RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 GOLGA8DPQ0D2H9 430 aa12.09□□□□□ -0.47
SMPD4-206ENST00000433118 METTL16Q86W50 562 aaKnown RBP12.09□□□□□ -0.47
SMPD4-206ENST00000433118 LRRN4CLQ8ND94 238 aa12.09□□□□□ -0.47
SMPD4-206ENST00000433118 ZKSCAN3Q9BRR0 538 aa12.09□□□□□ -0.47
SMPD4-206ENST00000433118 NYXQ9GZU5 481 aa12.09□□□□□ -0.47
SMPD4-206ENST00000433118 EPB41L4AQ9HCS5 686 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-206ENST00000433118 FANCLQ9NW38 375 aa12.09□□□□□ -0.47
SMPD4-206ENST00000433118 SLC12A7Q9Y666 1083 aa12.09□□□□□ -0.47
SMPD4-206ENST00000433118 SLC4A4Q9Y6R1 1079 aa12.09□□□□□ -0.47
SMPD4-206ENST00000433118 IFIT3O14879 490 aaKnown RBP12.08□□□□□ -0.48
SMPD4-206ENST00000433118 CUTAO60888 179 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 TDO2P48775 406 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 ETF1P62495 437 aaKnown RBP12.08□□□□□ -0.48
SMPD4-206ENST00000433118 SSRP1Q08945 709 aaKnown RBP12.08□□□□□ -0.48
SMPD4-206ENST00000433118 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 KRBA2Q6ZNG9 492 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 ZNF512BQ96KM6 892 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-206ENST00000433118 FAM84BQ96KN1 310 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-206ENST00000433118 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMPD4-206ENST00000433118 ANKIB1Q9P2G1 1089 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 PCDHA5Q9Y5H7 936 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMPD4-206ENST00000433118 MINDY4BA8MYZ0 360 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 TUBB4AP04350 444 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 KRT27Q7Z3Y8 459 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 CNBD1Q8NA66 436 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 IGDCC4Q8TDY8 1250 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 LY9Q9HBG7 655 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 TMEM232C9JQI7 657 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 NTRK3Q16288 839 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 VSTM4Q8IW00 320 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 IFNL3Q8IZI9 196 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 RGS22Q8NE09 1264 aa12.08□□□□□ -0.48
SMPD4-206ENST00000433118 DYNLL1P63167 89 aaKnown RBP12.07□□□□□ -0.48
SMPD4-206ENST00000433118 FAM177A1Q8N128 213 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-206ENST00000433118 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
SMPD4-206ENST00000433118 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.07□□□□□ -0.48
SMPD4-206ENST00000433118 HOOK1Q9UJC3 728 aaKnown RBP12.07□□□□□ -0.48
SMPD4-206ENST00000433118 ATRNO75882 1429 aa12.07□□□□□ -0.48
SMPD4-206ENST00000433118 FOXN1O15353 648 aa12.07□□□□□ -0.48
SMPD4-206ENST00000433118 SAFBQ15424 915 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMPD4-206ENST00000433118 ARHGAP29Q52LW3 1261 aa12.07□□□□□ -0.48
SMPD4-206ENST00000433118 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
SMPD4-206ENST00000433118 NOSTRINQ8IVI9 506 aa12.07□□□□□ -0.48
SMPD4-206ENST00000433118 CCDC82Q8N4S0 544 aa12.07□□□□□ -0.48
SMPD4-206ENST00000433118 PDILTQ8N807 584 aa12.07□□□□□ -0.48
SMPD4-206ENST00000433118 ECM29Q5VYK3 1845 aa12.07□□□□□ -0.48
SMPD4-206ENST00000433118 COL5A3P25940 1745 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-206ENST00000433118 CYP2D7A0A087X1C5 515 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 BTBD18B2RXH4 712 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 URI1O94763 535 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-206ENST00000433118 SGMS1Q86VZ5 419 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 FOXP4Q8IVH2 680 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-206ENST00000433118 MNS1Q8NEH6 495 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 FAM217BQ9NTX9 383 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-206ENST00000433118 ZSWIM5Q9P217 1185 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 PHLPP2Q6ZVD8 1323 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 FAM237AA0A1B0GTK4 181 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 CDK11BP21127 795 aaKnown RBP12.06□□□□□ -0.48
SMPD4-206ENST00000433118 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
SMPD4-206ENST00000433118 ZNF446Q9NWS9 450 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 GSG1L2A8MUP6 293 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 PDE4BQ07343 736 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 SLC10A5Q5PT55 438 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 WASF1Q92558 559 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 UBXN4Q92575 508 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 KCNJ14Q9UNX9 436 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
SMPD4-206ENST00000433118 ZSCAN12O43309 604 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 ATP2B1P20020 1258 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 PRDX5P30044 214 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 EVX2Q03828 476 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 UBE4AQ14139 1066 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 DIS3L2Q8IYB7 885 aaKnown RBP12.05□□□□□ -0.48
SMPD4-206ENST00000433118 TRIM22Q8IYM9 498 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
SMPD4-206ENST00000433118 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-206ENST00000433118 FMNL1O95466 1100 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-206ENST00000433118 TM4SF1P30408 202 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 GUCY1A2P33402 732 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 LIFRP42702 1097 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 MFSD6Q6ZSS7 791 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 RTL9Q8NET4 1388 aa12.05□□□□□ -0.48
SMPD4-206ENST00000433118 POLR2DO15514 142 aaKnown RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 ARHGAP6O43182 974 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 PRDM1O75626 825 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 MMP1P03956 469 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 SLFN14P0C7P3 912 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 H2AFXP16104 143 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 BMP6P22004 513 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 CLCN6P51797 869 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 BMS1Q14692 1282 aaKnown RBP12.04□□□□□ -0.48
SMPD4-206ENST00000433118 POSTNQ15063 836 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 TERF2Q15554 542 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 PRR5LQ6MZQ0 368 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 TMX1Q9H3N1 280 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 STK36Q9NRP7 1315 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 SRCAPQ6ZRS2 3230 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 MYO1BO43795 1136 aa12.04□□□□□ -0.48
SMPD4-206ENST00000433118 GYS1P13807 737 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms