RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 CT47B1P0C2W7 299 aaPredicted RBP25.56■■□□□ 1.68
POLR2J3-202ENST00000443430 COL6A1P12109 1028 aa25.56■■□□□ 1.68
POLR2J3-202ENST00000443430 USP6NLQ92738 828 aa25.56■■□□□ 1.68
POLR2J3-202ENST00000443430 DNAJC18Q9H819 358 aa25.56■■□□□ 1.68
POLR2J3-202ENST00000443430 LRP2BPQ9P2M1 347 aa25.56■■□□□ 1.68
POLR2J3-202ENST00000443430 RBPJLQ9UBG7 517 aa25.56■■□□□ 1.68
POLR2J3-202ENST00000443430 C19orf81C9J6K1 198 aa25.55■■□□□ 1.68
POLR2J3-202ENST00000443430 GNAI3P08754 354 aa25.55■■□□□ 1.68
POLR2J3-202ENST00000443430 CACNB2Q08289 660 aaPredicted RBP25.55■■□□□ 1.68
POLR2J3-202ENST00000443430 Q3C1V9 767 aa25.55■■□□□ 1.68
POLR2J3-202ENST00000443430 CDK5RAP2Q96SN8 1893 aa25.54■■□□□ 1.68
POLR2J3-202ENST00000443430 MAPK4P31152 587 aa25.54■■□□□ 1.68
POLR2J3-202ENST00000443430 SHROOM1Q2M3G4 852 aaPredicted RBP25.54■■□□□ 1.68
POLR2J3-202ENST00000443430 LHX8Q68G74 356 aa25.54■■□□□ 1.68
POLR2J3-202ENST00000443430 METTL16Q86W50 562 aaKnown RBP25.54■■□□□ 1.68
POLR2J3-202ENST00000443430 TRMT44Q8IYL2 757 aaKnown RBP25.54■■□□□ 1.68
POLR2J3-202ENST00000443430 AATFQ9NY61 560 aaKnown RBP eCLIP25.54■■□□□ 1.68
POLR2J3-202ENST00000443430 ZKSCAN1P17029 563 aaPredicted RBP25.53■■□□□ 1.68
POLR2J3-202ENST00000443430 PDE3AQ14432 1141 aa25.53■■□□□ 1.68
POLR2J3-202ENST00000443430 POTEEQ6S8J3 1075 aa25.53■■□□□ 1.68
POLR2J3-202ENST00000443430 FOXP4Q8IVH2 680 aaPredicted RBP25.53■■□□□ 1.68
POLR2J3-202ENST00000443430 TGFBRAP1Q8WUH2 860 aa25.53■■□□□ 1.68
POLR2J3-202ENST00000443430 NOL10Q9BSC4 688 aaKnown RBP25.53■■□□□ 1.68
POLR2J3-202ENST00000443430 PORCNQ9H237 461 aa25.53■■□□□ 1.68
POLR2J3-202ENST00000443430 USP17L10C9JJH3 530 aa25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 BAG3O95817 575 aa25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 CCND3P30281 292 aaPredicted RBP25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 PPP4CP60510 307 aa25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 ERVK-9P63128 1117 aa25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 ERVK-24P63145 666 aa25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 CCL14Q16627 93 aa25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 LRRC26Q2I0M4 334 aa25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 MORN1Q5T089 497 aa25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 MAPKAPK5Q8IW41 473 aa25.52■■□□□ 1.68
POLR2J3-202ENST00000443430 GDF11O95390 407 aa25.51■■□□□ 1.67
POLR2J3-202ENST00000443430 UQCRFS1P1P0C7P4 283 aa25.51■■□□□ 1.67
POLR2J3-202ENST00000443430 NAA16Q6N069 864 aaPredicted RBP25.51■■□□□ 1.67
POLR2J3-202ENST00000443430 GPR142Q7Z601 462 aa25.51■■□□□ 1.67
POLR2J3-202ENST00000443430 GINM1Q9NU53 330 aa25.51■■□□□ 1.67
POLR2J3-202ENST00000443430 FOCADQ5VW36 1801 aa25.51■■□□□ 1.67
POLR2J3-202ENST00000443430 PLCG2P16885 1265 aa25.5■■□□□ 1.67
POLR2J3-202ENST00000443430 FLT1P17948 1338 aa25.5■■□□□ 1.67
POLR2J3-202ENST00000443430 RGS2P41220 211 aa25.5■■□□□ 1.67
POLR2J3-202ENST00000443430 ADGRA1Q86SQ6 560 aa25.5■■□□□ 1.67
POLR2J3-202ENST00000443430 ARHGAP45Q92619 1136 aa25.5■■□□□ 1.67
POLR2J3-202ENST00000443430 EMILIN3Q9NT22 766 aa25.5■■□□□ 1.67
POLR2J3-202ENST00000443430 PALD1Q9ULE6 856 aa25.5■■□□□ 1.67
POLR2J3-202ENST00000443430 ZBTB21Q9ULJ3 1066 aa25.5■■□□□ 1.67
POLR2J3-202ENST00000443430 MDM2Q00987 491 aaPredicted RBP25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 G3BP1Q13283 466 aaKnown RBP eCLIP25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 PLEKHH3Q7Z736 793 aa25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 CCAR1Q8IX12 1150 aaKnown RBP25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 CRACR2BQ8N4Y2 399 aaPredicted RBP25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 GTF3C2Q8WUA4 911 aaPredicted RBP25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 PAGR1Q9BTK6 254 aa25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 SNRKQ9NRH2 765 aa25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 DNAH12Q6ZR08 3092 aa25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 MYO5AQ9Y4I1 1855 aaKnown RBP25.49■■□□□ 1.67
POLR2J3-202ENST00000443430 UNC80Q8N2C7 3258 aa25.48■■□□□ 1.67
POLR2J3-202ENST00000443430 RARSP54136 660 aaKnown RBP25.48■■□□□ 1.67
POLR2J3-202ENST00000443430 APBA2Q99767 749 aa25.48■■□□□ 1.67
POLR2J3-202ENST00000443430 MAST2Q6P0Q8 1798 aa25.48■■□□□ 1.67
POLR2J3-202ENST00000443430 FRMPD3Q5JV73 1810 aa25.47■■□□□ 1.67
POLR2J3-202ENST00000443430 PNMA6EA0A0J9YXQ4 647 aa25.47■■□□□ 1.67
POLR2J3-202ENST00000443430 TRIM34Q9BYJ4 488 aa25.47■■□□□ 1.67
POLR2J3-202ENST00000443430 MAP2K5Q13163 448 aa25.46■■□□□ 1.67
POLR2J3-202ENST00000443430 USP17L2Q6R6M4 530 aa25.46■■□□□ 1.67
POLR2J3-202ENST00000443430 LAMA2P24043 3122 aaKnown RBP25.46■■□□□ 1.67
POLR2J3-202ENST00000443430 GNAI2P04899 355 aa25.45■■□□□ 1.66
POLR2J3-202ENST00000443430 SAP30BPQ9UHR5 308 aaKnown RBP25.45■■□□□ 1.66
POLR2J3-202ENST00000443430 POTEB2H3BUK9 544 aa25.44■■□□□ 1.66
POLR2J3-202ENST00000443430 CNMDO75829 334 aa25.44■■□□□ 1.66
POLR2J3-202ENST00000443430 CYP2E1P05181 493 aaPredicted RBP25.44■■□□□ 1.66
POLR2J3-202ENST00000443430 TTC39AQ5SRH9 613 aa25.44■■□□□ 1.66
POLR2J3-202ENST00000443430 EDC3Q96F86 508 aaKnown RBP25.44■■□□□ 1.66
POLR2J3-202ENST00000443430 RABGAP1Q9Y3P9 1069 aa25.44■■□□□ 1.66
POLR2J3-202ENST00000443430 C12orf42Q96LP6 360 aa25.43■■□□□ 1.66
POLR2J3-202ENST00000443430 FLRT1Q9NZU1 646 aa25.43■■□□□ 1.66
POLR2J3-202ENST00000443430 GH2P01242 217 aa25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 HLA-DOAP06340 250 aa25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 TNNI3KQ59H18 835 aa25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 CCDC158Q5M9N0 1113 aa25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 FAM109BQ6ICB4 259 aaPredicted RBP25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 DBNDD2Q9BQY9 259 aa25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 COL25A1Q9BXS0 654 aaPredicted RBP25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 SENP6Q9GZR1 1112 aaPredicted RBP25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 CWC22Q9HCG8 908 aaKnown RBP25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 GPR108Q9NPR9 543 aa25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 NDUFB9Q9Y6M9 179 aa25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 FPGT-TNNI3KV9GXZ4 949 aa25.42■■□□□ 1.66
POLR2J3-202ENST00000443430 MYH1P12882 1939 aa25.41■■□□□ 1.66
POLR2J3-202ENST00000443430 USP17L15C9J2P7 530 aa25.41■■□□□ 1.66
POLR2J3-202ENST00000443430 USP17L13C9JLJ4 530 aa25.41■■□□□ 1.66
POLR2J3-202ENST00000443430 USP17L11C9JVI0 530 aa25.41■■□□□ 1.66
POLR2J3-202ENST00000443430 USP17L18D6R9N7 530 aa25.41■■□□□ 1.66
POLR2J3-202ENST00000443430 USP17L22D6RA61 530 aa25.41■■□□□ 1.66
POLR2J3-202ENST00000443430 USP17L17D6RBQ6 530 aa25.41■■□□□ 1.66
POLR2J3-202ENST00000443430 USP17L19D6RCP7 530 aa25.41■■□□□ 1.66
POLR2J3-202ENST00000443430 USP17L20D6RJB6 530 aa25.41■■□□□ 1.66
POLR2J3-202ENST00000443430 DYNLL1P63167 89 aaKnown RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms