RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 IRX3P78415 501 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-215ENST00000444609 FAAP100Q0VG06 881 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 SH3BP5LQ7L8J4 393 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 VPS37DQ86XT2 251 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 CNNM1Q9NRU3 951 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 USP40Q9NVE5 1235 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 CHD7Q9P2D1 2997 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 MYH3P11055 1940 aa12.98□□□□□ -0.33
HDAC8-215ENST00000444609 PQBP1O60828 265 aaKnown RBP12.97□□□□□ -0.33
HDAC8-215ENST00000444609 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-215ENST00000444609 HOXC6P09630 235 aa12.97□□□□□ -0.33
HDAC8-215ENST00000444609 PPIGQ13427 754 aaKnown RBP eCLIP12.97□□□□□ -0.33
HDAC8-215ENST00000444609 LRRC41Q15345 812 aa12.97□□□□□ -0.33
HDAC8-215ENST00000444609 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
HDAC8-215ENST00000444609 MFSD5Q6N075 450 aa12.97□□□□□ -0.33
HDAC8-215ENST00000444609 ERMP1Q7Z2K6 904 aa12.97□□□□□ -0.33
HDAC8-215ENST00000444609 ANKS1AQ92625 1134 aa12.97□□□□□ -0.33
HDAC8-215ENST00000444609 ZNF594Q96JF6 807 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-215ENST00000444609 PHF24Q9UPV7 400 aa12.97□□□□□ -0.33
HDAC8-215ENST00000444609 FRMPD3Q5JV73 1810 aa12.97□□□□□ -0.33
HDAC8-215ENST00000444609 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.33
HDAC8-215ENST00000444609 PTPRFP10586 1907 aa12.96□□□□□ -0.33
HDAC8-215ENST00000444609 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-215ENST00000444609 FOXO4P98177 505 aa12.96□□□□□ -0.33
HDAC8-215ENST00000444609 ZNF365Q70YC5 407 aa12.96□□□□□ -0.33
HDAC8-215ENST00000444609 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.33
HDAC8-215ENST00000444609 TOX2Q96NM4 488 aa12.96□□□□□ -0.33
HDAC8-215ENST00000444609 TBC1D2Q9BYX2 928 aa12.96□□□□□ -0.33
HDAC8-215ENST00000444609 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
HDAC8-215ENST00000444609 POTEB3A0JP26 581 aa12.95□□□□□ -0.34
HDAC8-215ENST00000444609 SEPT4O43236 478 aa12.95□□□□□ -0.34
HDAC8-215ENST00000444609 ENTPD3O75355 529 aa12.95□□□□□ -0.34
HDAC8-215ENST00000444609 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
HDAC8-215ENST00000444609 KRT37O76014 449 aa12.95□□□□□ -0.34
HDAC8-215ENST00000444609 SLC5A1P13866 664 aa12.95□□□□□ -0.34
HDAC8-215ENST00000444609 POTEBQ6S5H4 581 aa12.95□□□□□ -0.34
HDAC8-215ENST00000444609 FAM178BQ8IXR5 827 aa12.95□□□□□ -0.34
HDAC8-215ENST00000444609 NPLOC4Q8TAT6 608 aa12.95□□□□□ -0.34
HDAC8-215ENST00000444609 ZNF521Q96K83 1311 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 DDTLA6NHG4 134 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-215ENST00000444609 SLC15A5A6NIM6 579 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 RFXAPO00287 272 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 ELL2O00472 640 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-215ENST00000444609 GFRA3O60609 400 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 PTPREP23469 700 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 RGS3P49796 1198 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 PPP2R2DQ66LE6 453 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 PSRC1Q6PGN9 363 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-215ENST00000444609 ZSCAN29Q8IWY8 852 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-215ENST00000444609 IDI2Q9BXS1 227 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.94□□□□□ -0.34
HDAC8-215ENST00000444609 CWC22Q9HCG8 908 aaKnown RBP12.94□□□□□ -0.34
HDAC8-215ENST00000444609 TBX21Q9UL17 535 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 CHMP3Q9Y3E7 222 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 NDUFB9Q9Y6M9 179 aa12.94□□□□□ -0.34
HDAC8-215ENST00000444609 PHIPQ8WWQ0 1821 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 DCDC2CA8MYV0 355 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 TBC1D12O60347 775 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 ACRP10323 421 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 CSF2RAP15509 400 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 DIXDC1Q155Q3 683 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 CCDC57Q2TAC2 916 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 CAVIN4Q5BKX8 364 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 TAF7LQ5H9L4 462 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 HFE2Q6ZVN8 426 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 PRSS33Q8NF86 280 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 MFSD14AQ96MC6 490 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 PAGR1Q9BTK6 254 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 OSBPL5Q9H0X9 879 aaPredicted RBP12.93□□□□□ -0.34
HDAC8-215ENST00000444609 MBIPQ9NS73 344 aa12.93□□□□□ -0.34
HDAC8-215ENST00000444609 DCXO43602 365 aa12.92□□□□□ -0.34
HDAC8-215ENST00000444609 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
HDAC8-215ENST00000444609 RABGGTBP53611 331 aa12.92□□□□□ -0.34
HDAC8-215ENST00000444609 PTPN5P54829 565 aa12.92□□□□□ -0.34
HDAC8-215ENST00000444609 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
HDAC8-215ENST00000444609 KRT40Q6A162 431 aa12.92□□□□□ -0.34
HDAC8-215ENST00000444609 TMEM199Q8N511 208 aa12.92□□□□□ -0.34
HDAC8-215ENST00000444609 GTF3C2Q8WUA4 911 aaPredicted RBP12.92□□□□□ -0.34
HDAC8-215ENST00000444609 CACNA1GO43497 2377 aa12.92□□□□□ -0.34
HDAC8-215ENST00000444609 PRRC2BQ5JSZ5 2229 aaKnown RBP12.91□□□□□ -0.34
HDAC8-215ENST00000444609 USP17L5A8MUK1 530 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 MYOGP15173 224 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 SSTR3P32745 418 aaPredicted RBP12.91□□□□□ -0.34
HDAC8-215ENST00000444609 GRB14Q14449 540 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 FAM47AQ5JRC9 791 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 CCDC30Q5VVM6 783 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 LMBR1LQ6UX01 489 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 MTIF3Q9H2K0 278 aaKnown RBP12.91□□□□□ -0.34
HDAC8-215ENST00000444609 MYH16Q9H6N6 1097 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 TMOD4Q9NZQ9 345 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 PCDHA11Q9Y5I1 949 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 A0A1B0GUL6 1792 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
HDAC8-215ENST00000444609 A0A1W2PQ45 241 aaPredicted RBP12.9□□□□□ -0.34
HDAC8-215ENST00000444609 A0A1W2PQY0 241 aa12.9□□□□□ -0.34
HDAC8-215ENST00000444609 BACE1P56817 501 aa12.9□□□□□ -0.34
HDAC8-215ENST00000444609 MTMR2Q13614 643 aa12.9□□□□□ -0.34
HDAC8-215ENST00000444609 OLFML2BQ68BL8 750 aa12.9□□□□□ -0.34
HDAC8-215ENST00000444609 WDR18Q9BV38 432 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms