RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 NOSTRINQ8IVI9 506 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 CARMIL3Q8ND23 1372 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 KCNV1Q6PIU1 500 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 EGFL6Q8IUX8 553 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 SERTAD1Q9UHV2 236 aa5.62□□□□□ -1.51
HERC1-201ENST00000443617 TTC37Q6PGP7 1564 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 YTHDC2Q9H6S0 1430 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 ZBTB43O43298 467 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 SYF2O95926 243 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 BMP15O95972 392 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 CFAP221Q4G0U5 840 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 SHC4Q6S5L8 630 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 CLTAP09496 248 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 METTL16Q86W50 562 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 IFIH1Q9BYX4 1025 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 VCPKMTQ9H867 229 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 PAG1Q9NWQ8 432 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 TUBE1Q9UJT0 475 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 ENO4A6NNW6 628 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 TRIM21P19474 475 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 CCNHP51946 323 aaPredicted RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 NLRP6P59044 892 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 GPHNQ9NQX3 736 aaPredicted RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 RMND1Q9NWS8 449 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 MRPL12P52815 198 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 MYO1EQ12965 1108 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 VPS37DQ86XT2 251 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 MMS19Q96T76 1030 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 SNRKQ9NRH2 765 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 IARSP41252 1262 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 NBPF6Q5VWK0 638 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 RIN2Q8WYP3 895 aaPredicted RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 LRRC45Q96CN5 670 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 NBPF4Q96M43 638 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 RNF217Q8TC41 542 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 PYM1Q9BRP8 204 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 GOLGA8AA7E2F4 631 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 HMGB1P1B2RPK0 211 aaPredicted RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 SEMA3EO15041 775 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 AKR1B10O60218 316 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 TMEM139Q8IV31 216 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 BAIAP2L1Q9UHR4 511 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 PTGISQ16647 500 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 USPL1Q5W0Q7 1092 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 DYDC1Q8WWB3 177 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 SAAL1Q96ER3 474 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 PAGE5Q96GU1 130 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 PPANQ9NQ55 473 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 IRAK4Q9NWZ3 460 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 E7EWF7 191 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 KIF5BP33176 963 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 TRAF1Q13077 416 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 NAA35Q5VZE5 725 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 TNNI3KQ59H18 835 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 TMEM67Q5HYA8 995 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 RUFY4Q6ZNE9 571 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 CCDC197Q8NCU1 140 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 CEP126Q9P2H0 1117 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 FPGT-TNNI3KV9GXZ4 949 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 SYCP2Q9BX26 1530 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 GMNCA6NCL1 334 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 COBLO75128 1261 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 COPB1P53618 953 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 CCDC38Q502W7 563 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 PPP4R3AQ6IN85 833 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 ARL8AQ96BM9 186 aa5.61□□□□□ -1.51
HERC1-201ENST00000443617 CCDC43Q96MW1 224 aaKnown RBP5.61□□□□□ -1.51
HERC1-201ENST00000443617 XBP1P17861 261 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 LACTBP83111 547 aaPredicted RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 TCP11Q8WWU5 503 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 IFT74Q96LB3 600 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 PAIP2Q9BPZ3 127 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 EHD4Q9H223 541 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 PPP6R2O75170 966 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 HOXB7P09629 217 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 TRHP20396 242 aaPredicted RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 ZRSR2Q15696 482 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 YTHDF3Q7Z739 585 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 FAM114A1Q8IWE2 563 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 AENQ8WTP8 325 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 EYA1Q99502 592 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 ATXN2Q99700 1313 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 CDC27P30260 824 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 PLPPR3Q6T4P5 718 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 TRIM58Q8NG06 486 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 MICAL1Q8TDZ2 1067 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 KCNG1Q9UIX4 513 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 RPSAP08865 295 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 FNBP4Q8N3X1 1017 aaPredicted RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 WHAMMQ8TF30 809 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 FAM210AQ96ND0 272 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 TLR7Q9NYK1 1049 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 NDUFA10O95299 355 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 ATP1A1P05023 1023 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 RNASE9P60153 205 aaKnown RBP5.6□□□□□ -1.51
HERC1-201ENST00000443617 MMGT1Q8N4V1 131 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 KLHDC4Q8TBB5 520 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 NDUFB9Q9Y6M9 179 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 SLC7A5Q01650 507 aa5.6□□□□□ -1.51
HERC1-201ENST00000443617 SPAG5Q96R06 1193 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms