RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 MX1P20591 662 aa25.38■■□□□ 1.65
CDKN3-204ENST00000442975 KBTBD3Q8NAB2 608 aa25.38■■□□□ 1.65
CDKN3-204ENST00000442975 PTPN22Q9Y2R2 807 aa25.38■■□□□ 1.65
CDKN3-204ENST00000442975 SLC45A1Q9Y2W3 748 aa25.38■■□□□ 1.65
CDKN3-204ENST00000442975 CYP2D6P10635 497 aa25.37■■□□□ 1.65
CDKN3-204ENST00000442975 EVX2Q03828 476 aa25.37■■□□□ 1.65
CDKN3-204ENST00000442975 PROCA1Q8NCQ7 364 aaPredicted RBP25.37■■□□□ 1.65
CDKN3-204ENST00000442975 EXOC6Q8TAG9 804 aa25.37■■□□□ 1.65
CDKN3-204ENST00000442975 GCC1Q96CN9 775 aa25.37■■□□□ 1.65
CDKN3-204ENST00000442975 WDR18Q9BV38 432 aa25.37■■□□□ 1.65
CDKN3-204ENST00000442975 GINM1Q9NU53 330 aa25.37■■□□□ 1.65
CDKN3-204ENST00000442975 HTTP42858 3142 aa25.37■■□□□ 1.65
CDKN3-204ENST00000442975 DDX60LQ5H9U9 1706 aaKnown RBP25.37■■□□□ 1.65
CDKN3-204ENST00000442975 GLRX3O76003 335 aaKnown RBP25.36■■□□□ 1.65
CDKN3-204ENST00000442975 AAMPQ13685 434 aa25.36■■□□□ 1.65
CDKN3-204ENST00000442975 CERKLQ49MI3 558 aaPredicted RBP25.36■■□□□ 1.65
CDKN3-204ENST00000442975 DDRGK1Q96HY6 314 aa25.36■■□□□ 1.65
CDKN3-204ENST00000442975 PUS7LQ9H0K6 701 aaKnown RBP25.36■■□□□ 1.65
CDKN3-204ENST00000442975 TMOD4Q9NZQ9 345 aa25.36■■□□□ 1.65
CDKN3-204ENST00000442975 PNMA3Q9UL41 463 aa25.36■■□□□ 1.65
CDKN3-204ENST00000442975 SUPT16HQ9Y5B9 1047 aaKnown RBP25.36■■□□□ 1.65
CDKN3-204ENST00000442975 SLC4A4Q9Y6R1 1079 aa25.36■■□□□ 1.65
CDKN3-204ENST00000442975 NAV1Q8NEY1 1877 aa25.36■■□□□ 1.65
CDKN3-204ENST00000442975 SHMT1P34896 483 aa25.35■■□□□ 1.65
CDKN3-204ENST00000442975 RAB3GAP1Q15042 981 aa25.35■■□□□ 1.65
CDKN3-204ENST00000442975 TATDN1Q6P1N9 297 aa25.35■■□□□ 1.65
CDKN3-204ENST00000442975 PI4K2BQ8TCG2 481 aa25.35■■□□□ 1.65
CDKN3-204ENST00000442975 FEZ1Q99689 392 aa25.35■■□□□ 1.65
CDKN3-204ENST00000442975 BACE1P56817 501 aa25.34■■□□□ 1.65
CDKN3-204ENST00000442975 PABPC4Q13310 644 aaKnown RBP eCLIP25.34■■□□□ 1.654e-9■■■■□ 25.4
CDKN3-204ENST00000442975 ABCB5Q2M3G0 1257 aa25.34■■□□□ 1.65
CDKN3-204ENST00000442975 AMOTL1Q8IY63 956 aa25.34■■□□□ 1.65
CDKN3-204ENST00000442975 ATP8A2Q9NTI2 1148 aa25.34■■□□□ 1.65
CDKN3-204ENST00000442975 PHIPQ8WWQ0 1821 aa25.33■■□□□ 1.65
CDKN3-204ENST00000442975 FMNL1O95466 1100 aaPredicted RBP25.33■■□□□ 1.65
CDKN3-204ENST00000442975 BCRP11274 1271 aa25.33■■□□□ 1.65
CDKN3-204ENST00000442975 PSMC4P43686 418 aa25.33■■□□□ 1.65
CDKN3-204ENST00000442975 SLC44A5Q8NCS7 719 aa25.33■■□□□ 1.65
CDKN3-204ENST00000442975 APPBP2Q92624 585 aa25.33■■□□□ 1.65
CDKN3-204ENST00000442975 FSD1Q9BTV5 496 aa25.33■■□□□ 1.65
CDKN3-204ENST00000442975 PTCH2Q9Y6C5 1203 aa25.33■■□□□ 1.65
CDKN3-204ENST00000442975 ATAD5Q96QE3 1844 aa25.33■■□□□ 1.64
CDKN3-204ENST00000442975 USP17L10C9JJH3 530 aa25.32■■□□□ 1.64
CDKN3-204ENST00000442975 MPHOSPH10O00566 681 aaKnown RBP25.32■■□□□ 1.64
CDKN3-204ENST00000442975 RNF113AO15541 343 aaKnown RBP25.32■■□□□ 1.64
CDKN3-204ENST00000442975 GABPAQ06546 454 aa25.32■■□□□ 1.64
CDKN3-204ENST00000442975 ZYXQ15942 572 aaKnown RBP25.32■■□□□ 1.64
CDKN3-204ENST00000442975 SH3D19Q5HYK7 790 aa25.32■■□□□ 1.64
CDKN3-204ENST00000442975 TRIM47Q96LD4 638 aa25.32■■□□□ 1.64
CDKN3-204ENST00000442975 CABP5Q9NP86 173 aa25.32■■□□□ 1.64
CDKN3-204ENST00000442975 MYH1P12882 1939 aa25.31■■□□□ 1.64
CDKN3-204ENST00000442975 CYP2D7A0A087X1C5 515 aa25.31■■□□□ 1.64
CDKN3-204ENST00000442975 ZFYP08048 801 aaPredicted RBP25.31■■□□□ 1.64
CDKN3-204ENST00000442975 CTGFP29279 349 aa25.31■■□□□ 1.64
CDKN3-204ENST00000442975 LRRFIP1Q32MZ4 808 aaKnown RBP25.31■■□□□ 1.64
CDKN3-204ENST00000442975 DYNLL2Q96FJ2 89 aa25.31■■□□□ 1.64
CDKN3-204ENST00000442975 RWDD1Q9H446 243 aaPredicted RBP25.31■■□□□ 1.64
CDKN3-204ENST00000442975 OSBPP22059 807 aa25.3■■□□□ 1.64
CDKN3-204ENST00000442975 FCGRTP55899 365 aa25.3■■□□□ 1.64
CDKN3-204ENST00000442975 IRX3P78415 501 aaPredicted RBP25.3■■□□□ 1.64
CDKN3-204ENST00000442975 SLC9C1Q4G0N8 1177 aa25.3■■□□□ 1.64
CDKN3-204ENST00000442975 ANKRD13CQ8N6S4 541 aa25.3■■□□□ 1.64
CDKN3-204ENST00000442975 OSBP2Q969R2 916 aa25.3■■□□□ 1.64
CDKN3-204ENST00000442975 LNPKQ9C0E8 428 aa25.3■■□□□ 1.64
CDKN3-204ENST00000442975 LOC285556D6RIA3 1793 aa25.29■■□□□ 1.64
CDKN3-204ENST00000442975 C19orf81C9J6K1 198 aa25.29■■□□□ 1.64
CDKN3-204ENST00000442975 USP17L12C9JPN9 530 aa25.29■■□□□ 1.64
CDKN3-204ENST00000442975 USP17L21D6R901 530 aa25.29■■□□□ 1.64
CDKN3-204ENST00000442975 B4GALNT3Q6L9W6 998 aa25.29■■□□□ 1.64
CDKN3-204ENST00000442975 STRBPQ96SI9 672 aaKnown RBP25.29■■□□□ 1.64
CDKN3-204ENST00000442975 ASCC2Q9H1I8 757 aaPredicted RBP25.29■■□□□ 1.64
CDKN3-204ENST00000442975 SWAP70Q9UH65 585 aa25.29■■□□□ 1.64
CDKN3-204ENST00000442975 SALL3Q9BXA9 1300 aa25.29■■□□□ 1.64
CDKN3-204ENST00000442975 PTPRFP10586 1907 aa25.29■■□□□ 1.64
CDKN3-204ENST00000442975 ZSWIM8A7E2V4 1837 aa25.28■■□□□ 1.64
CDKN3-204ENST00000442975 M0R2C6 588 aa25.28■■□□□ 1.64
CDKN3-204ENST00000442975 GPAA1O43292 621 aa25.28■■□□□ 1.64
CDKN3-204ENST00000442975 GNRH1P01148 92 aa25.28■■□□□ 1.64
CDKN3-204ENST00000442975 MLLT1Q03111 559 aaPredicted RBP25.28■■□□□ 1.64
CDKN3-204ENST00000442975 SMIM22K7EJ46 135 aa25.27■■□□□ 1.64
CDKN3-204ENST00000442975 IRX6P78412 446 aaPredicted RBP25.27■■□□□ 1.64
CDKN3-204ENST00000442975 SEPT2Q15019 361 aa25.27■■□□□ 1.64
CDKN3-204ENST00000442975 C12orf60Q5U649 245 aa25.27■■□□□ 1.64
CDKN3-204ENST00000442975 USP17L2Q6R6M4 530 aa25.27■■□□□ 1.64
CDKN3-204ENST00000442975 ARPP21Q9UBL0 812 aaPredicted RBP25.27■■□□□ 1.64
CDKN3-204ENST00000442975 MYPNQ86TC9 1320 aa25.27■■□□□ 1.64
CDKN3-204ENST00000442975 HOXD10P28358 340 aa25.26■■□□□ 1.63
CDKN3-204ENST00000442975 ACER1Q8TDN7 264 aa25.26■■□□□ 1.63
CDKN3-204ENST00000442975 ARMC5Q96C12 935 aa25.26■■□□□ 1.63
CDKN3-204ENST00000442975 EMILIN3Q9NT22 766 aa25.26■■□□□ 1.63
CDKN3-204ENST00000442975 SRRDQ9UH36 339 aa25.26■■□□□ 1.63
CDKN3-204ENST00000442975 MYCP01106 439 aaPredicted RBP25.25■■□□□ 1.63
CDKN3-204ENST00000442975 GCLCP48506 637 aaPredicted RBP25.25■■□□□ 1.63
CDKN3-204ENST00000442975 RGS19P49795 217 aa25.25■■□□□ 1.63
CDKN3-204ENST00000442975 PDE1AP54750 535 aa25.25■■□□□ 1.63
CDKN3-204ENST00000442975 PRMT2P55345 433 aa25.25■■□□□ 1.63
CDKN3-204ENST00000442975 FAM110CQ1W6H9 321 aa25.25■■□□□ 1.63
CDKN3-204ENST00000442975 CTR9Q6PD62 1173 aa25.25■■□□□ 1.63
CDKN3-204ENST00000442975 SMC5Q8IY18 1101 aa25.25■■□□□ 1.63
CDKN3-204ENST00000442975 RAET1EQ8TD07 263 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms