RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RRP1BQ14684 758 aaKnown RBP18■□□□□ 0.47
CSNK1E-210ENST00000442216 CCL15Q16663 113 aa18■□□□□ 0.47
CSNK1E-210ENST00000442216 NACAP1Q9BZK3 213 aa18■□□□□ 0.47
CSNK1E-210ENST00000442216 AS3MTQ9HBK9 375 aa18■□□□□ 0.47
CSNK1E-210ENST00000442216 GSPT1P15170 499 aaKnown RBP17.99■□□□□ 0.47
CSNK1E-210ENST00000442216 SHMT1P34896 483 aa17.99■□□□□ 0.47
CSNK1E-210ENST00000442216 MFAP1P55081 439 aaKnown RBP17.99■□□□□ 0.47
CSNK1E-210ENST00000442216 CERKLQ49MI3 558 aaPredicted RBP17.99■□□□□ 0.47
CSNK1E-210ENST00000442216 IFNL3Q8IZI9 196 aa17.99■□□□□ 0.47
CSNK1E-210ENST00000442216 BRI3BPQ8WY22 251 aa17.99■□□□□ 0.47
CSNK1E-210ENST00000442216 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
CSNK1E-210ENST00000442216 A0A0D9SFI3 127 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 IGF2BP3O00425 579 aaKnown RBP eCLIP17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 APPP05067 770 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 CYP2D6P10635 497 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 NOM1Q5C9Z4 860 aaKnown RBP17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 C16orf86Q6ZW13 317 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 FAM227BQ96M60 508 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 PTPN18Q99952 460 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 WDR18Q9BV38 432 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 EPB41L4AQ9HCS5 686 aaPredicted RBP17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 ZBTB21Q9ULJ3 1066 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 ROBO3Q96MS0 1386 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 LOC285556D6RIA3 1793 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 PCNTO95613 3336 aa17.98■□□□□ 0.47
CSNK1E-210ENST00000442216 CASP8AP2Q9UKL3 1982 aa17.97■□□□□ 0.47
CSNK1E-210ENST00000442216 A0A0G2JLL6 359 aaPredicted RBP17.97■□□□□ 0.47
CSNK1E-210ENST00000442216 TDO2P48775 406 aa17.97■□□□□ 0.47
CSNK1E-210ENST00000442216 FASTKD5Q7L8L6 764 aaKnown RBP17.97■□□□□ 0.47
CSNK1E-210ENST00000442216 PRRT2Q7Z6L0 340 aaPredicted RBP17.97■□□□□ 0.47
CSNK1E-210ENST00000442216 ZNF280CQ8ND82 737 aa17.97■□□□□ 0.47
CSNK1E-210ENST00000442216 NAPBQ9H115 298 aa17.97■□□□□ 0.47
CSNK1E-210ENST00000442216 CABP5Q9NP86 173 aa17.97■□□□□ 0.47
CSNK1E-210ENST00000442216 DIAPH3Q9NSV4 1193 aa17.97■□□□□ 0.47
CSNK1E-210ENST00000442216 GDF11O95390 407 aa17.96■□□□□ 0.47
CSNK1E-210ENST00000442216 CDK8P49336 464 aa17.96■□□□□ 0.47
CSNK1E-210ENST00000442216 LBX1P52954 281 aa17.96■□□□□ 0.47
CSNK1E-210ENST00000442216 ALX1Q15699 326 aa17.96■□□□□ 0.47
CSNK1E-210ENST00000442216 ABCB5Q2M3G0 1257 aa17.96■□□□□ 0.47
CSNK1E-210ENST00000442216 CCDC129Q6ZRS4 1044 aa17.96■□□□□ 0.47
CSNK1E-210ENST00000442216 ANKRD23Q86SG2 305 aa17.96■□□□□ 0.47
CSNK1E-210ENST00000442216 CCDC17Q96LX7 622 aa17.96■□□□□ 0.47
CSNK1E-210ENST00000442216 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
CSNK1E-210ENST00000442216 ZMYM6O95789 1325 aa17.96■□□□□ 0.46
CSNK1E-210ENST00000442216 CCDC171Q6TFL3 1326 aa17.96■□□□□ 0.46
CSNK1E-210ENST00000442216 CYP2D7A0A087X1C5 515 aa17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 BTBD19C9JJ37 291 aa17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 GH2P01242 217 aa17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 JAG1P78504 1218 aa17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 EVX2Q03828 476 aa17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 MOGSQ13724 837 aa17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 SH3D19Q5HYK7 790 aa17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 DYNLL2Q96FJ2 89 aa17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 ZNF287Q9HBT7 754 aa17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 GREB1LQ9C091 1923 aaPredicted RBP17.95■□□□□ 0.46
CSNK1E-210ENST00000442216 TRIM75PA6NK02 468 aa17.94■□□□□ 0.46
CSNK1E-210ENST00000442216 MINDY4BA8MYZ0 360 aa17.94■□□□□ 0.46
CSNK1E-210ENST00000442216 C19orf81C9J6K1 198 aa17.94■□□□□ 0.46
CSNK1E-210ENST00000442216 FOXP2O15409 715 aa17.94■□□□□ 0.46
CSNK1E-210ENST00000442216 SPP2Q13103 211 aa17.94■□□□□ 0.46
CSNK1E-210ENST00000442216 CWC27Q6UX04 472 aaKnown RBP17.94■□□□□ 0.46
CSNK1E-210ENST00000442216 FAM43AQ8N2R8 423 aa17.94■□□□□ 0.46
CSNK1E-210ENST00000442216 PROCA1Q8NCQ7 364 aaPredicted RBP17.94■□□□□ 0.46
CSNK1E-210ENST00000442216 SLC45A1Q9Y2W3 748 aa17.94■□□□□ 0.46
CSNK1E-210ENST00000442216 USP17L10C9JJH3 530 aa17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 TBC1D8O95759 1140 aa17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 SLC3A2P08195 630 aaKnown RBP17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 BACE1P56817 501 aa17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 TMEM179Q6ZVK1 233 aa17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 ZNF589Q86UQ0 364 aaPredicted RBP17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 CCDC84Q86UT8 332 aaPredicted RBP17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 SLC44A5Q8NCS7 719 aa17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 RUFY2Q8WXA3 655 aa17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 TSKSQ9UJT2 592 aa17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 RAD50Q92878 1312 aa17.93■□□□□ 0.46
CSNK1E-210ENST00000442216 PPARAQ07869 468 aa17.92■□□□□ 0.46
CSNK1E-210ENST00000442216 TAF1CQ15572 869 aaPredicted RBP17.92■□□□□ 0.46
CSNK1E-210ENST00000442216 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
CSNK1E-210ENST00000442216 VPS53Q5VIR6 699 aa17.92■□□□□ 0.46
CSNK1E-210ENST00000442216 ZFYVE28Q9HCC9 887 aa17.92■□□□□ 0.46
CSNK1E-210ENST00000442216 ANAPC4Q9UJX5 808 aa17.92■□□□□ 0.46
CSNK1E-210ENST00000442216 LAMA4Q16363 1823 aa17.92■□□□□ 0.46
CSNK1E-210ENST00000442216 SMIM22K7EJ46 135 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 GPR25O00155 361 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 PDHXO00330 501 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 GUCY1A2P33402 732 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 PDE4BQ07343 736 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 CRHR2Q13324 411 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 RAB3GAP1Q15042 981 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 BMP2KLQ5H9B9 411 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 GPAT2Q6NUI2 795 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 MKNK2Q9HBH9 465 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 AGTPBP1Q9UPW5 1226 aa17.91■□□□□ 0.46
CSNK1E-210ENST00000442216 MPHOSPH10O00566 681 aaKnown RBP17.9■□□□□ 0.46
CSNK1E-210ENST00000442216 FGAP02671 866 aa17.9■□□□□ 0.46
CSNK1E-210ENST00000442216 AKR1B1P15121 316 aa17.9■□□□□ 0.46
CSNK1E-210ENST00000442216 CHMLP26374 656 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms