RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 LRRN4CLQ8ND94 238 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 SERTAD1Q9UHV2 236 aa11.95□□□□□ -0.5
CLSTN1-203ENST00000435891 TNKSO95271 1327 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 SERPINC1P01008 464 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 PTPREP23469 700 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■■□ 23.7
CLSTN1-203ENST00000435891 SEC23AQ15436 765 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 CFAP100Q494V2 611 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 NOM1Q5C9Z4 860 aaKnown RBP11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 TMX1Q9H3N1 280 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 CABP5Q9NP86 173 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 COL14A1Q05707 1796 aaKnown RBP11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 BAZ2BQ9UIF8 2168 aaKnown RBP11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 NID2Q14112 1375 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 MED15Q96RN5 788 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 VPS54Q9P1Q0 977 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 GNAT2P19087 354 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 KLRK1P26718 216 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 TPM4P67936 248 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 SART3Q15020 963 aaKnown RBP11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 ERFEQ4G0M1 354 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 TRMT44Q8IYL2 757 aaKnown RBP11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 CCDC150Q8NCX0 1101 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 RIOK1Q9BRS2 568 aaKnown RBP11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 KCND1Q9NSA2 647 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 MAN1B1Q9UKM7 699 aa11.94□□□□□ -0.5
CLSTN1-203ENST00000435891 PHLPP1O60346 1717 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 DEXIO95424 95 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 SAFBQ15424 915 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 PARP10Q53GL7 1025 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 SYT10Q6XYQ8 523 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 UBAC1Q9BSL1 405 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 CALCOCO1Q9P1Z2 691 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 ERICH2A1L162 156 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 FANCGO15287 622 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 ENAHQ8N8S7 591 aaPredicted RBP11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 FOXP1Q9H334 677 aaPredicted RBP11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 MYH2Q9UKX2 1941 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 A0A087X0B3 334 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 CASP1P29466 404 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 POSTNQ15063 836 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 PKN1Q16512 942 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 FEZ1Q99689 392 aa11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 BAZ2AQ9UIF9 1905 aaKnown RBP11.93□□□□□ -0.5
CLSTN1-203ENST00000435891 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 KIF18AQ8NI77 898 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 WASF1Q92558 559 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 CSRNP2Q9H175 543 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 ZNF804BA4D1E1 1349 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 RILPL1Q5EBL4 403 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 BICDL1Q6ZP65 573 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 SPATA31A1Q5TZJ5 1347 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 FUT2Q10981 343 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 SYCP1Q15431 976 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 ELF2Q15723 593 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 OLFM4Q6UX06 510 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 VSTM4Q8IW00 320 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 CELF1Q92879 486 aaKnown RBP11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 PLCH1Q4KWH8 1693 aa11.92□□□□□ -0.5
CLSTN1-203ENST00000435891 NMT2O60551 498 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 EPSTI1Q96J88 318 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 RTL9Q8NET4 1388 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 ACTN4O43707 911 aaKnown RBP11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 RNF41Q9H4P4 317 aaPredicted RBP11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 CACNA1SQ13698 1873 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 ADAMTS3O15072 1205 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 VEGFAP15692 232 aaPredicted RBP11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 SARSP49591 514 aaKnown RBP11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 KMT5BQ4FZB7 885 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 SLC51AQ86UW1 340 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 ESR2Q92731 530 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 FAM84BQ96KN1 310 aaPredicted RBP11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 NFE2L3Q9Y4A8 694 aa11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 SRPRBQ9Y5M8 271 aaKnown RBP11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 V9GY48 417 aaPredicted RBP11.91□□□□□ -0.5
CLSTN1-203ENST00000435891 PSDA5PKW4 1024 aaPredicted RBP11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 GABPB1Q06547 395 aaPredicted RBP11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 TMEM139Q8IV31 216 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 ZSCAN10Q96SZ4 725 aaPredicted RBP11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 SAMSN1Q9NSI8 373 aaKnown RBP11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 MINPP1Q9UNW1 487 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 JAG2Q9Y219 1238 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 CCDC196A0A1B0GTZ2 297 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 SLC4A8Q2Y0W8 1093 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 TMTC2Q8N394 836 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 ANAPC4Q9UJX5 808 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 TOP1P11387 765 aaKnown RBP11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 MORC3Q14149 939 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 PTF1AQ7RTS3 328 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 CDC5LQ99459 802 aaKnown RBP11.9□□□□□ -0.5
CLSTN1-203ENST00000435891 MYH6P13533 1939 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 USP17L12C9JPN9 530 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 USP17L21D6R901 530 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 TROAPQ12815 778 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms