RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 SHROOM1Q2M3G4 852 aaPredicted RBP16.06■□□□□ 0.16
SP4-203ENST00000440636 NAA16Q6N069 864 aaPredicted RBP16.06■□□□□ 0.16
SP4-203ENST00000440636 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
SP4-203ENST00000440636 NOL10Q9BSC4 688 aaKnown RBP16.06■□□□□ 0.16
SP4-203ENST00000440636 C11orf49Q9H6J7 331 aa16.06■□□□□ 0.16
SP4-203ENST00000440636 TMOD4Q9NZQ9 345 aa16.06■□□□□ 0.16
SP4-203ENST00000440636 DNAH12Q6ZR08 3092 aa16.06■□□□□ 0.16
SP4-203ENST00000440636 LAMA2P24043 3122 aaKnown RBP16.05■□□□□ 0.16
SP4-203ENST00000440636 FOCADQ5VW36 1801 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 C19orf81C9J6K1 198 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
SP4-203ENST00000440636 TRIM27P14373 513 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 PLCG2P16885 1265 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 GPR153Q6NV75 609 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 MAPKAPK5Q8IW41 473 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 GPRC5AQ8NFJ5 357 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 TGFBRAP1Q8WUH2 860 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 SOCS4Q8WXH5 440 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 NUDT12Q9BQG2 462 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 RBPJLQ9UBG7 517 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 TNNQ9UQP3 1299 aa16.05■□□□□ 0.16
SP4-203ENST00000440636 PFASO15067 1338 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 USP17L10C9JJH3 530 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 DLL1O00548 723 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 GDF11O95390 407 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 SYN1P17600 705 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 Q3C1V9 767 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 POTEEQ6S8J3 1075 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 FOXP4Q8IVH2 680 aaPredicted RBP16.04■□□□□ 0.16
SP4-203ENST00000440636 USP6NLQ92738 828 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 GINM1Q9NU53 330 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 PALD1Q9ULE6 856 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 ZBTB21Q9ULJ3 1066 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 UNC80Q8N2C7 3258 aa16.04■□□□□ 0.16
SP4-203ENST00000440636 CYP2E1P05181 493 aaPredicted RBP16.03■□□□□ 0.16
SP4-203ENST00000440636 MAPK4P31152 587 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 MAGEA10P43363 369 aaPredicted RBP16.03■□□□□ 0.16
SP4-203ENST00000440636 ERVK-9P63128 1117 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 ERVK-24P63145 666 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 TNNI3KQ59H18 835 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 TTC39AQ5SRH9 613 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 ATF7IPQ6VMQ6 1270 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 CRACR2BQ8N4Y2 399 aaPredicted RBP16.03■□□□□ 0.16
SP4-203ENST00000440636 DBNDD2Q9BQY9 259 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 PORCNQ9H237 461 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 GPR108Q9NPR9 543 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 FPGT-TNNI3KV9GXZ4 949 aa16.03■□□□□ 0.16
SP4-203ENST00000440636 MYO5AQ9Y4I1 1855 aaKnown RBP16.03■□□□□ 0.16
SP4-203ENST00000440636 IPO8O15397 1037 aaKnown RBP16.02■□□□□ 0.16
SP4-203ENST00000440636 COL6A1P12109 1028 aa16.02■□□□□ 0.16
SP4-203ENST00000440636 CACNB2Q08289 660 aaPredicted RBP16.02■□□□□ 0.16
SP4-203ENST00000440636 POLA2Q14181 598 aa16.02■□□□□ 0.16
SP4-203ENST00000440636 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
SP4-203ENST00000440636 LRIT3Q3SXY7 679 aa16.02■□□□□ 0.16
SP4-203ENST00000440636 MORN1Q5T089 497 aa16.02■□□□□ 0.16
SP4-203ENST00000440636 GPR142Q7Z601 462 aa16.02■□□□□ 0.16
SP4-203ENST00000440636 TRMT44Q8IYL2 757 aaKnown RBP16.02■□□□□ 0.16
SP4-203ENST00000440636 EMILIN3Q9NT22 766 aa16.02■□□□□ 0.16
SP4-203ENST00000440636 IGSF3O75054 1194 aa16.01■□□□□ 0.15
SP4-203ENST00000440636 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
SP4-203ENST00000440636 CCL14Q16627 93 aa16.01■□□□□ 0.15
SP4-203ENST00000440636 CCDC158Q5M9N0 1113 aa16.01■□□□□ 0.15
SP4-203ENST00000440636 LHX8Q68G74 356 aa16.01■□□□□ 0.15
SP4-203ENST00000440636 TDHQ8IZJ6 230 aa16.01■□□□□ 0.15
SP4-203ENST00000440636 GTF3C2Q8WUA4 911 aaPredicted RBP16.01■□□□□ 0.15
SP4-203ENST00000440636 ZNF512BQ96KM6 892 aaPredicted RBP16.01■□□□□ 0.15
SP4-203ENST00000440636 TRIM34Q9BYJ4 488 aa16.01■□□□□ 0.15
SP4-203ENST00000440636 BCAR3O75815 825 aa16■□□□□ 0.15
SP4-203ENST00000440636 CCND3P30281 292 aaPredicted RBP16■□□□□ 0.15
SP4-203ENST00000440636 RGS2P41220 211 aa16■□□□□ 0.15
SP4-203ENST00000440636 ZAP70P43403 619 aa16■□□□□ 0.15
SP4-203ENST00000440636 DYNLL1P63167 89 aaKnown RBP16■□□□□ 0.15
SP4-203ENST00000440636 USP17L2Q6R6M4 530 aa16■□□□□ 0.15
SP4-203ENST00000440636 PLEKHH3Q7Z736 793 aa16■□□□□ 0.15
SP4-203ENST00000440636 DEFB123Q8N688 67 aa16■□□□□ 0.15
SP4-203ENST00000440636 CLUAP1Q96AJ1 413 aa16■□□□□ 0.15
SP4-203ENST00000440636 APBA2Q99767 749 aa16■□□□□ 0.15
SP4-203ENST00000440636 PAGR1Q9BTK6 254 aa16■□□□□ 0.15
SP4-203ENST00000440636 PIH1D3Q9NQM4 214 aaKnown RBP16■□□□□ 0.15
SP4-203ENST00000440636 SAP30BPQ9UHR5 308 aaKnown RBP16■□□□□ 0.15
SP4-203ENST00000440636 HLA-DOAP06340 250 aa15.99■□□□□ 0.15
SP4-203ENST00000440636 Q7L0L9 218 aa15.99■□□□□ 0.15
SP4-203ENST00000440636 SSH3Q8TE77 659 aa15.99■□□□□ 0.15
SP4-203ENST00000440636 FRAT1Q92837 279 aaPredicted RBP15.99■□□□□ 0.15
SP4-203ENST00000440636 C12orf42Q96LP6 360 aa15.99■□□□□ 0.15
SP4-203ENST00000440636 UBE2OQ9C0C9 1292 aaKnown RBP15.99■□□□□ 0.15
SP4-203ENST00000440636 CNMDO75829 334 aa15.98■□□□□ 0.15
SP4-203ENST00000440636 GH2P01242 217 aa15.98■□□□□ 0.15
SP4-203ENST00000440636 LRRC26Q2I0M4 334 aa15.98■□□□□ 0.15
SP4-203ENST00000440636 TATDN1Q6P1N9 297 aa15.98■□□□□ 0.15
SP4-203ENST00000440636 CCAR1Q8IX12 1150 aaKnown RBP15.98■□□□□ 0.15
SP4-203ENST00000440636 TMEM57Q8N5G2 664 aa15.98■□□□□ 0.15
SP4-203ENST00000440636 DBNLQ9UJU6 430 aaKnown RBP15.98■□□□□ 0.15
SP4-203ENST00000440636 RABGAP1Q9Y3P9 1069 aa15.98■□□□□ 0.15
SP4-203ENST00000440636 MYH1P12882 1939 aa15.98■□□□□ 0.15
SP4-203ENST00000440636 CYP7A1P22680 504 aa15.97■□□□□ 0.15
SP4-203ENST00000440636 ATP8B2P98198 1209 aa15.97■□□□□ 0.15
SP4-203ENST00000440636 MAP2K5Q13163 448 aa15.97■□□□□ 0.15
SP4-203ENST00000440636 OS9Q13438 667 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms