RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 G3BP1Q13283 466 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMGN1P6-201ENST00000438508 EPHA10Q5JZY3 1008 aa8.69□□□□□ -1.02
HMGN1P6-201ENST00000438508 C20orf204Q6ZNR8 217 aa8.69□□□□□ -1.02
HMGN1P6-201ENST00000438508 PLA2G12BQ9BX93 195 aa8.69□□□□□ -1.02
HMGN1P6-201ENST00000438508 CWC25Q9NXE8 425 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P6-201ENST00000438508 RNF114Q9Y508 228 aa8.69□□□□□ -1.02
HMGN1P6-201ENST00000438508 MYH14Q7Z406 1995 aaKnown RBP8.69□□□□□ -1.02
HMGN1P6-201ENST00000438508 TTC41PQ6P2S7 1318 aa8.69□□□□□ -1.02
HMGN1P6-201ENST00000438508 TJP1Q07157 1748 aa8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 APBB1O00213 710 aa8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 SASH1O94885 1247 aa8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 TAL1P17542 331 aaPredicted RBP8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 EIF5P55010 431 aaKnown RBP8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 HSP90AB3PQ58FF7 597 aa8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 SH3D19Q5HYK7 790 aa8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 CLASRPQ8N2M8 674 aaKnown RBP8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 USP26Q9BXU7 913 aa8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 MAP3K15Q6ZN16 1313 aa8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 RREB1Q92766 1687 aa8.68□□□□□ -1.02
HMGN1P6-201ENST00000438508 PCCAP05165 728 aaPredicted RBP8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 PTPN12Q05209 780 aaKnown RBP8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 BECN1Q14457 450 aa8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 ANKRD36CQ5JPF3 1778 aa8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 CASC1Q6TDU7 716 aa8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 UBE3BQ7Z3V4 1068 aa8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 PROCA1Q8NCQ7 364 aaPredicted RBP8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 IL27Q8NEV9 243 aa8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 PI4K2BQ8TCG2 481 aa8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 SNX21Q969T3 373 aa8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 C8orf37Q96NL8 207 aa8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 IL1RAPL2Q9NP60 686 aa8.67□□□□□ -1.02
HMGN1P6-201ENST00000438508 CDHR2Q9BYE9 1310 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 A0A0A0MRY4 1105 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 ERC2O15083 957 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 GLRX3O76003 335 aaKnown RBP8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 CSF1RP07333 972 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 SIK1P57059 783 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 TLR1Q15399 786 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 ARSJQ5FYB0 599 aaPredicted RBP8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 INTS5Q6P9B9 1019 aaKnown RBP8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 KIF6Q6ZMV9 814 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 C8orf86Q6ZUL3 223 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 ZNF34Q8IZ26 560 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 ZBTB38Q8NAP3 1195 aaPredicted RBP8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 IL17RAQ96F46 866 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 KIF2CQ99661 725 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 NIFKQ9BYG3 293 aaKnown RBP8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 KRTAP4-11Q9BYQ6 195 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 GPR108Q9NPR9 543 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 ZDHHC3Q9NYG2 299 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 USP21Q9UK80 565 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 PA2G4Q9UQ80 394 aaKnown RBP8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 CCDC9Q9Y3X0 531 aaKnown RBP8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 MYH3P11055 1940 aa8.66□□□□□ -1.02
HMGN1P6-201ENST00000438508 THSD7AQ9UPZ6 1657 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 REC8O95072 547 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 CHMLP26374 656 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 CD97P48960 835 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 TRAPPC3LQ5T215 181 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 LMBR1LQ6UX01 489 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 TICAM2Q86XR7 235 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 SYTL4Q96C24 671 aaPredicted RBP8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 EAF2Q96CJ1 260 aaPredicted RBP8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 GJD4Q96KN9 370 aaPredicted RBP8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 ZIC5Q96T25 663 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 ETNK1Q9HBU6 452 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 ECHDC1Q9NTX5 307 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 ZBTB1Q9Y2K1 713 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 SBF2Q86WG5 1849 aa8.65□□□□□ -1.02
HMGN1P6-201ENST00000438508 COL5A3P25940 1745 aaPredicted RBP8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 CIAO1O76071 339 aa8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 IFIT2P09913 472 aaKnown RBP8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 HSPA1LP34931 641 aa8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 OS9Q13438 667 aaPredicted RBP8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 HLFQ16534 295 aa8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 ILDR2Q71H61 639 aa8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 NLRP10Q86W26 655 aa8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 ACSBG1Q96GR2 724 aa8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 ANP32EQ9BTT0 268 aa8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 CCDC87Q9NVE4 849 aa8.64□□□□□ -1.03
HMGN1P6-201ENST00000438508 KCNQ2O43526 872 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 IL15P40933 162 aaPredicted RBP8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 CRKLP46109 303 aaKnown RBP8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 NR1H3Q13133 447 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 ITPK1Q13572 414 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 CLEC4GQ6UXB4 293 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 ERICH6Q7L0X2 663 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 ATG9AQ7Z3C6 839 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 ZNF295-AS1Q8N0V1 137 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 CNTROBQ8N137 903 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 JARID2Q92833 1246 aaPredicted RBP8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 AIDAQ96BJ3 306 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 GPATCH3Q96I76 525 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 TRPC5Q9UL62 973 aaPredicted RBP8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 ATRNO75882 1429 aa8.63□□□□□ -1.03
HMGN1P6-201ENST00000438508 PALLDQ8WX93 1383 aa8.62□□□□□ -1.03
HMGN1P6-201ENST00000438508 EYA2O00167 538 aa8.62□□□□□ -1.03
HMGN1P6-201ENST00000438508 ATP5JP18859 108 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms