RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 LBHD1Q9BQE6 289 aaPredicted RBP16.41■□□□□ 0.22
FAM3A-213ENST00000440318 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
FAM3A-213ENST00000440318 USP17L5A8MUK1 530 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 CIAO1O76071 339 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 HERVK_113P62684 666 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 MECOMQ03112 1051 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 POTEEQ6S8J3 1075 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 GPRC5AQ8NFJ5 357 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 PORCNQ9H237 461 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 CEP126Q9P2H0 1117 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 RBPJLQ9UBG7 517 aa16.4■□□□□ 0.22
FAM3A-213ENST00000440318 ZBTB22O15209 634 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
FAM3A-213ENST00000440318 JAG1P78504 1218 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 PDE3AQ14432 1141 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 Q3C1V9 767 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 MORN1Q5T089 497 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 SLF2Q8IX21 1173 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 TRMT44Q8IYL2 757 aaKnown RBP16.39■□□□□ 0.21
FAM3A-213ENST00000440318 SENP6Q9GZR1 1112 aaPredicted RBP16.39■□□□□ 0.21
FAM3A-213ENST00000440318 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 SIPA1L1O43166 1804 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 MUC3AQ02505 3323 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 TTC28Q96AY4 2481 aa16.39■□□□□ 0.21
FAM3A-213ENST00000440318 MAPK4P31152 587 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 HOXA7P31268 230 aaPredicted RBP16.38■□□□□ 0.21
FAM3A-213ENST00000440318 RGS2P41220 211 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 ATN1P54259 1190 aaPredicted RBP16.38■□□□□ 0.21
FAM3A-213ENST00000440318 SHHQ15465 462 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 C9orf50Q5SZB4 431 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 GPR142Q7Z601 462 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 MYLIPQ8WY64 445 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 APBA2Q99767 749 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 TTYH1Q9H313 450 aaPredicted RBP16.38■□□□□ 0.21
FAM3A-213ENST00000440318 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 COG6Q9Y2V7 657 aa16.38■□□□□ 0.21
FAM3A-213ENST00000440318 PDS5AQ29RF7 1337 aaKnown RBP16.38■□□□□ 0.21
FAM3A-213ENST00000440318 MS4A1P11836 297 aa16.37■□□□□ 0.21
FAM3A-213ENST00000440318 BACE1P56817 501 aa16.37■□□□□ 0.21
FAM3A-213ENST00000440318 ERVK-9P63128 1117 aa16.37■□□□□ 0.21
FAM3A-213ENST00000440318 ERVK-24P63145 666 aa16.37■□□□□ 0.21
FAM3A-213ENST00000440318 SHROOM1Q2M3G4 852 aaPredicted RBP16.37■□□□□ 0.21
FAM3A-213ENST00000440318 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
FAM3A-213ENST00000440318 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
FAM3A-213ENST00000440318 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
FAM3A-213ENST00000440318 TIMM10P62072 90 aa16.36■□□□□ 0.21
FAM3A-213ENST00000440318 SPTY2D1Q68D10 685 aaPredicted RBP16.36■□□□□ 0.21
FAM3A-213ENST00000440318 PLEKHH3Q7Z736 793 aa16.36■□□□□ 0.21
FAM3A-213ENST00000440318 MEIS3Q99687 375 aa16.36■□□□□ 0.21
FAM3A-213ENST00000440318 PAGR1Q9BTK6 254 aa16.36■□□□□ 0.21
FAM3A-213ENST00000440318 TMOD4Q9NZQ9 345 aa16.36■□□□□ 0.21
FAM3A-213ENST00000440318 IL15P40933 162 aaPredicted RBP16.35■□□□□ 0.21
FAM3A-213ENST00000440318 RTP1P59025 263 aa16.35■□□□□ 0.21
FAM3A-213ENST00000440318 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
FAM3A-213ENST00000440318 DNAJC18Q9H819 358 aa16.35■□□□□ 0.21
FAM3A-213ENST00000440318 IRX6P78412 446 aaPredicted RBP16.34■□□□□ 0.21
FAM3A-213ENST00000440318 MAP2K5Q13163 448 aa16.34■□□□□ 0.21
FAM3A-213ENST00000440318 MVPQ14764 893 aaKnown RBP16.34■□□□□ 0.21
FAM3A-213ENST00000440318 PI16Q6UXB8 463 aa16.34■□□□□ 0.21
FAM3A-213ENST00000440318 CCAR1Q8IX12 1150 aaKnown RBP16.34■□□□□ 0.21
FAM3A-213ENST00000440318 NSUN4Q96CB9 384 aaKnown RBP16.34■□□□□ 0.21
FAM3A-213ENST00000440318 DDX20Q9UHI6 824 aaKnown RBP16.34■□□□□ 0.21
FAM3A-213ENST00000440318 HERC5Q9UII4 1024 aaKnown RBP16.34■□□□□ 0.21
FAM3A-213ENST00000440318 NDUFB9Q9Y6M9 179 aa16.34■□□□□ 0.21
FAM3A-213ENST00000440318 DNM1LO00429 736 aa16.33■□□□□ 0.2
FAM3A-213ENST00000440318 UBTFL1P0CB47 393 aaPredicted RBP16.33■□□□□ 0.2
FAM3A-213ENST00000440318 FOSL2P15408 326 aa16.33■□□□□ 0.2
FAM3A-213ENST00000440318 COL9A1P20849 921 aa16.33■□□□□ 0.2
FAM3A-213ENST00000440318 TBC1D9Q6ZT07 1266 aa16.33■□□□□ 0.2
FAM3A-213ENST00000440318 SH3RF3Q8TEJ3 882 aaPredicted RBP16.33■□□□□ 0.2
FAM3A-213ENST00000440318 LPAR1Q92633 364 aa16.33■□□□□ 0.2
FAM3A-213ENST00000440318 PRKAG2Q9UGJ0 569 aa16.33■□□□□ 0.2
FAM3A-213ENST00000440318 ATP11BQ9Y2G3 1177 aa16.33■□□□□ 0.2
FAM3A-213ENST00000440318 RLFQ13129 1914 aa16.33■□□□□ 0.2
FAM3A-213ENST00000440318 C19orf81C9J6K1 198 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 USP17L10C9JJH3 530 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 CNMDO75829 334 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 GDF11O95390 407 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 ASNSP08243 561 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 SMAD3P84022 425 aaKnown RBP16.32■□□□□ 0.2
FAM3A-213ENST00000440318 MFSD14CQ5VZR4 134 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 TRPV1Q8NER1 839 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 EDC3Q96F86 508 aaKnown RBP16.32■□□□□ 0.2
FAM3A-213ENST00000440318 XAGE2Q96GT9 111 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 CRBNQ96SW2 442 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 C1orf115Q9H7X2 142 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 HMG20BQ9P0W2 317 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 RAPGEFL1Q9UHV5 662 aa16.32■□□□□ 0.2
FAM3A-213ENST00000440318 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.32■□□□□ 0.2
FAM3A-213ENST00000440318 A0A1B0GUL7 405 aa16.31■□□□□ 0.2
FAM3A-213ENST00000440318 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
FAM3A-213ENST00000440318 CNGA1P29973 690 aa16.31■□□□□ 0.2
FAM3A-213ENST00000440318 GJC2Q5T442 439 aaPredicted RBP16.31■□□□□ 0.2
FAM3A-213ENST00000440318 USP38Q8NB14 1042 aa16.31■□□□□ 0.2
FAM3A-213ENST00000440318 SYMPKQ92797 1274 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms