RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, human

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00475-208	ENST00000444476	FBXO33	Q7Z6M2	555 aa		13.63	□□□□□ -0.23
LINC00475-208	ENST00000444476	TDRD7	Q8NHU6	1098 aa	Known RBP	13.63	□□□□□ -0.23
LINC00475-208	ENST00000444476	FAM84B	Q96KN1	310 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC00475-208	ENST00000444476	PGAP2	Q9UHJ9	254 aa		13.63	□□□□□ -0.23
LINC00475-208	ENST00000444476	HDAC9	Q9UKV0	1011 aa		13.63	□□□□□ -0.23
LINC00475-208	ENST00000444476	FAM205A	Q6ZU69	1335 aa		13.63	□□□□□ -0.23
LINC00475-208	ENST00000444476	PNMA6E	A0A0J9YXQ4	647 aa		13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	HMMR	O75330	724 aa		13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	GTF2I	P78347	998 aa		13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	KCNMA1	Q12791	1236 aa		13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	ATP2B3	Q16720	1220 aa		13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	TBC1D22A	Q8WUA7	517 aa		13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	ZBTB40	Q9NUA8	1239 aa		13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	GNL3L	Q9NVN8	582 aa	Known RBP	13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	PGPEP1	Q9NXJ5	209 aa		13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	PA2G4	Q9UQ80	394 aa	Known RBP	13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	COG6	Q9Y2V7	657 aa		13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	ZNF646	O15015	1829 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00475-208	ENST00000444476	TTLL8	A6PVC2	850 aa		13.61	□□□□□ -0.23
LINC00475-208	ENST00000444476	GYG1	P46976	350 aa		13.61	□□□□□ -0.23
LINC00475-208	ENST00000444476	KIF4B	Q2VIQ3	1234 aa		13.61	□□□□□ -0.23
LINC00475-208	ENST00000444476	HSP90AB4P	Q58FF6	505 aa		13.61	□□□□□ -0.23
LINC00475-208	ENST00000444476	CEP85	Q6P2H3	762 aa		13.61	□□□□□ -0.23
LINC00475-208	ENST00000444476	CNTROB	Q8N137	903 aa		13.61	□□□□□ -0.23
LINC00475-208	ENST00000444476	NOP58	Q9Y2X3	529 aa	Known RBP	13.61	□□□□□ -0.23
LINC00475-208	ENST00000444476	FRAT2	O75474	233 aa	Predicted RBP	13.6	□□□□□ -0.23
LINC00475-208	ENST00000444476	PDE4D	Q08499	809 aa		13.6	□□□□□ -0.23
LINC00475-208	ENST00000444476	MYOZ2	Q9NPC6	264 aa		13.6	□□□□□ -0.23
LINC00475-208	ENST00000444476	SUGT1	Q9Y2Z0	365 aa		13.6	□□□□□ -0.23
LINC00475-208	ENST00000444476	PASK	Q96RG2	1323 aa		13.6	□□□□□ -0.23
LINC00475-208	ENST00000444476	RRP1	P56182	461 aa	Known RBP	13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	OS9	Q13438	667 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	CDC37L1	Q7L3B6	337 aa		13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	ERC1	Q8IUD2	1116 aa		13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	TRPM4	Q8TD43	1214 aa		13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	C1orf115	Q9H7X2	142 aa		13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	GPR108	Q9NPR9	543 aa		13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	CDV3	Q9UKY7	258 aa	Known RBP	13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	PITPNM2	Q9BZ72	1349 aa		13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	ARAP2	Q8WZ64	1704 aa		13.59	□□□□□ -0.23
LINC00475-208	ENST00000444476	SURF6	O75683	361 aa	Known RBP	13.58	□□□□□ -0.24
LINC00475-208	ENST00000444476	CLK2	P49760	499 aa	Known RBP	13.58	□□□□□ -0.24
LINC00475-208	ENST00000444476	HIRA	P54198	1017 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC00475-208	ENST00000444476	MFSD14B	Q5SR56	506 aa		13.58	□□□□□ -0.24
LINC00475-208	ENST00000444476	MAP1S	Q66K74	1059 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC00475-208	ENST00000444476	WDR66	Q8TBY9	1149 aa		13.58	□□□□□ -0.24
LINC00475-208	ENST00000444476	DCPS	Q96C86	337 aa	Known RBP	13.58	□□□□□ -0.24
LINC00475-208	ENST00000444476	MAST3	O60307	1309 aa		13.58	□□□□□ -0.24
LINC00475-208	ENST00000444476	PDS5A	Q29RF7	1337 aa	Known RBP	13.58	□□□□□ -0.24
LINC00475-208	ENST00000444476	MYH13	Q9UKX3	1938 aa		13.57	□□□□□ -0.24
LINC00475-208	ENST00000444476		A0A1B0GUL7	405 aa		13.57	□□□□□ -0.24
LINC00475-208	ENST00000444476	SHTN1	A0MZ66	631 aa		13.57	□□□□□ -0.24
LINC00475-208	ENST00000444476	TFCP2	Q12800	502 aa		13.57	□□□□□ -0.24
LINC00475-208	ENST00000444476	KIAA0825	Q8IV33	1275 aa		13.57	□□□□□ -0.24
LINC00475-208	ENST00000444476	MTMR14	Q8NCE2	650 aa		13.57	□□□□□ -0.24
LINC00475-208	ENST00000444476	DENND2A	Q9ULE3	1009 aa		13.57	□□□□□ -0.24
LINC00475-208	ENST00000444476	RNF225	M0QZC1	329 aa	Predicted RBP	13.56	□□□□□ -0.24
LINC00475-208	ENST00000444476	HDLBP	Q00341	1268 aa	Known RBP	13.56	□□□□□ -0.24
LINC00475-208	ENST00000444476	AAMP	Q13685	434 aa		13.56	□□□□□ -0.24
LINC00475-208	ENST00000444476	ZGPAT	Q8N5A5	531 aa	Known RBP	13.56	□□□□□ -0.24
LINC00475-208	ENST00000444476	CERS5	Q8N5B7	392 aa		13.56	□□□□□ -0.24
LINC00475-208	ENST00000444476	TRPM7	Q96QT4	1865 aa		13.56	□□□□□ -0.24
LINC00475-208	ENST00000444476	TMEM88B	A6NKF7	163 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	MYO1B	O43795	1136 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	PTS	Q03393	145 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	DHX9	Q08211	1270 aa	Known RBP	13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	DLGAP5	Q15398	846 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	GORAB	Q5T7V8	394 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	C20orf194	Q5TEA3	1177 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	CCDC102B	Q68D86	513 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	KRT26	Q7Z3Y9	468 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	XAGE2	Q96GT9	111 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	MXD3	Q9BW11	206 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	MRI	Q9BWK5	157 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	GGA3	Q9NZ52	723 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	SERPINA10	Q9UK55	444 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	SALL1	Q9NSC2	1324 aa		13.55	□□□□□ -0.24
LINC00475-208	ENST00000444476	WNT10B	O00744	389 aa		13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	IGSF3	O75054	1194 aa		13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	EGFR	P00533	1210 aa		13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	TIMM10	P62072	90 aa		13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	CHAF1A	Q13111	956 aa	Predicted RBP	13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	TNNI3K	Q59H18	835 aa		13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	PDXDC2P	Q6P474	469 aa		13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476		Q6ZVU0	165 aa		13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	ZBED3	Q96IU2	234 aa	Predicted RBP	13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	NEUROD6	Q96NK8	337 aa		13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	TTF2	Q9UNY4	1162 aa	Known RBP	13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	FPGT-TNNI3K	V9GXZ4	949 aa		13.54	□□□□□ -0.24
LINC00475-208	ENST00000444476	CEP350	Q5VT06	3117 aa		13.53	□□□□□ -0.24
LINC00475-208	ENST00000444476	POLR2A	P24928	1970 aa	Known RBP	13.53	□□□□□ -0.24
LINC00475-208	ENST00000444476	RAB11FIP3	O75154	756 aa		13.53	□□□□□ -0.24
LINC00475-208	ENST00000444476	UQCRFS1P1	P0C7P4	283 aa		13.53	□□□□□ -0.24
LINC00475-208	ENST00000444476	PHKA1	P46020	1223 aa		13.53	□□□□□ -0.24
LINC00475-208	ENST00000444476	NANOS1	Q8WY41	292 aa	Known RBP	13.53	□□□□□ -0.24
LINC00475-208	ENST00000444476	KIF1BP	Q96EK5	621 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms