RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 ZNF174Q15697 407 aa16.21■□□□□ 0.19
ERCC3-203ENST00000445889 TRIM22Q8IYM9 498 aa16.21■□□□□ 0.19
ERCC3-203ENST00000445889 RIC1Q4ADV7 1423 aa16.21■□□□□ 0.19
ERCC3-203ENST00000445889 PHRF1Q9P1Y6 1649 aaKnown RBP16.21■□□□□ 0.19
ERCC3-203ENST00000445889 FAM237AA0A1B0GTK4 181 aa16.21■□□□□ 0.18
ERCC3-203ENST00000445889 AKR1B15C9JRZ8 316 aaPredicted RBP16.21■□□□□ 0.18
ERCC3-203ENST00000445889 H3BQF6 201 aa16.21■□□□□ 0.18
ERCC3-203ENST00000445889 ACTN4O43707 911 aaKnown RBP16.21■□□□□ 0.18
ERCC3-203ENST00000445889 CASP14P31944 242 aa16.21■□□□□ 0.18
ERCC3-203ENST00000445889 AKNAD1Q5T1N1 836 aa16.21■□□□□ 0.18
ERCC3-203ENST00000445889 NUTM2AQ8IVF1 878 aaPredicted RBP16.21■□□□□ 0.18
ERCC3-203ENST00000445889 ENOX1Q8TC92 643 aaKnown RBP16.21■□□□□ 0.18
ERCC3-203ENST00000445889 EEF2KMTQ96G04 330 aa16.21■□□□□ 0.18
ERCC3-203ENST00000445889 RNF225M0QZC1 329 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-203ENST00000445889 N4BP1O75113 896 aaKnown RBP16.2■□□□□ 0.18
ERCC3-203ENST00000445889 PHACTR2O75167 634 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 TPM1P09493 284 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 IFNAR1P17181 557 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 SARSP49591 514 aaKnown RBP16.2■□□□□ 0.18
ERCC3-203ENST00000445889 SGMS1Q86VZ5 419 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 VGLL2Q8N8G2 317 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 MLKLQ8NB16 471 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 FUT8Q9BYC5 575 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 TFR2Q9UP52 801 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 LONRF2Q1L5Z9 754 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 RSRC2Q7L4I2 434 aaKnown RBP16.2■□□□□ 0.18
ERCC3-203ENST00000445889 CRACR2BQ8N4Y2 399 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-203ENST00000445889 PIGBQ92521 554 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 HOOK1Q9UJC3 728 aaKnown RBP16.2■□□□□ 0.18
ERCC3-203ENST00000445889 ADAMTS7Q9UKP4 1686 aa16.2■□□□□ 0.18
ERCC3-203ENST00000445889 LMAN1P49257 510 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
ERCC3-203ENST00000445889 DPYDQ12882 1025 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 TTF1Q15361 905 aaPredicted RBP16.19■□□□□ 0.18
ERCC3-203ENST00000445889 SLC4A8Q2Y0W8 1093 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 PPFIBP1Q86W92 1011 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 FCHSD1Q86WN1 690 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 HINFPQ9BQA5 517 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 VPS16Q9H269 839 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 CCDC175P0C221 793 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 EVX2Q03828 476 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 KIF4BQ2VIQ3 1234 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 PNKPQ96T60 521 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 ADGRG1Q9Y653 693 aa16.19■□□□□ 0.18
ERCC3-203ENST00000445889 EVA1CP58658 441 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 CHMP4BP1P59074 171 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 RAD51AP2Q09MP3 1159 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 SKIDA1Q1XH10 827 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 FANCBQ8NB91 859 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 SYMPKQ92797 1274 aaKnown RBP16.18■□□□□ 0.18
ERCC3-203ENST00000445889 GOLGA1Q92805 767 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 V9GY48 417 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-203ENST00000445889 WDR19Q8NEZ3 1342 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 IL2RBP14784 551 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 RILPL1Q5EBL4 403 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
ERCC3-203ENST00000445889 PDE11AQ9HCR9 933 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 TMEM94Q12767 1356 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 LIFRP42702 1097 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
ERCC3-203ENST00000445889 SRPRBQ9Y5M8 271 aaKnown RBP16.18■□□□□ 0.18
ERCC3-203ENST00000445889 BAZ2BQ9UIF8 2168 aaKnown RBP16.17■□□□□ 0.18
ERCC3-203ENST00000445889 ERICH2A1L162 156 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 PLCD1P51178 756 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 APTXQ7Z2E3 356 aaKnown RBP16.17■□□□□ 0.18
ERCC3-203ENST00000445889 ZNF654Q8IZM8 581 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 SLC35F6Q8N357 371 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 TRIM10Q9UDY6 481 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 ADAMTS3O15072 1205 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 PLEKHA8P1O95397 391 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 VEGFAP15692 232 aaPredicted RBP16.17■□□□□ 0.18
ERCC3-203ENST00000445889 TXLNAP40222 546 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 ADGRA1Q86SQ6 560 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 PAGE5Q96GU1 130 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 LRP2BPQ9P2M1 347 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 CTNND2Q9UQB3 1225 aa16.17■□□□□ 0.18
ERCC3-203ENST00000445889 A0A1B0GTH6 734 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 GOLGA6L9A6NEM1 432 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 PES1O00541 588 aaKnown RBP16.16■□□□□ 0.18
ERCC3-203ENST00000445889 RABGGTAQ92696 567 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 ANKZF1Q9H8Y5 726 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 VPS18Q9P253 973 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 ADAM21Q9UKJ8 722 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 TICAM2Q86XR7 235 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 GDAP1L1Q96MZ0 367 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 UBAC1Q9BSL1 405 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 LCMT1Q9UIC8 334 aa16.16■□□□□ 0.18
ERCC3-203ENST00000445889 KIF5CO60282 957 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 DEXIO95424 95 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 NT5DC1Q5TFE4 455 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 SLF1Q9BQI6 1058 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 UBXN6Q9BZV1 441 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 ABCB6Q9NP58 842 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 TAB2Q9NYJ8 693 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms