RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CCDC178Q5BJE1 867 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 ADALQ6DHV7 355 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 CCDC73Q6ZRK6 1079 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 TGFBRAP1Q8WUH2 860 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 ANKS1AQ92625 1134 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 PCDHA7Q9UN72 937 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 TSPY2A6NKD2 308 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 UBE2Q2LH0YL09 131 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 SPTLC2O15270 562 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 CTAGE5O15320 804 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 PRPF3O43395 683 aaKnown RBP13.64□□□□□ -0.23
SMAD3-202ENST00000439724 GUCY1A2P33402 732 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 RHBDL3P58872 404 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 SAFBQ15424 915 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMAD3-202ENST00000439724 MSL1Q68DK7 614 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 STYK1Q6J9G0 422 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 DPP8Q6V1X1 898 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-202ENST00000439724 FAM43AQ8N2R8 423 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 ENGASEQ8NFI3 743 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMAD3-202ENST00000439724 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
SMAD3-202ENST00000439724 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-202ENST00000439724 GOLPH3LQ9H4A5 285 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 GTF2IP78347 998 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 GNL2Q13823 731 aaKnown RBP13.63□□□□□ -0.23
SMAD3-202ENST00000439724 SLC39A14Q15043 492 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 CAMK4Q16566 473 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 FAM47AQ5JRC9 791 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 RCSD1Q6JBY9 416 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 POTEAQ6S8J7 498 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 DGKHQ86XP1 1220 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 TEX11Q8IYF3 940 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 FSIP1Q8NA03 581 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 MRPS27Q92552 414 aaKnown RBP13.63□□□□□ -0.23
SMAD3-202ENST00000439724 CAMKK2Q96RR4 588 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 EYA3Q99504 573 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 FOXP1Q9H334 677 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-202ENST00000439724 ANO8Q9HCE9 1232 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-202ENST00000439724 TCP11L1Q9NUJ3 509 aa13.63□□□□□ -0.23
SMAD3-202ENST00000439724 FLT1P17948 1338 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 RIMBP2O15034 1052 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 NMT2O60551 498 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 AKAP17AQ02040 695 aaKnown RBP13.62□□□□□ -0.23
SMAD3-202ENST00000439724 TYRO3Q06418 890 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 SNW1Q13573 536 aaKnown RBP13.62□□□□□ -0.23
SMAD3-202ENST00000439724 SF3A1Q15459 793 aaKnown RBP13.62□□□□□ -0.23
SMAD3-202ENST00000439724 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 NOSTRINQ8IVI9 506 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 MAPKAPK5Q8IW41 473 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 CTCFLQ8NI51 663 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-202ENST00000439724 TRIM44Q96DX7 344 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-202ENST00000439724 MAP3K14Q99558 947 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 ZNF287Q9HBT7 754 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 DAGLAQ9Y4D2 1042 aa13.62□□□□□ -0.23
SMAD3-202ENST00000439724 CNTNAP5Q8WYK1 1306 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 H0YIN7 160 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
SMAD3-202ENST00000439724 PPP6R2O75170 966 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 PLEKHA8P1O95397 391 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 XBP1P17861 261 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 TFAP4Q01664 338 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 PTPAQ15257 358 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 PKN1Q16512 942 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 OLFM4Q6UX06 510 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 DIS3L2Q8IYB7 885 aaKnown RBP13.61□□□□□ -0.23
SMAD3-202ENST00000439724 CMTR1Q8N1G2 835 aaKnown RBP13.61□□□□□ -0.23
SMAD3-202ENST00000439724 JMYQ8N9B5 988 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 DYNLL2Q96FJ2 89 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 STK32BQ9NY57 414 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 MRVI1Q9Y6F6 885 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 ZNF646O15015 1829 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-202ENST00000439724 SLX4Q8IY92 1834 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 SNED1Q8TER0 1413 aa13.61□□□□□ -0.23
SMAD3-202ENST00000439724 RASA1P20936 1047 aa13.6□□□□□ -0.23
SMAD3-202ENST00000439724 KIF5BP33176 963 aa13.6□□□□□ -0.23
SMAD3-202ENST00000439724 EZH2Q15910 746 aaKnown RBP13.6□□□□□ -0.23
SMAD3-202ENST00000439724 HS1BP3Q53T59 392 aa13.6□□□□□ -0.23
SMAD3-202ENST00000439724 AXDND1Q5T1B0 1012 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-202ENST00000439724 CKAP2LQ8IYA6 745 aa13.6□□□□□ -0.23
SMAD3-202ENST00000439724 FMR1NBQ8N0W7 255 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-202ENST00000439724 CCDC82Q8N4S0 544 aa13.6□□□□□ -0.23
SMAD3-202ENST00000439724 CERS5Q8N5B7 392 aa13.6□□□□□ -0.23
SMAD3-202ENST00000439724 ZNF622Q969S3 477 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMAD3-202ENST00000439724 MKNK2Q9HBH9 465 aa13.6□□□□□ -0.23
SMAD3-202ENST00000439724 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
SMAD3-202ENST00000439724 KCNJ14Q9UNX9 436 aa13.6□□□□□ -0.23
SMAD3-202ENST00000439724 BTBD18B2RXH4 712 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 CMA1P23946 247 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 PLCD1P51178 756 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 RILPL1Q5EBL4 403 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 PODNQ7Z5L7 613 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 ZNF444Q8N0Y2 327 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-202ENST00000439724 FAM200AQ8TCP9 573 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 KAT14Q9H8E8 782 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms