RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 ECE2O60344 883 aa17.35■□□□□ 0.37
IFT140-204ENST00000439987 ATL3Q6DD88 541 aa17.35■□□□□ 0.37
IFT140-204ENST00000439987 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
IFT140-204ENST00000439987 MKNK2Q9HBH9 465 aa17.35■□□□□ 0.37
IFT140-204ENST00000439987 KCNQ5Q9NR82 932 aa17.35■□□□□ 0.37
IFT140-204ENST00000439987 GOLGB1Q14789 3259 aaKnown RBP17.35■□□□□ 0.37
IFT140-204ENST00000439987 TPRNQ4KMQ1 711 aa17.35■□□□□ 0.37
IFT140-204ENST00000439987 STRIP1Q5VSL9 837 aa17.35■□□□□ 0.37
IFT140-204ENST00000439987 FOCADQ5VW36 1801 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 ECM29Q5VYK3 1845 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 CALM1P0DP23 149 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 CALM2P0DP24 149 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 CALM3P0DP25 149 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 TFAP4Q01664 338 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 TROAPQ12815 778 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 HHIPL2Q6UWX4 724 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 NBPF11Q86T75 865 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 TRIM22Q8IYM9 498 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 TTLL6Q8N841 843 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 SUPT20HQ8NEM7 779 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 ZNF396Q96N95 335 aaPredicted RBP17.34■□□□□ 0.37
IFT140-204ENST00000439987 C21orf2O43822 256 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 DDAH1O94760 285 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 SCNN1DP51172 638 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 FKBP1AP62942 108 aaKnown RBP17.34■□□□□ 0.37
IFT140-204ENST00000439987 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 AOC3Q16853 763 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 CRACR2BQ8N4Y2 399 aaPredicted RBP17.34■□□□□ 0.37
IFT140-204ENST00000439987 WASF1Q92558 559 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 ZNF287Q9HBT7 754 aa17.34■□□□□ 0.37
IFT140-204ENST00000439987 SCN9AQ15858 1988 aa17.33■□□□□ 0.37
IFT140-204ENST00000439987 KRT40Q6A162 431 aa17.33■□□□□ 0.36
IFT140-204ENST00000439987 BRAPQ7Z569 592 aa17.33■□□□□ 0.36
IFT140-204ENST00000439987 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
IFT140-204ENST00000439987 TEKT1Q969V4 418 aa17.33■□□□□ 0.36
IFT140-204ENST00000439987 MYH1P12882 1939 aa17.33■□□□□ 0.36
IFT140-204ENST00000439987 KIF23Q02241 960 aaPredicted RBP17.33■□□□□ 0.36
IFT140-204ENST00000439987 GRIPAP1Q4V328 841 aa17.33■□□□□ 0.36
IFT140-204ENST00000439987 DACT2Q5SW24 774 aa17.33■□□□□ 0.36
IFT140-204ENST00000439987 RCSD1Q6JBY9 416 aa17.33■□□□□ 0.36
IFT140-204ENST00000439987 C16orf86Q6ZW13 317 aa17.33■□□□□ 0.36
IFT140-204ENST00000439987 ZNF444Q8N0Y2 327 aaPredicted RBP17.33■□□□□ 0.36
IFT140-204ENST00000439987 CMTR1Q8N1G2 835 aaKnown RBP17.33■□□□□ 0.36
IFT140-204ENST00000439987 SYCE3A1L190 88 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 UBE2Q2LH0YL09 131 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 CCDC82Q8N4S0 544 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 USP28Q96RU2 1077 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 RBM28Q9NW13 759 aaKnown RBP17.32■□□□□ 0.36
IFT140-204ENST00000439987 USP17L3A6NCW0 530 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 USP17L4A6NCW7 530 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 RASA1P20936 1047 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 TRIM29Q14134 588 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 USP17L1Q7RTZ2 530 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 DGKHQ86XP1 1220 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 IL17RBQ9NRM6 502 aa17.32■□□□□ 0.36
IFT140-204ENST00000439987 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 KIF28PB7ZC32 967 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 WDHD1O75717 1129 aaPredicted RBP17.31■□□□□ 0.36
IFT140-204ENST00000439987 DEXIO95424 95 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 TSPY3P0CV98 308 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 TSPY8P0CW00 308 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 DPEP1P16444 411 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 KCNA3P22001 575 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 GUCY1A2P33402 732 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 CDK8P49336 464 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 CEBPZQ03701 1054 aaKnown RBP17.31■□□□□ 0.36
IFT140-204ENST00000439987 CCDC178Q5BJE1 867 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 CCDC183Q5T5S1 534 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 FTOQ9C0B1 505 aaKnown RBP eCLIP17.31■□□□□ 0.36
IFT140-204ENST00000439987 TCP11L1Q9NUJ3 509 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 USP40Q9NVE5 1235 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 RCOR1Q9UKL0 485 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 CCDC93Q567U6 631 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
IFT140-204ENST00000439987 ANKS1AQ92625 1134 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 MRIQ9BWK5 157 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 RNF26Q9BY78 433 aaPredicted RBP17.31■□□□□ 0.36
IFT140-204ENST00000439987 PDCL3Q9H2J4 239 aa17.31■□□□□ 0.36
IFT140-204ENST00000439987 ADAMTSL1Q8N6G6 1762 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 ZNF646O15015 1829 aaPredicted RBP17.3■□□□□ 0.36
IFT140-204ENST00000439987 CRKP46108 304 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 PICALMQ13492 652 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 LRSAM1Q6UWE0 723 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 KIAA0825Q8IV33 1275 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 PGBD1Q96JS3 809 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 KIF13BQ9NQT8 1826 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 FUT2Q10981 343 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 MYSM1Q5VVJ2 828 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 CDC42EP5Q6NZY7 148 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 RTKN2Q8IZC4 609 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 ZDHHC15Q96MV8 337 aa17.3■□□□□ 0.36
IFT140-204ENST00000439987 DDX4Q9NQI0 724 aaKnown RBP17.3■□□□□ 0.36
IFT140-204ENST00000439987 CTCFLQ8NI51 663 aaPredicted RBP17.29■□□□□ 0.36
IFT140-204ENST00000439987 KAT14Q9H8E8 782 aa17.29■□□□□ 0.36
IFT140-204ENST00000439987 TAOK2Q9UL54 1235 aa17.29■□□□□ 0.36
IFT140-204ENST00000439987 PLEKHA8P1O95397 391 aa17.29■□□□□ 0.36
IFT140-204ENST00000439987 HDLBPQ00341 1268 aaKnown RBP17.29■□□□□ 0.36
IFT140-204ENST00000439987 TMTC3Q6ZXV5 915 aa17.29■□□□□ 0.36
IFT140-204ENST00000439987 PSMD1Q99460 953 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms