000448276 PBX1P40424 430 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 TAF7LQ5H9L4 462 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 SYNE4Q8N205 404 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 RIN2Q8WYP3 895 aaPredicted RBP23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 CABP5Q9NP86 173 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 ZSWIM5Q9P217 1185 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 POTEB2H3BUK9 544 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 ENC1O14682 589 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 AKAP17AQ02040 695 aaKnown RBP23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 DPYDQ12882 1025 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 SPATA1Q5VX52 437 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 EFCC1Q9HA90 598 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 HDAC6Q9UBN7 1215 aa23.23■■□□□ 1.31
SMARCD2-203ENST00000448276 ADD2P35612 726 aa23.22■■□□□ 1.31
SMARCD2-203ENST00000448276 RRP12Q5JTH9 1297 aaKnown RBP23.22■■□□□ 1.31
SMARCD2-203ENST00000448276 TICAM2Q86XR7 235 aa23.22■■□□□ 1.31
SMARCD2-203ENST00000448276 FAM89AQ96GI7 184 aa23.22■■□□□ 1.31
SMARCD2-203ENST00000448276 ADAMTS7Q9UKP4 1686 aa23.22■■□□□ 1.31
SMARCD2-203ENST00000448276 ZMYND10O75800 440 aa23.22■■□□□ 1.31
SMARCD2-203ENST00000448276 ARHGAP25P42331 645 aa23.22■■□□□ 1.31
SMARCD2-203ENST00000448276 SAFBQ15424 915 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMARCD2-203ENST00000448276 HINFPQ9BQA5 517 aa23.22■■□□□ 1.31
SMARCD2-203ENST00000448276 FMNL1O95466 1100 aaPredicted RBP23.21■■□□□ 1.31
SMARCD2-203ENST00000448276 ERCC5P28715 1186 aaPredicted RBP23.21■■□□□ 1.31
SMARCD2-203ENST00000448276 DCAF5Q96JK2 942 aa23.21■■□□□ 1.31
SMARCD2-203ENST00000448276 VPS16Q9H269 839 aa23.21■■□□□ 1.31
SMARCD2-203ENST00000448276 ZNF532Q9HCE3 1301 aa23.21■■□□□ 1.31
SMARCD2-203ENST00000448276 CUL4BQ13620 913 aa23.21■■□□□ 1.31
SMARCD2-203ENST00000448276 NAA15Q9BXJ9 866 aaKnown RBP23.21■■□□□ 1.31
SMARCD2-203ENST00000448276 TOMM22Q9NS69 142 aa23.21■■□□□ 1.31
SMARCD2-203ENST00000448276 CHRNA2Q15822 529 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 FAM71BQ8TC56 605 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 WWC3Q9ULE0 1092 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 SCN11AQ9UI33 1791 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 ECM29Q5VYK3 1845 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 SRGAP2O75044 1071 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 RNF40O75150 1001 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 ELOA2Q8IYF1 753 aaPredicted RBP23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 TRIML1Q8N9V2 468 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 SPATA20Q8TB22 786 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 GUCA1BQ9UMX6 200 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 CTNND2Q9UQB3 1225 aa23.2■■□□□ 1.3
SMARCD2-203ENST00000448276 DDX60Q8IY21 1712 aaKnown RBP23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 PHRF1Q9P1Y6 1649 aaKnown RBP23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 SLIT3O75094 1523 aa23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 hCG_1642624A0A1W2PR95 340 aa23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 GSPT2Q8IYD1 628 aaKnown RBP23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 MYO6Q9UM54 1294 aa23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 SRPRBQ9Y5M8 271 aaKnown RBP23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 CDKAL1Q5VV42 579 aa23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 TMEM87BQ96K49 555 aa23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 CHP1Q99653 195 aa23.19■■□□□ 1.3
SMARCD2-203ENST00000448276 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.19■■□□□ 1.39e-8■■□□□ 14.4
SMARCD2-203ENST00000448276 PAGE5Q96GU1 130 aa23.18■■□□□ 1.3
SMARCD2-203ENST00000448276 NUP88Q99567 741 aaPredicted RBP23.18■■□□□ 1.3
SMARCD2-203ENST00000448276 WNT7AO00755 349 aa23.18■■□□□ 1.3
SMARCD2-203ENST00000448276 SYF2O95926 243 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms