RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 TFCP2L1Q9NZI6 479 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 DNAI1Q9UI46 699 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 V9GY48 417 aaPredicted RBP10.82□□□□□ -0.68
KLHL3-202ENST00000447439 COL1A1P02452 1464 aaPredicted RBP10.82□□□□□ -0.68
KLHL3-202ENST00000447439 ECM29Q5VYK3 1845 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 IKBKBO14920 756 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 VEGFAP15692 232 aaPredicted RBP10.82□□□□□ -0.68
KLHL3-202ENST00000447439 SART3Q15020 963 aaKnown RBP10.82□□□□□ -0.68
KLHL3-202ENST00000447439 ERCC6LQ2NKX8 1250 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 FAM47AQ5JRC9 791 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 PTF1AQ7RTS3 328 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 ENAHQ8N8S7 591 aaPredicted RBP10.82□□□□□ -0.68
KLHL3-202ENST00000447439 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.82□□□□□ -0.68
KLHL3-202ENST00000447439 MYH3P11055 1940 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 CYP2D6P10635 497 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 TOP1P11387 765 aaKnown RBP10.81□□□□□ -0.68
KLHL3-202ENST00000447439 FBXO38Q6PIJ6 1188 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 CELF1Q92879 486 aaKnown RBP10.81□□□□□ -0.68
KLHL3-202ENST00000447439 PRDM4Q9UKN5 801 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 MTMR7Q9Y216 660 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 NFE2L3Q9Y4A8 694 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 DEXIO95424 95 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 CDK11BP21127 795 aaKnown RBP10.81□□□□□ -0.68
KLHL3-202ENST00000447439 PTPREP23469 700 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 ZNF174Q15697 407 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 EPC1Q9H2F5 836 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 STK36Q9NRP7 1315 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 SEC23AQ15436 765 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 PKN1Q16512 942 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 VSTM4Q8IW00 320 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 SMAP1Q8IYB5 467 aaPredicted RBP10.81□□□□□ -0.68
KLHL3-202ENST00000447439 ZBTB9Q96C00 473 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 DESI2Q9BSY9 194 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 ST7Q9NRC1 585 aa10.81□□□□□ -0.68
KLHL3-202ENST00000447439 PNPLA7Q6ZV29 1317 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 FAM237AA0A1B0GTK4 181 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 WASF1Q92558 559 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 SMARCE1Q969G3 411 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 RIOK1Q9BRS2 568 aaKnown RBP10.8□□□□□ -0.68
KLHL3-202ENST00000447439 AATFQ9NY61 560 aaKnown RBP eCLIP10.8□□□□□ -0.68
KLHL3-202ENST00000447439 LRP5O75197 1615 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 A0A0U1RQJ8 604 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 USP17L12C9JPN9 530 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 USP17L21D6R901 530 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 ACTN4O43707 911 aaKnown RBP10.8□□□□□ -0.68
KLHL3-202ENST00000447439 SLU7O95391 586 aaKnown RBP10.8□□□□□ -0.68
KLHL3-202ENST00000447439 ADRA2BP18089 450 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 MTF1Q14872 753 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 IFIT1BQ5T764 474 aaKnown RBP10.8□□□□□ -0.68
KLHL3-202ENST00000447439 TOGARAM2Q6ZUX3 1019 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 CPLX3Q8WVH0 158 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 ATRIPQ8WXE1 791 aa10.8□□□□□ -0.68
KLHL3-202ENST00000447439 ZSCAN10Q96SZ4 725 aaPredicted RBP10.8□□□□□ -0.68
KLHL3-202ENST00000447439 ARAP2Q8WZ64 1704 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 TAF1P21675 1872 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 CD44P16070 742 aaKnown RBP10.79□□□□□ -0.68
KLHL3-202ENST00000447439 GNAT2P19087 354 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 GTF2E1P29083 439 aaPredicted RBP10.79□□□□□ -0.68
KLHL3-202ENST00000447439 AKAP17AQ02040 695 aaKnown RBP10.79□□□□□ -0.68
KLHL3-202ENST00000447439 RILPL1Q5EBL4 403 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 ANKRD18AQ8IVF6 992 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 ESR2Q92731 530 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 BLZF1Q9H2G9 400 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 FOXP1Q9H334 677 aaPredicted RBP10.79□□□□□ -0.68
KLHL3-202ENST00000447439 DOT1LQ8TEK3 1739 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 TEX33O43247 280 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 CDC25AP30304 524 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 CREBRFQ8IUR6 639 aa10.79□□□□□ -0.68
KLHL3-202ENST00000447439 SYMPKQ92797 1274 aaKnown RBP10.79□□□□□ -0.68
KLHL3-202ENST00000447439 CGNQ9P2M7 1197 aaKnown RBP10.79□□□□□ -0.68
KLHL3-202ENST00000447439 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
KLHL3-202ENST00000447439 CICQ96RK0 1608 aaPredicted RBP10.79□□□□□ -0.68
KLHL3-202ENST00000447439 VWA3AA6NCI4 1184 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 URI1O94763 535 aaPredicted RBP10.78□□□□□ -0.68
KLHL3-202ENST00000447439 PRDX5P30044 214 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 FAM182BQ5T319 152 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 CTR9Q6PD62 1173 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 TMEM139Q8IV31 216 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 REXO1L1PQ8IX06 675 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 LINC00116Q8NCU8 138 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 RGS22Q8NE09 1264 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 ERO1AQ96HE7 468 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 FAM84BQ96KN1 310 aaPredicted RBP10.78□□□□□ -0.68
KLHL3-202ENST00000447439 RNF41Q9H4P4 317 aaPredicted RBP10.78□□□□□ -0.68
KLHL3-202ENST00000447439 MINPP1Q9UNW1 487 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 LTBP4Q8N2S1 1624 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 MORC3Q14149 939 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 KARSQ15046 597 aaKnown RBP10.78□□□□□ -0.68
KLHL3-202ENST00000447439 PARP10Q53GL7 1025 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 TBC1D9BQ66K14 1250 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 TRIM65Q6PJ69 517 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 TXNRD3Q86VQ6 643 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 IRX2Q9BZI1 471 aaPredicted RBP10.78□□□□□ -0.68
KLHL3-202ENST00000447439 ZNF446Q9NWS9 450 aa10.78□□□□□ -0.68
KLHL3-202ENST00000447439 SRPRBQ9Y5M8 271 aaKnown RBP10.78□□□□□ -0.68
KLHL3-202ENST00000447439 NHSL1Q5SYE7 1610 aa10.77□□□□□ -0.68
KLHL3-202ENST00000447439 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
KLHL3-202ENST00000447439 TRIM75PA6NK02 468 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 CBFA2T2O43439 604 aa10.77□□□□□ -0.69
KLHL3-202ENST00000447439 FUT2Q10981 343 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms