RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 AK5Q9Y6K8 562 aa7.38□□□□□ -1.23
PTPN4-205ENST00000433888 CAPN6Q9Y6Q1 641 aa7.38□□□□□ -1.23
PTPN4-205ENST00000433888 DBX1A6NMT0 343 aa7.37□□□□□ -1.23
PTPN4-205ENST00000433888 CST3P01034 146 aaPredicted RBP7.37□□□□□ -1.23
PTPN4-205ENST00000433888 EIF4BP23588 611 aaKnown RBP7.37□□□□□ -1.23
PTPN4-205ENST00000433888 HID1Q8IV36 788 aa7.37□□□□□ -1.23
PTPN4-205ENST00000433888 MIPEPQ99797 713 aa7.37□□□□□ -1.23
PTPN4-205ENST00000433888 FGD1P98174 961 aa7.36□□□□□ -1.23
PTPN4-205ENST00000433888 CDKAL1Q5VV42 579 aa7.36□□□□□ -1.23
PTPN4-205ENST00000433888 LETMD1Q6P1Q0 360 aa7.36□□□□□ -1.23
PTPN4-205ENST00000433888 AGMOQ6ZNB7 445 aa7.36□□□□□ -1.23
PTPN4-205ENST00000433888 CILP2Q8IUL8 1156 aa7.36□□□□□ -1.23
PTPN4-205ENST00000433888 MFSD4AQ8N468 514 aa7.36□□□□□ -1.23
PTPN4-205ENST00000433888 KRTAP4-7Q9BYR0 210 aa7.36□□□□□ -1.23
PTPN4-205ENST00000433888 CARS2Q9HA77 564 aaKnown RBP7.36□□□□□ -1.23
PTPN4-205ENST00000433888 TACC3Q9Y6A5 838 aa7.36□□□□□ -1.23
PTPN4-205ENST00000433888 PRPF40AO75400 957 aaKnown RBP7.35□□□□□ -1.23
PTPN4-205ENST00000433888 GRK4P32298 578 aa7.35□□□□□ -1.23
PTPN4-205ENST00000433888 ETF1P62495 437 aaKnown RBP7.35□□□□□ -1.23
PTPN4-205ENST00000433888 SEPT6Q14141 434 aa7.35□□□□□ -1.23
PTPN4-205ENST00000433888 KCNMB1Q16558 191 aa7.35□□□□□ -1.23
PTPN4-205ENST00000433888 PRAMEF13Q5VWM6 474 aa7.35□□□□□ -1.23
PTPN4-205ENST00000433888 NPAS4Q8IUM7 802 aa7.35□□□□□ -1.23
PTPN4-205ENST00000433888 FAM84AQ96KN4 292 aa7.35□□□□□ -1.23
PTPN4-205ENST00000433888 TRAIPQ9BWF2 469 aa7.35□□□□□ -1.23
PTPN4-205ENST00000433888 FAM53CQ9NYF3 392 aa7.35□□□□□ -1.23
PTPN4-205ENST00000433888 TPX2Q9ULW0 747 aaKnown RBP7.35□□□□□ -1.23
PTPN4-205ENST00000433888 LRRC10BA6NIK2 292 aa7.34□□□□□ -1.23
PTPN4-205ENST00000433888 AFMP43652 599 aa7.34□□□□□ -1.23
PTPN4-205ENST00000433888 CCDC85BQ15834 202 aaPredicted RBP7.34□□□□□ -1.23
PTPN4-205ENST00000433888 BHLHE22Q8NFJ8 381 aaPredicted RBP7.34□□□□□ -1.23
PTPN4-205ENST00000433888 FAM155AB1AL88 458 aaPredicted RBP7.33□□□□□ -1.24
PTPN4-205ENST00000433888 H3BS24 57 aa7.33□□□□□ -1.24
PTPN4-205ENST00000433888 LIG3P49916 1009 aa7.33□□□□□ -1.24
PTPN4-205ENST00000433888 THAP5Q7Z6K1 395 aa7.33□□□□□ -1.24
PTPN4-205ENST00000433888 KSR1Q8IVT5 923 aa7.33□□□□□ -1.24
PTPN4-205ENST00000433888 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
PTPN4-205ENST00000433888 LIN37Q96GY3 246 aaPredicted RBP7.33□□□□□ -1.24
PTPN4-205ENST00000433888 TJP2Q9UDY2 1190 aa7.33□□□□□ -1.24
PTPN4-205ENST00000433888 GLI1P08151 1106 aa7.32□□□□□ -1.24
PTPN4-205ENST00000433888 TFE3P19532 575 aaPredicted RBP7.32□□□□□ -1.24
PTPN4-205ENST00000433888 GDNFP39905 211 aa7.32□□□□□ -1.24
PTPN4-205ENST00000433888 TNK2Q07912 1038 aa7.32□□□□□ -1.24
PTPN4-205ENST00000433888 MLANAQ16655 118 aa7.32□□□□□ -1.24
PTPN4-205ENST00000433888 SPOCD1Q6ZMY3 1216 aa7.32□□□□□ -1.24
PTPN4-205ENST00000433888 CDH24Q86UP0 819 aa7.32□□□□□ -1.24
PTPN4-205ENST00000433888 DUSP9Q99956 384 aaKnown RBP7.32□□□□□ -1.24
PTPN4-205ENST00000433888 CBX7O95931 251 aa7.31□□□□□ -1.24
PTPN4-205ENST00000433888 KIR3DL1P43629 444 aa7.31□□□□□ -1.24
PTPN4-205ENST00000433888 LCE4AQ5TA78 99 aa7.31□□□□□ -1.24
PTPN4-205ENST00000433888 MEI1Q5TIA1 1274 aa7.31□□□□□ -1.24
PTPN4-205ENST00000433888 ZNF746Q6NUN9 644 aaPredicted RBP7.31□□□□□ -1.24
PTPN4-205ENST00000433888 XAGE3Q8WTP9 111 aa7.31□□□□□ -1.24
PTPN4-205ENST00000433888 UBE2FQ969M7 185 aa7.31□□□□□ -1.24
PTPN4-205ENST00000433888 COX4I2Q96KJ9 171 aa7.31□□□□□ -1.24
PTPN4-205ENST00000433888 SLC38A3Q99624 504 aa7.31□□□□□ -1.24
PTPN4-205ENST00000433888 SLC6A19Q695T7 634 aa7.3□□□□□ -1.24
PTPN4-205ENST00000433888 MCATQ8IVS2 390 aaKnown RBP7.3□□□□□ -1.24
PTPN4-205ENST00000433888 KIRREL1Q96J84 757 aa7.3□□□□□ -1.24
PTPN4-205ENST00000433888 TMEM87BQ96K49 555 aa7.3□□□□□ -1.24
PTPN4-205ENST00000433888 ESR1P03372 595 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 PGRP06401 933 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 CYP7A1P22680 504 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 PKN1Q16512 942 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 MAP3K11Q16584 847 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 PRR23BQ6ZRT6 265 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 DNAJB8Q8NHS0 232 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 ACSF2Q96CM8 615 aaPredicted RBP7.29□□□□□ -1.24
PTPN4-205ENST00000433888 Q96M66 194 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 ALPK1Q96QP1 1244 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 DPH2Q9BQC3 489 aaPredicted RBP7.29□□□□□ -1.24
PTPN4-205ENST00000433888 ZSWIM5Q9P217 1185 aa7.29□□□□□ -1.24
PTPN4-205ENST00000433888 ANKRD33BA6NCL7 494 aa7.28□□□□□ -1.24
PTPN4-205ENST00000433888 KRT1P04264 644 aa7.28□□□□□ -1.24
PTPN4-205ENST00000433888 RPL6Q02878 288 aaKnown RBP7.28□□□□□ -1.24
PTPN4-205ENST00000433888 TSNAXIP1Q2TAA8 658 aa7.28□□□□□ -1.24
PTPN4-205ENST00000433888 FBLN7Q53RD9 439 aa7.28□□□□□ -1.24
PTPN4-205ENST00000433888 EAPPQ56P03 285 aaPredicted RBP7.28□□□□□ -1.24
PTPN4-205ENST00000433888 TMEM67Q5HYA8 995 aa7.28□□□□□ -1.24
PTPN4-205ENST00000433888 PIWIL2Q8TC59 973 aaKnown RBP7.28□□□□□ -1.24
PTPN4-205ENST00000433888 PPP1R13LQ8WUF5 828 aa7.28□□□□□ -1.24
PTPN4-205ENST00000433888 MIR1-1HGQ9H1L0 117 aa7.28□□□□□ -1.24
PTPN4-205ENST00000433888 DUSP15Q9H1R2 295 aaPredicted RBP7.28□□□□□ -1.24
PTPN4-205ENST00000433888 TLR6Q9Y2C9 796 aa7.28□□□□□ -1.24
PTPN4-205ENST00000433888 WASH4PA8MWX3 477 aa7.27□□□□□ -1.25
PTPN4-205ENST00000433888 PATL2C9JE40 543 aaKnown RBP7.27□□□□□ -1.25
PTPN4-205ENST00000433888 CTSHP09668 335 aa7.27□□□□□ -1.25
PTPN4-205ENST00000433888 DAB2P98082 770 aa7.27□□□□□ -1.25
PTPN4-205ENST00000433888 PHC3Q8NDX5 983 aa7.27□□□□□ -1.25
PTPN4-205ENST00000433888 NOC4LQ9BVI4 516 aaKnown RBP7.27□□□□□ -1.25
PTPN4-205ENST00000433888 PARP2Q9UGN5 583 aa7.27□□□□□ -1.25
PTPN4-205ENST00000433888 ADAM30Q9UKF2 790 aa7.27□□□□□ -1.25
PTPN4-205ENST00000433888 CEP131Q9UPN4 1083 aa7.27□□□□□ -1.25
PTPN4-205ENST00000433888 USP31Q70CQ4 1352 aa7.26□□□□□ -1.25
PTPN4-205ENST00000433888 SRFP11831 508 aa7.26□□□□□ -1.25
PTPN4-205ENST00000433888 LMNB1P20700 586 aa7.26□□□□□ -1.25
PTPN4-205ENST00000433888 RALGPS1Q5JS13 557 aa7.26□□□□□ -1.25
PTPN4-205ENST00000433888 TMPRSS7Q7RTY8 843 aa7.26□□□□□ -1.25
PTPN4-205ENST00000433888 CCDC120Q96HB5 630 aa7.26□□□□□ -1.25
PTPN4-205ENST00000433888 DNAJC25-GNG10A0A024R161 153 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms