RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 V9GY48 417 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 TNS3Q68CZ2 1445 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 ZSCAN12O43309 604 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 TADA3O75528 432 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 ZNF174Q15697 407 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 LPIN2Q92539 896 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 MRPL44Q9H9J2 332 aaKnown RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 H0YHG0 523 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 SRGAP2O75044 1071 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 CYP19A1P11511 503 aaPredicted RBP11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 MYL5Q02045 173 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 FMR1NBQ8N0W7 255 aaPredicted RBP11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 VPS16Q9H269 839 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 ABCB6Q9NP58 842 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 UQCRFS1P1P0C7P4 283 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 CRKLP46109 303 aaKnown RBP11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 GRIN1Q05586 938 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 CCDC152Q4G0S7 254 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 PARP3Q9Y6F1 533 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 TEX33O43247 280 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 PTPROQ16827 1216 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 FAM98CQ17RN3 349 aaKnown RBP11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 STRBPQ96SI9 672 aaKnown RBP11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 SLF1Q9BQI6 1058 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 VAT1LQ9HCJ6 419 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 AATFQ9NY61 560 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 KCNH3Q9ULD8 1083 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 SAMM50Q9Y512 469 aa11.29□□□□□ -0.6
CDC42SE1-202ENST00000439374 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 MNAT1P51948 309 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 CHRNDQ07001 517 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 TTC31Q49AM3 519 aaPredicted RBP11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 EHD4Q9H223 541 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 RTEL1Q9NZ71 1219 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 TRIM10Q9UDY6 481 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 NALCNQ8IZF0 1738 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 MST1RQ04912 1400 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 KIF5CO60282 957 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 NLRP12P59046 1061 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 GPR101Q96P66 508 aaPredicted RBP11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 HDAC6Q9UBN7 1215 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 NMT2O60551 498 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 RNASE9P60153 205 aaKnown RBP11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 AKNAD1Q5T1N1 836 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 IL17RAQ96F46 866 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 PNKPQ96T60 521 aa11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 NUP88Q99567 741 aaPredicted RBP11.28□□□□□ -0.6
CDC42SE1-202ENST00000439374 UBN2Q6ZU65 1347 aa11.27□□□□□ -0.6
CDC42SE1-202ENST00000439374 FOXP2O15409 715 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 USP49Q70CQ1 688 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 ANKRD18AQ8IVF6 992 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 FAM204AQ9H8W3 233 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 CCDC87Q9NVE4 849 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 GNL3LQ9NVN8 582 aaKnown RBP11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 ANKIB1Q9P2G1 1089 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 SERTAD1Q9UHV2 236 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 LOC102724428A0A0B4J2F2 783 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 SH2B2O14492 632 aaPredicted RBP11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 SIK1P57059 783 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 SARM1Q6SZW1 724 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 SLC35F6Q8N357 371 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 C8orf37Q96NL8 207 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 HOOK1Q9UJC3 728 aaKnown RBP11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 PCDHB6Q9Y5E3 794 aa11.27□□□□□ -0.61
CDC42SE1-202ENST00000439374 USP17L12C9JPN9 530 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 USP17L21D6R901 530 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 ZEB2O60315 1214 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 EVX2Q03828 476 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 SYCP1Q15431 976 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 IFIT1BQ5T764 474 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 BRAPQ7Z569 592 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 ENGASEQ8NFI3 743 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 TSPYL1Q9H0U9 437 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 EPB41L4AQ9HCS5 686 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 NAP1L1P55209 391 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 NGLY1Q96IV0 654 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 STX8Q9UNK0 236 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 TSPY2A6NKD2 308 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 EFCAB8A8MWE9 144 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 CBFA2T2O43439 604 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 CDC25BP30305 580 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 NLRP5P59047 1200 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 VSNL1P62760 191 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 ERFEQ4G0M1 354 aa11.26□□□□□ -0.61
CDC42SE1-202ENST00000439374 TRIM65Q6PJ69 517 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms