RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 USP17L12C9JPN9 530 aa13.21□□□□□ -0.3
PDLIM5-206ENST00000437932 USP17L21D6R901 530 aa13.21□□□□□ -0.3
PDLIM5-206ENST00000437932 ZNF76P36508 570 aa13.21□□□□□ -0.3
PDLIM5-206ENST00000437932 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.3
PDLIM5-206ENST00000437932 NCBP1Q09161 790 aaKnown RBP13.21□□□□□ -0.3
PDLIM5-206ENST00000437932 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.3
PDLIM5-206ENST00000437932 NMT2O60551 498 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 WDHD1O75717 1129 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 IBSPP21815 317 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 CCDC43Q96MW1 224 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 SLF1Q9BQI6 1058 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 SRRTQ9BXP5 876 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 PPP2R2CQ9Y2T4 447 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.2□□□□□ -0.33e-6■■□□□ 11.9
PDLIM5-206ENST00000437932 ZSCAN10Q96SZ4 725 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 IMPACTQ9P2X3 320 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 EPSTI1Q96J88 318 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 CRACR2BQ8N4Y2 399 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 TTLL11Q8NHH1 800 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 TGFBRAP1Q8WUH2 860 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 NELFBQ8WX92 580 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 CDC25BP30305 580 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 SLC39A14Q15043 492 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 SUSD4Q5VX71 490 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 GPCPD1Q9NPB8 672 aa13.2□□□□□ -0.3
PDLIM5-206ENST00000437932 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 RNASE9P60153 205 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 DNAJC21Q5F1R6 531 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 POLR3EQ9NVU0 708 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 CTDP1Q9Y5B0 961 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 SOS2Q07890 1332 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 CTAGE15A4D2H0 777 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 PLEKHA8P1O95397 391 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 CTAGE8P0CG41 777 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 CTAGE6Q86UF2 777 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 CTAGE4Q8IX94 777 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 FMR1NBQ8N0W7 255 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
PDLIM5-206ENST00000437932 CCDC40Q4G0X9 1142 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 TOGARAM2Q6ZUX3 1019 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 DYMQ7RTS9 669 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 MB21D2Q8IYB1 491 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 DPF2Q92785 391 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 CEP89Q96ST8 783 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 ST7Q9NRC1 585 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 FMNL1O95466 1100 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 HIBADHP31937 336 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 DTHD1Q6ZMT9 781 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 TECPR2O15040 1411 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 TNNI2P48788 182 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 RBL2Q08999 1139 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 SMARCC2Q8TAQ2 1214 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 GTPBP4Q9BZE4 634 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 EXOSC10Q01780 885 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 FRMPD2Q68DX3 1309 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 CRACR2AQ9BSW2 395 aa13.18□□□□□ -0.3
PDLIM5-206ENST00000437932 MROH7-TTC4A0A0A0MT08 1334 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 LDHBP07195 334 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 SPECC1LQ69YQ0 1117 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 BCCIPQ9P287 314 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 GOLGA6L9A6NEM1 432 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 PTPROQ16827 1216 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 GIGYF2Q6Y7W6 1299 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 GPR108Q9NPR9 543 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 ATG3Q9NT62 314 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 BIN2Q9UBW5 565 aaPredicted RBP13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 BAG3O95817 575 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 TXKP42681 527 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 BRINP3Q76B58 766 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 TFAP4Q01664 338 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 TCERG1LQ5VWI1 586 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 IQUBQ8NA54 791 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 RMND1Q9NWS8 449 aa13.17□□□□□ -0.3
PDLIM5-206ENST00000437932 FEZ1Q99689 392 aa13.16□□□□□ -0.3
PDLIM5-206ENST00000437932 PAK1Q13153 545 aa13.16□□□□□ -0.3
PDLIM5-206ENST00000437932 TMEM266Q2M3C6 531 aa13.16□□□□□ -0.3
PDLIM5-206ENST00000437932 FBXO38Q6PIJ6 1188 aa13.16□□□□□ -0.3
PDLIM5-206ENST00000437932 TSG101Q99816 390 aa13.16□□□□□ -0.3
PDLIM5-206ENST00000437932 A0A1W2PQ27 194 aa13.16□□□□□ -0.3
PDLIM5-206ENST00000437932 A0A1W2PQ64 194 aa13.16□□□□□ -0.3
PDLIM5-206ENST00000437932 A0A1W2PQD8 194 aa13.16□□□□□ -0.3
PDLIM5-206ENST00000437932 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms