RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 VCPKMTQ9H867 229 aa3.25□□□□□ -1.89
CHD9-203ENST00000447540 TIMMDC1Q9NPL8 285 aa3.25□□□□□ -1.89
CHD9-203ENST00000447540 ADAMTS8Q9UP79 889 aa3.25□□□□□ -1.89
CHD9-203ENST00000447540 SUN1O94901 812 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 GNAI3P08754 354 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 TCP1P17987 556 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 EPHB4P54760 987 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 XRCC4Q13426 336 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 SGSM1Q2NKQ1 1148 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 MTHFD1LQ6UB35 978 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 UNC13DQ70J99 1090 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 FRA10AC1Q70Z53 315 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 MYLK4Q86YV6 388 aaPredicted RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 SPDYE1Q8NFV5 336 aaPredicted RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 OR8K1Q8NGG5 319 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 CTNNBL1Q8WYA6 563 aaPredicted RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 FAM81BQ96LP2 452 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 ATG3Q9NT62 314 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 BAIAP2L1Q9UHR4 511 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 SH3GLB1Q9Y371 365 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 RGS12O14924 1447 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 ANO9A1A5B4 782 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 PABPN1LA6NDY0 278 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 TTI1O43156 1089 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 SMARCA1P28370 1054 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 PCYT1AP49585 367 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 MKRN3Q13064 507 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 C16orf87Q6PH81 154 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 PAF1Q8N7H5 531 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 GRAMD1AQ96CP6 724 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 ANO2Q9NQ90 1003 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 SLC3A2P08195 630 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 ANO6Q4KMQ2 910 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 TAOK1Q7L7X3 1001 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 ANKRD44Q8N8A2 993 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 STKLD1Q8NE28 680 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 SH3TC2Q8TF17 1288 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 STMN2Q93045 179 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 FUT8Q9BYC5 575 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 PCDHGA4Q9Y5G9 962 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 FGD5Q6ZNL6 1462 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 C9orf84Q5VXU9 1444 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 ASXL2Q76L83 1435 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 VPS37CA5D8V6 355 aaPredicted RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 CCDC169A6NNP5 214 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 STRNO43815 780 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 POTEJP0CG39 1038 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 PPP2R1AP30153 589 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 SKIV2L2P42285 1042 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 IRGCQ6NXR0 463 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 IQCF2Q8IXL9 164 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 TRIML1Q8N9V2 468 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 GPT2Q8TD30 523 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 TRIM63Q969Q1 353 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 PPP1R12CQ9BZL4 782 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 DYTNA2CJ06 578 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 APAF1O14727 1248 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 BMP15O95972 392 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 UBE3BQ7Z3V4 1068 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 IRGQQ8WZA9 623 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 CARMIL1Q5VZK9 1371 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 IRAK1P51617 712 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 CFAP157Q5JU67 520 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 CDCA5Q96FF9 252 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 DCTPP1Q9H773 170 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 PDE11AQ9HCR9 933 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 L1RE1Q9UN81 338 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 LRCH1Q9Y2L9 728 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 RUSC2Q8N2Y8 1516 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 PPP1R37O75864 691 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 HNRNPCP07910 306 aaKnown RBP eCLIP3.24□□□□□ -1.891e-6■■□□□ 14.2
CHD9-203ENST00000447540 EPB41P11171 864 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 GNGT1P63211 74 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 FAM160A1Q05DH4 1040 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 TUBA3EQ6PEY2 450 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 FGD4Q96M96 766 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 ANKRD2Q9GZV1 360 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 SLC24A3Q9HC58 644 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 MAGI2Q86UL8 1455 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 RBM47A0AV96 593 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 FRMD3A2A2Y4 597 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 TPD52L2O43399 206 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 STAM2O75886 525 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 TBC1D8O95759 1140 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 SKOR1P84550 965 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 STK4Q13043 487 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 RPGRQ92834 1020 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 SKA1Q96BD8 255 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 NUF2Q9BZD4 464 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 BLMHQ13867 455 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 PPP1R21Q6ZMI0 780 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 SCAIQ8N9R8 606 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 TATDN2Q93075 761 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 CAAP1Q9H8G2 361 aa3.24□□□□□ -1.89
CHD9-203ENST00000447540 METTL14Q9HCE5 456 aaKnown RBP3.24□□□□□ -1.89
CHD9-203ENST00000447540 A0A1W2PQ27 194 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 A0A1W2PQ64 194 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 A0A1W2PQD8 194 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 SHOX2O60902 331 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms