RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 JAG1P78504 1218 aa22.03■■□□□ 1.12
HLA-F-220ENST00000434407 SBK1Q52WX2 424 aa22.03■■□□□ 1.12
HLA-F-220ENST00000434407 DDRGK1Q96HY6 314 aa22.03■■□□□ 1.12
HLA-F-220ENST00000434407 EPB41L4AQ9HCS5 686 aaPredicted RBP22.03■■□□□ 1.12
HLA-F-220ENST00000434407 ZHX2Q9Y6X8 837 aa22.03■■□□□ 1.12
HLA-F-220ENST00000434407 CCL15-CCL14A0A0B4J2E2 113 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 ALDH1A1P00352 501 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 CETPP11597 493 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 SDSP20132 328 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 MOGSQ13724 837 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 CCL15Q16663 113 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 ERICH6BQ5W0A0 696 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 FAM227BQ96M60 508 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 TBC1D2Q9BYX2 928 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 PRDM10Q9NQV6 1147 aa22.02■■□□□ 1.12
HLA-F-220ENST00000434407 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.02■■□□□ 1.12
HLA-F-220ENST00000434407 A0A0D9SFI3 127 aa22.01■■□□□ 1.11
HLA-F-220ENST00000434407 FOXP2O15409 715 aa22.01■■□□□ 1.11
HLA-F-220ENST00000434407 ASNSP08243 561 aa22.01■■□□□ 1.11
HLA-F-220ENST00000434407 ARPP21Q9UBL0 812 aaPredicted RBP22.01■■□□□ 1.11
HLA-F-220ENST00000434407 SWAP70Q9UH65 585 aa22.01■■□□□ 1.11
HLA-F-220ENST00000434407 CYP2D7A0A087X1C5 515 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 A0A0G2JLL6 359 aaPredicted RBP22■■□□□ 1.11
HLA-F-220ENST00000434407 USP17L5A8MUK1 530 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 SMIM22K7EJ46 135 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 LBX1P52954 281 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 NMIQ13287 307 aaPredicted RBP22■■□□□ 1.11
HLA-F-220ENST00000434407 SHROOM1Q2M3G4 852 aaPredicted RBP22■■□□□ 1.11
HLA-F-220ENST00000434407 MCMDC2Q4G0Z9 681 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 OTUD7BQ6GQQ9 843 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 CCDC129Q6ZRS4 1044 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 PRRT2Q7Z6L0 340 aaPredicted RBP22■■□□□ 1.11
HLA-F-220ENST00000434407 IFNL3Q8IZI9 196 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 CCDC136Q96JN2 1154 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 WDR18Q9BV38 432 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 ZCCHC17Q9NP64 241 aaKnown RBP22■■□□□ 1.11
HLA-F-220ENST00000434407 TSKSQ9UJT2 592 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 ZBTB21Q9ULJ3 1066 aa22■■□□□ 1.11
HLA-F-220ENST00000434407 GDF11O95390 407 aa21.99■■□□□ 1.11
HLA-F-220ENST00000434407 CERKLQ49MI3 558 aaPredicted RBP21.99■■□□□ 1.11
HLA-F-220ENST00000434407 C16orf86Q6ZW13 317 aa21.99■■□□□ 1.11
HLA-F-220ENST00000434407 CCDC84Q86UT8 332 aaPredicted RBP21.99■■□□□ 1.11
HLA-F-220ENST00000434407 AMOTL1Q8IY63 956 aa21.99■■□□□ 1.11
HLA-F-220ENST00000434407 DYNLL2Q96FJ2 89 aa21.99■■□□□ 1.11
HLA-F-220ENST00000434407 ROBO3Q96MS0 1386 aa21.99■■□□□ 1.11
HLA-F-220ENST00000434407 BTBD19C9JJ37 291 aa21.98■■□□□ 1.11
HLA-F-220ENST00000434407 HIP1O00291 1037 aa21.98■■□□□ 1.11
HLA-F-220ENST00000434407 NOM1Q5C9Z4 860 aaKnown RBP21.98■■□□□ 1.11
HLA-F-220ENST00000434407 FAM43AQ8N2R8 423 aa21.98■■□□□ 1.11
HLA-F-220ENST00000434407 ZNF280CQ8ND82 737 aa21.98■■□□□ 1.11
HLA-F-220ENST00000434407 LOC285556D6RIA3 1793 aa21.97■■□□□ 1.11
HLA-F-220ENST00000434407 GH2P01242 217 aa21.97■■□□□ 1.11
HLA-F-220ENST00000434407 CDK8P49336 464 aa21.97■■□□□ 1.11
HLA-F-220ENST00000434407 ALX1Q15699 326 aa21.97■■□□□ 1.11
HLA-F-220ENST00000434407 ZNF589Q86UQ0 364 aaPredicted RBP21.97■■□□□ 1.11
HLA-F-220ENST00000434407 SLC44A5Q8NCS7 719 aa21.97■■□□□ 1.11
HLA-F-220ENST00000434407 NACAP1Q9BZK3 213 aa21.97■■□□□ 1.11
HLA-F-220ENST00000434407 R3HDMLQ9H3Y0 253 aa21.97■■□□□ 1.11
HLA-F-220ENST00000434407 TBC1D8O95759 1140 aa21.96■■□□□ 1.11
HLA-F-220ENST00000434407 APPP05067 770 aa21.96■■□□□ 1.11
HLA-F-220ENST00000434407 GUCY1A2P33402 732 aa21.96■■□□□ 1.11
HLA-F-220ENST00000434407 TDO2P48775 406 aa21.96■■□□□ 1.11
HLA-F-220ENST00000434407 SPP2Q13103 211 aa21.96■■□□□ 1.11
HLA-F-220ENST00000434407 ABCB5Q2M3G0 1257 aa21.96■■□□□ 1.11
HLA-F-220ENST00000434407 GPAT2Q6NUI2 795 aa21.96■■□□□ 1.11
HLA-F-220ENST00000434407 ANKRD23Q86SG2 305 aa21.96■■□□□ 1.11
HLA-F-220ENST00000434407 AS3MTQ9HBK9 375 aa21.96■■□□□ 1.11
HLA-F-220ENST00000434407 TRIM75PA6NK02 468 aa21.95■■□□□ 1.1
HLA-F-220ENST00000434407 SH3D19Q5HYK7 790 aa21.95■■□□□ 1.1
HLA-F-220ENST00000434407 VPS53Q5VIR6 699 aa21.95■■□□□ 1.1
HLA-F-220ENST00000434407 FASTKD5Q7L8L6 764 aaKnown RBP21.95■■□□□ 1.1
HLA-F-220ENST00000434407 GREB1LQ9C091 1923 aaPredicted RBP21.95■■□□□ 1.1
HLA-F-220ENST00000434407 CCDC171Q6TFL3 1326 aa21.95■■□□□ 1.1
HLA-F-220ENST00000434407 CCDC17Q96LX7 622 aa21.94■■□□□ 1.1
HLA-F-220ENST00000434407 NAPBQ9H115 298 aa21.94■■□□□ 1.1
HLA-F-220ENST00000434407 CABP5Q9NP86 173 aa21.94■■□□□ 1.1
HLA-F-220ENST00000434407 DIAPH3Q9NSV4 1193 aa21.94■■□□□ 1.1
HLA-F-220ENST00000434407 MINDY4BA8MYZ0 360 aa21.93■■□□□ 1.1
HLA-F-220ENST00000434407 ZMYM6O95789 1325 aa21.93■■□□□ 1.1
HLA-F-220ENST00000434407 HSPD1P10809 573 aaKnown RBP21.93■■□□□ 1.1
HLA-F-220ENST00000434407 MFAP1P55081 439 aaKnown RBP21.93■■□□□ 1.1
HLA-F-220ENST00000434407 BACE1P56817 501 aa21.93■■□□□ 1.1
HLA-F-220ENST00000434407 CRHR2Q13324 411 aa21.93■■□□□ 1.1
HLA-F-220ENST00000434407 CWC27Q6UX04 472 aaKnown RBP21.93■■□□□ 1.1
HLA-F-220ENST00000434407 PROCA1Q8NCQ7 364 aaPredicted RBP21.93■■□□□ 1.1
HLA-F-220ENST00000434407 PPP4R2Q9NY27 417 aa21.93■■□□□ 1.1
HLA-F-220ENST00000434407 SLC45A1Q9Y2W3 748 aa21.93■■□□□ 1.1
HLA-F-220ENST00000434407 GPR25O00155 361 aa21.92■■□□□ 1.1
HLA-F-220ENST00000434407 TAF1CQ15572 869 aaPredicted RBP21.92■■□□□ 1.1
HLA-F-220ENST00000434407 C19orf81C9J6K1 198 aa21.91■■□□□ 1.1
HLA-F-220ENST00000434407 USP17L10C9JJH3 530 aa21.91■■□□□ 1.1
HLA-F-220ENST00000434407 PDHXO00330 501 aa21.91■■□□□ 1.1
HLA-F-220ENST00000434407 AKR1B1P15121 316 aa21.91■■□□□ 1.1
HLA-F-220ENST00000434407 SEPT2Q15019 361 aa21.91■■□□□ 1.1
HLA-F-220ENST00000434407 COL13A1Q5TAT6 717 aaPredicted RBP21.91■■□□□ 1.1
HLA-F-220ENST00000434407 TMEM179Q6ZVK1 233 aa21.91■■□□□ 1.1
HLA-F-220ENST00000434407 SKAP1Q86WV1 359 aa21.91■■□□□ 1.1
HLA-F-220ENST00000434407 ANAPC4Q9UJX5 808 aa21.91■■□□□ 1.1
HLA-F-220ENST00000434407 FGAP02671 866 aa21.9■■□□□ 1.1
HLA-F-220ENST00000434407 RASA1P20936 1047 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms