RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 ZIC5Q96T25 663 aa20.18■□□□□ 0.82
TARDBP-203ENST00000439080 TAOK2Q9UL54 1235 aa20.18■□□□□ 0.82
TARDBP-203ENST00000439080 SGSM2O43147 1006 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 CDC45O75419 566 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 PTPRAP18433 802 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 MAP2K2P36507 400 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 PPATQ06203 517 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 PPARAQ07869 468 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 PPIL2Q13356 520 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 ALX1Q15699 326 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 CERKLQ49MI3 558 aaPredicted RBP20.16■□□□□ 0.82
TARDBP-203ENST00000439080 STK11IPQ8N1F8 1099 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 ZBTB21Q9ULJ3 1066 aa20.16■□□□□ 0.82
TARDBP-203ENST00000439080 FGAP02671 866 aa20.15■□□□□ 0.82
TARDBP-203ENST00000439080 ASNSP08243 561 aa20.15■□□□□ 0.82
TARDBP-203ENST00000439080 CDK8P49336 464 aa20.15■□□□□ 0.82
TARDBP-203ENST00000439080 JAG1P78504 1218 aa20.15■□□□□ 0.82
TARDBP-203ENST00000439080 KIF23Q02241 960 aaPredicted RBP20.15■□□□□ 0.82
TARDBP-203ENST00000439080 CCDC84Q86UT8 332 aaPredicted RBP20.15■□□□□ 0.82
TARDBP-203ENST00000439080 JMYQ8N9B5 988 aa20.15■□□□□ 0.82
TARDBP-203ENST00000439080 DSCC1Q9BVC3 393 aa20.15■□□□□ 0.82
TARDBP-203ENST00000439080 IRF6O14896 467 aa20.14■□□□□ 0.81
TARDBP-203ENST00000439080 GH2P01242 217 aa20.14■□□□□ 0.81
TARDBP-203ENST00000439080 MYH4Q9Y623 1939 aa20.14■□□□□ 0.81
TARDBP-203ENST00000439080 ABCB5Q2M3G0 1257 aa20.13■□□□□ 0.81
TARDBP-203ENST00000439080 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
TARDBP-203ENST00000439080 ESYT1Q9BSJ8 1104 aa20.13■□□□□ 0.81
TARDBP-203ENST00000439080 GINM1Q9NU53 330 aa20.13■□□□□ 0.81
TARDBP-203ENST00000439080 ZHX2Q9Y6X8 837 aa20.13■□□□□ 0.81
TARDBP-203ENST00000439080 MANSC4A6NHS7 340 aaPredicted RBP20.12■□□□□ 0.81
TARDBP-203ENST00000439080 MPHOSPH10O00566 681 aaKnown RBP20.12■□□□□ 0.81
TARDBP-203ENST00000439080 SLC3A2P08195 630 aaKnown RBP20.12■□□□□ 0.81
TARDBP-203ENST00000439080 CTDSPL2Q05D32 466 aa20.12■□□□□ 0.81
TARDBP-203ENST00000439080 SREBF2Q12772 1141 aa20.12■□□□□ 0.81
TARDBP-203ENST00000439080 ANAPC4Q9UJX5 808 aa20.12■□□□□ 0.81
TARDBP-203ENST00000439080 USP17L5A8MUK1 530 aa20.11■□□□□ 0.81
TARDBP-203ENST00000439080 AKR1B1P15121 316 aa20.11■□□□□ 0.81
TARDBP-203ENST00000439080 GTF2A2P52657 109 aa20.11■□□□□ 0.81
TARDBP-203ENST00000439080 HAND2P61296 217 aa20.11■□□□□ 0.81
TARDBP-203ENST00000439080 MKNK2Q9HBH9 465 aa20.11■□□□□ 0.81
TARDBP-203ENST00000439080 KCNH4Q9UQ05 1017 aa20.11■□□□□ 0.81
TARDBP-203ENST00000439080 AFG3L2Q9Y4W6 797 aa20.11■□□□□ 0.81
TARDBP-203ENST00000439080 GTF3C3Q9Y5Q9 886 aa20.11■□□□□ 0.81
TARDBP-203ENST00000439080 TRIM75PA6NK02 468 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 PRDM1O75626 825 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 RASA1P20936 1047 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 PTH1RQ03431 593 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 PDE4BQ07343 736 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 SNAPC2Q13487 334 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 RAB3GAP1Q15042 981 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 REM2Q8IYK8 340 aaPredicted RBP20.1■□□□□ 0.81
TARDBP-203ENST00000439080 MS4A4AQ96JQ5 239 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 TBC1D2Q9BYX2 928 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 AS3MTQ9HBK9 375 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 ZNF287Q9HBT7 754 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 CABP5Q9NP86 173 aa20.1■□□□□ 0.81
TARDBP-203ENST00000439080 CCL15-CCL14A0A0B4J2E2 113 aa20.09■□□□□ 0.81
TARDBP-203ENST00000439080 MAP2K1Q02750 393 aaPredicted RBP20.09■□□□□ 0.81
TARDBP-203ENST00000439080 CCL15Q16663 113 aa20.09■□□□□ 0.81
TARDBP-203ENST00000439080 TMEM179Q6ZVK1 233 aa20.09■□□□□ 0.81
TARDBP-203ENST00000439080 ZNF280CQ8ND82 737 aa20.09■□□□□ 0.81
TARDBP-203ENST00000439080 CCDC17Q96LX7 622 aa20.09■□□□□ 0.81
TARDBP-203ENST00000439080 NBPF3Q9H094 633 aa20.09■□□□□ 0.81
TARDBP-203ENST00000439080 GUCY1A2P33402 732 aa20.08■□□□□ 0.81
TARDBP-203ENST00000439080 SEPT2Q15019 361 aa20.08■□□□□ 0.81
TARDBP-203ENST00000439080 TBC1D10CQ8IV04 446 aa20.08■□□□□ 0.81
TARDBP-203ENST00000439080 BRI3BPQ8WY22 251 aa20.08■□□□□ 0.81
TARDBP-203ENST00000439080 CTNNA3Q9UI47 895 aa20.08■□□□□ 0.81
TARDBP-203ENST00000439080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.08■□□□□ 0.81
TARDBP-203ENST00000439080 PLIN4Q96Q06 1357 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 A0A0G2JLL6 359 aaPredicted RBP20.08■□□□□ 0.8
TARDBP-203ENST00000439080 TESPA1A2RU30 521 aaPredicted RBP20.08■□□□□ 0.8
TARDBP-203ENST00000439080 CXCL11O14625 94 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 CETPP11597 493 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 TM4SF4P48230 202 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 SPP2Q13103 211 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 IMMTQ16891 758 aaKnown RBP20.08■□□□□ 0.8
TARDBP-203ENST00000439080 KIAA1211Q6ZU35 1233 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 PRRT2Q7Z6L0 340 aaPredicted RBP20.08■□□□□ 0.8
TARDBP-203ENST00000439080 CLEC10AQ8IUN9 316 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 WDR18Q9BV38 432 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 LSG1Q9H089 658 aaKnown RBP20.08■□□□□ 0.8
TARDBP-203ENST00000439080 ANO2Q9NQ90 1003 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 TACC3Q9Y6A5 838 aa20.08■□□□□ 0.8
TARDBP-203ENST00000439080 IGF2BP3O00425 579 aaKnown RBP eCLIP20.07■□□□□ 0.8
TARDBP-203ENST00000439080 ZNF213O14771 459 aa20.07■□□□□ 0.8
TARDBP-203ENST00000439080 MTMR2Q13614 643 aa20.07■□□□□ 0.8
TARDBP-203ENST00000439080 INCENPQ9NQS7 918 aa20.07■□□□□ 0.8
TARDBP-203ENST00000439080 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
TARDBP-203ENST00000439080 NEDD4P46934 1319 aa20.06■□□□□ 0.8
TARDBP-203ENST00000439080 INHBEP58166 350 aa20.06■□□□□ 0.8
TARDBP-203ENST00000439080 ICA1Q05084 483 aa20.06■□□□□ 0.8
TARDBP-203ENST00000439080 IFNL1Q8IU54 200 aa20.06■□□□□ 0.8
TARDBP-203ENST00000439080 ZNF444Q8N0Y2 327 aaPredicted RBP20.06■□□□□ 0.8
TARDBP-203ENST00000439080 STAG1Q8WVM7 1258 aa20.06■□□□□ 0.8
TARDBP-203ENST00000439080 PTPN18Q99952 460 aa20.06■□□□□ 0.8
TARDBP-203ENST00000439080 WBP1LQ9NX94 342 aa20.06■□□□□ 0.8
TARDBP-203ENST00000439080 ORC4O43929 436 aa20.05■□□□□ 0.8
TARDBP-203ENST00000439080 FGRP09769 529 aa20.05■□□□□ 0.8
TARDBP-203ENST00000439080 HSPA1AP0DMV8 641 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms