RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 GCKRQ14397 625 aa18.11■□□□□ 0.49
SYNCRIP-203ENST00000444272 Q3C1V9 767 aa18.11■□□□□ 0.49
SYNCRIP-203ENST00000444272 TMEM240Q5SV17 173 aa18.11■□□□□ 0.49
SYNCRIP-203ENST00000444272 LDHAL6AQ6ZMR3 332 aa18.11■□□□□ 0.49
SYNCRIP-203ENST00000444272 ERVK-9P63128 1117 aa18.1■□□□□ 0.49
SYNCRIP-203ENST00000444272 ERVK-24P63145 666 aa18.1■□□□□ 0.49
SYNCRIP-203ENST00000444272 NEUROD2Q15784 382 aa18.1■□□□□ 0.49
SYNCRIP-203ENST00000444272 C16orf59Q7L2K0 433 aa18.1■□□□□ 0.49
SYNCRIP-203ENST00000444272 SLC44A5Q8NCS7 719 aa18.1■□□□□ 0.49
SYNCRIP-203ENST00000444272 ANKS1AQ92625 1134 aa18.1■□□□□ 0.49
SYNCRIP-203ENST00000444272 HLA-CQ95604 372 aa18.1■□□□□ 0.49
SYNCRIP-203ENST00000444272 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 CYBAP13498 195 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 ALADP13716 330 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 HERVK_113P62684 666 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 ATP2B2Q01814 1243 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 ZSCAN29Q8IWY8 852 aaPredicted RBP18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 ZNF280CQ8ND82 737 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 RBPJLQ9UBG7 517 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 SUGT1Q9Y2Z0 365 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 MTCH2Q9Y6C9 303 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 NDUFB9Q9Y6M9 179 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 ZFHX4Q86UP3 3567 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 ATAD5Q96QE3 1844 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 CACNA1GO43497 2377 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 CACNA1BQ00975 2339 aa18.09■□□□□ 0.49
SYNCRIP-203ENST00000444272 MAP3K10Q02779 954 aa18.08■□□□□ 0.48
SYNCRIP-203ENST00000444272 LRRC41Q15345 812 aa18.08■□□□□ 0.48
SYNCRIP-203ENST00000444272 TAF7LQ5H9L4 462 aa18.08■□□□□ 0.48
SYNCRIP-203ENST00000444272 PPP2R2DQ66LE6 453 aa18.08■□□□□ 0.48
SYNCRIP-203ENST00000444272 CCDC174Q6PII3 467 aa18.08■□□□□ 0.48
SYNCRIP-203ENST00000444272 FBXO33Q7Z6M2 555 aa18.08■□□□□ 0.48
SYNCRIP-203ENST00000444272 PAGR1Q9BTK6 254 aa18.08■□□□□ 0.48
SYNCRIP-203ENST00000444272 USP40Q9NVE5 1235 aa18.08■□□□□ 0.48
SYNCRIP-203ENST00000444272 MYO15AQ9UKN7 3530 aa18.07■□□□□ 0.48
SYNCRIP-203ENST00000444272 GTPBP6O43824 516 aaPredicted RBP18.07■□□□□ 0.48
SYNCRIP-203ENST00000444272 RGS3P49796 1198 aa18.07■□□□□ 0.48
SYNCRIP-203ENST00000444272 PPIGQ13427 754 aaKnown RBP eCLIP18.07■□□□□ 0.484e-19■□□□□ 9.7
SYNCRIP-203ENST00000444272 DIXDC1Q155Q3 683 aa18.07■□□□□ 0.48
SYNCRIP-203ENST00000444272 SH3BP5LQ7L8J4 393 aa18.07■□□□□ 0.48
SYNCRIP-203ENST00000444272 GJD3Q8N144 294 aa18.07■□□□□ 0.48
SYNCRIP-203ENST00000444272 RFXAPO00287 272 aa18.06■□□□□ 0.48
SYNCRIP-203ENST00000444272 TIMP1P01033 207 aa18.06■□□□□ 0.48
SYNCRIP-203ENST00000444272 ACRP10323 421 aa18.06■□□□□ 0.48
SYNCRIP-203ENST00000444272 FAAP100Q0VG06 881 aa18.06■□□□□ 0.48
SYNCRIP-203ENST00000444272 SSTR3P32745 418 aaPredicted RBP18.05■□□□□ 0.48
SYNCRIP-203ENST00000444272 SH3D19Q5HYK7 790 aa18.05■□□□□ 0.48
SYNCRIP-203ENST00000444272 KRT40Q6A162 431 aa18.05■□□□□ 0.48
SYNCRIP-203ENST00000444272 MFSD5Q6N075 450 aa18.05■□□□□ 0.48
SYNCRIP-203ENST00000444272 ZNF365Q70YC5 407 aa18.05■□□□□ 0.48
SYNCRIP-203ENST00000444272 NPLOC4Q8TAT6 608 aa18.05■□□□□ 0.48
SYNCRIP-203ENST00000444272 MBIPQ9NS73 344 aa18.05■□□□□ 0.48
SYNCRIP-203ENST00000444272 TRIOO75962 3097 aa18.04■□□□□ 0.48
SYNCRIP-203ENST00000444272 DDTLA6NHG4 134 aaPredicted RBP18.04■□□□□ 0.48
SYNCRIP-203ENST00000444272 GFRA3O60609 400 aa18.04■□□□□ 0.48
SYNCRIP-203ENST00000444272 KRT37O76014 449 aa18.04■□□□□ 0.48
SYNCRIP-203ENST00000444272 FOXO4P98177 505 aa18.04■□□□□ 0.48
SYNCRIP-203ENST00000444272 WDR78Q5VTH9 848 aa18.04■□□□□ 0.48
SYNCRIP-203ENST00000444272 PSRC1Q6PGN9 363 aaPredicted RBP18.04■□□□□ 0.48
SYNCRIP-203ENST00000444272 PHF24Q9UPV7 400 aa18.04■□□□□ 0.48
SYNCRIP-203ENST00000444272 ZFHX2Q9C0A1 2572 aaPredicted RBP18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 SEPT4O43236 478 aa18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 ENTPD3O75355 529 aa18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 GLRX3O76003 335 aaKnown RBP18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 CSF2RAP15509 400 aa18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 POU3F3P20264 500 aaPredicted RBP18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 HOXA7P31268 230 aaPredicted RBP18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 RABGGTBP53611 331 aa18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 CCDC57Q2TAC2 916 aa18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 CAVIN4Q5BKX8 364 aa18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 MYH13Q9UKX3 1938 aa18.03■□□□□ 0.48
SYNCRIP-203ENST00000444272 ZNF521Q96K83 1311 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 FAM196BA6NMK8 535 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 APBB1O00213 710 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 MYOGP15173 224 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 NCBP3Q53F19 620 aaKnown RBP18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 FAM47AQ5JRC9 791 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 HFE2Q6ZVN8 426 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 FAM178BQ8IXR5 827 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 PRSS33Q8NF86 280 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 TBC1D2Q9BYX2 928 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 TRIM35Q9UPQ4 493 aa18.02■□□□□ 0.48
SYNCRIP-203ENST00000444272 SLC15A5A6NIM6 579 aa18.01■□□□□ 0.47
SYNCRIP-203ENST00000444272 DCDC2CA8MYV0 355 aa18.01■□□□□ 0.47
SYNCRIP-203ENST00000444272 HOXC6P09630 235 aa18.01■□□□□ 0.47
SYNCRIP-203ENST00000444272 PTPREP23469 700 aa18.01■□□□□ 0.47
SYNCRIP-203ENST00000444272 MTMR2Q13614 643 aa18.01■□□□□ 0.47
SYNCRIP-203ENST00000444272 ERMP1Q7Z2K6 904 aa18.01■□□□□ 0.47
SYNCRIP-203ENST00000444272 MYH16Q9H6N6 1097 aa18.01■□□□□ 0.47
SYNCRIP-203ENST00000444272 A0A1W2PQ45 241 aaPredicted RBP18■□□□□ 0.47
SYNCRIP-203ENST00000444272 A0A1W2PQY0 241 aa18■□□□□ 0.47
SYNCRIP-203ENST00000444272 DCXO43602 365 aa18■□□□□ 0.47
SYNCRIP-203ENST00000444272 LMBR1LQ6UX01 489 aa18■□□□□ 0.47
SYNCRIP-203ENST00000444272 ANKRD33Q7Z3H0 272 aa18■□□□□ 0.47
SYNCRIP-203ENST00000444272 IDI2Q9BXS1 227 aa18■□□□□ 0.47
SYNCRIP-203ENST00000444272 OSBPL5Q9H0X9 879 aaPredicted RBP18■□□□□ 0.47
SYNCRIP-203ENST00000444272 TMOD4Q9NZQ9 345 aa18■□□□□ 0.47
SYNCRIP-203ENST00000444272 TBX21Q9UL17 535 aa18■□□□□ 0.47
SYNCRIP-203ENST00000444272 BRWD1Q9NSI6 2320 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms