RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 C11orf96Q7Z7L8 435 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 C14orf80Q86SX3 495 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 CD163Q86VB7 1156 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 SULF2Q8IWU5 870 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 TMEM40Q8WWA1 233 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 GAL3ST3Q96A11 431 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 MTMR8Q96EF0 704 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 NSUN5Q96P11 429 aaKnown RBP4.98□□□□□ -1.61
PMS1-216ENST00000447734 IPO9Q96P70 1041 aaKnown RBP4.98□□□□□ -1.61
PMS1-216ENST00000447734 CDC6Q99741 560 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 TARS2Q9BW92 718 aaKnown RBP4.98□□□□□ -1.61
PMS1-216ENST00000447734 EMILIN2Q9BXX0 1053 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 NUCKS1Q9H1E3 243 aaKnown RBP4.98□□□□□ -1.61
PMS1-216ENST00000447734 RUBCNLQ9H714 662 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 BSDC1Q9NW68 430 aaPredicted RBP4.98□□□□□ -1.61
PMS1-216ENST00000447734 ZFATQ9P243 1243 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 MKL2Q9ULH7 1088 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 DNAJC25-GNG10A0A024R161 153 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 C1QTNF9BB2RNN3 333 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 NFKBIEO00221 500 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 AGRPO00253 132 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 C2CD2LO14523 706 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 AKAP10O43572 662 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 CENPBP07199 599 aaPredicted RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 HOXD8P13378 290 aaPredicted RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 CCNFP41002 786 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 CHRNA4P43681 627 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 SFSWAPQ12872 951 aaKnown RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 PIN1Q13526 163 aaPredicted RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 MLECQ14165 292 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 DHX8Q14562 1220 aaKnown RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 VPS72Q15906 364 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 LONRF3Q496Y0 759 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 KIAA1211LQ6NV74 962 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 SLC4A10Q6U841 1118 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 UNC5AQ6ZN44 842 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 DDX46Q7L014 1031 aaKnown RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 ALYREFQ86V81 257 aaKnown RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 LRRTM3Q86VH5 581 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 TAB3Q8N5C8 712 aaPredicted RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 GRIN3AQ8TCU5 1115 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 IL17RAQ96F46 866 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 EXOC2Q96KP1 924 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 MUC3BQ9H195 1237 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 CLEC4MQ9H2X3 399 aaPredicted RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 PHAXQ9H814 394 aaKnown RBP4.97□□□□□ -1.61
PMS1-216ENST00000447734 TERF2IPQ9NYB0 399 aa4.97□□□□□ -1.61
PMS1-216ENST00000447734 E2F8A0AVK6 867 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 WDHD1O75717 1129 aaPredicted RBP4.96□□□□□ -1.62
PMS1-216ENST00000447734 EYA4O95677 639 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 ARAFP10398 606 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 ARNTP27540 789 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 MAP2K3P46734 347 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 PCDH1Q08174 1060 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 ITKQ08881 620 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 STRN3Q13033 797 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 MTMR1Q13613 665 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 FOXD4L6Q3SYB3 417 aaPredicted RBP4.96□□□□□ -1.62
PMS1-216ENST00000447734 EFHC2Q5JST6 749 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 ZFYVE27Q5T4F4 411 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 FOXB2Q5VYV0 432 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 KSR2Q6VAB6 950 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 FOXD4L3Q6VB84 417 aaPredicted RBP4.96□□□□□ -1.62
PMS1-216ENST00000447734 AHI1Q8N157 1196 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 PPM1KQ8N3J5 372 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 TTC8Q8TAM2 541 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 STK35Q8TDR2 534 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 PNISRQ8TF01 805 aaKnown RBP4.96□□□□□ -1.62
PMS1-216ENST00000447734 LEO1Q8WVC0 666 aaPredicted RBP4.96□□□□□ -1.62
PMS1-216ENST00000447734 KISS1RQ969F8 398 aaPredicted RBP4.96□□□□□ -1.62
PMS1-216ENST00000447734 SLC39A13Q96H72 371 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 DHRS4Q9BTZ2 278 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 AASDHPPTQ9NRN7 309 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 INTS7Q9NVH2 962 aaKnown RBP4.96□□□□□ -1.62
PMS1-216ENST00000447734 SLC5A4Q9NY91 659 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 PCDHB10Q9UN67 800 aa4.96□□□□□ -1.62
PMS1-216ENST00000447734 MRPS23Q9Y3D9 190 aaKnown RBP4.96□□□□□ -1.62
PMS1-216ENST00000447734 CCDC189A1A4V9 331 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 GOLGA6CA6NDK9 693 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 GOLGA6BA6NDN3 693 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 IFRD1O00458 451 aaPredicted RBP4.95□□□□□ -1.62
PMS1-216ENST00000447734 HTR3BO95264 441 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 MAP3K6O95382 1288 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 B3GALT4O96024 378 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 F11P03951 625 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 GOLGA6DP0CG33 693 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 FAM157BP0CG42 384 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 SLC7A5Q01650 507 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 PTPN11Q06124 597 aaPredicted RBP4.95□□□□□ -1.62
PMS1-216ENST00000447734 MAP7Q14244 749 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 MLC1Q15049 377 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 ZRSR2Q15696 482 aaKnown RBP4.95□□□□□ -1.62
PMS1-216ENST00000447734 ZYXQ15942 572 aaKnown RBP4.95□□□□□ -1.62
PMS1-216ENST00000447734 FAM209AQ5JX71 171 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 OVOS1Q6IE37 1185 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 DHX32Q7L7V1 743 aaKnown RBP4.95□□□□□ -1.62
PMS1-216ENST00000447734 STRA8Q7Z7C7 330 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 ZBTB46Q86UZ6 589 aa4.95□□□□□ -1.62
PMS1-216ENST00000447734 WDR66Q8TBY9 1149 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms