RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 PTPRFP10586 1907 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 SZT2Q5T011 3432 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 CYP2E1P05181 493 aaPredicted RBP21.49■■□□□ 1.03
CNOT9-204ENST00000432877 CYP2B6P20813 491 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 ATP8B2P98198 1209 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 GPR153Q6NV75 609 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 TMED8Q6PL24 325 aaPredicted RBP21.49■■□□□ 1.03
CNOT9-204ENST00000432877 MAPKAPK5Q8IW41 473 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 SSH3Q8TE77 659 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 DIS3LQ8TF46 1054 aaKnown RBP21.49■■□□□ 1.03
CNOT9-204ENST00000432877 FRAT1Q92837 279 aaPredicted RBP21.49■■□□□ 1.03
CNOT9-204ENST00000432877 GDF15Q99988 308 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 C11orf49Q9H6J7 331 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 SNRKQ9NRH2 765 aa21.49■■□□□ 1.03
CNOT9-204ENST00000432877 OS9Q13438 667 aaPredicted RBP21.48■■□□□ 1.03
CNOT9-204ENST00000432877 PDE3AQ14432 1141 aa21.48■■□□□ 1.03
CNOT9-204ENST00000432877 CCAR1Q8IX12 1150 aaKnown RBP21.48■■□□□ 1.03
CNOT9-204ENST00000432877 TRIB2Q92519 343 aa21.48■■□□□ 1.03
CNOT9-204ENST00000432877 PALD1Q9ULE6 856 aa21.48■■□□□ 1.03
CNOT9-204ENST00000432877 BCAR3O75815 825 aa21.47■■□□□ 1.03
CNOT9-204ENST00000432877 MNX1P50219 401 aaPredicted RBP21.47■■□□□ 1.03
CNOT9-204ENST00000432877 TRIM32Q13049 653 aa21.47■■□□□ 1.03
CNOT9-204ENST00000432877 USP17L2Q6R6M4 530 aa21.47■■□□□ 1.03
CNOT9-204ENST00000432877 CLUAP1Q96AJ1 413 aa21.47■■□□□ 1.03
CNOT9-204ENST00000432877 DBNDD2Q9BQY9 259 aa21.47■■□□□ 1.03
CNOT9-204ENST00000432877 DNAJC18Q9H819 358 aa21.47■■□□□ 1.03
CNOT9-204ENST00000432877 RBPJLQ9UBG7 517 aa21.47■■□□□ 1.03
CNOT9-204ENST00000432877 ZBTB21Q9ULJ3 1066 aa21.47■■□□□ 1.03
CNOT9-204ENST00000432877 SURF6O75683 361 aaKnown RBP21.46■■□□□ 1.03
CNOT9-204ENST00000432877 PRKAR2AP13861 404 aaKnown RBP21.46■■□□□ 1.03
CNOT9-204ENST00000432877 ERVK-9P63128 1117 aa21.46■■□□□ 1.03
CNOT9-204ENST00000432877 ERVK-24P63145 666 aa21.46■■□□□ 1.03
CNOT9-204ENST00000432877 JAG1P78504 1218 aa21.46■■□□□ 1.03
CNOT9-204ENST00000432877 ZKSCAN2Q63HK3 967 aa21.46■■□□□ 1.03
CNOT9-204ENST00000432877 C7orf61Q8IZ16 206 aa21.46■■□□□ 1.03
CNOT9-204ENST00000432877 USP6NLQ92738 828 aa21.46■■□□□ 1.03
CNOT9-204ENST00000432877 TXNRD2Q9NNW7 524 aa21.46■■□□□ 1.03
CNOT9-204ENST00000432877 ZKSCAN1P17029 563 aaPredicted RBP21.45■■□□□ 1.02
CNOT9-204ENST00000432877 RGS2P41220 211 aa21.45■■□□□ 1.02
CNOT9-204ENST00000432877 ADGRA1Q86SQ6 560 aa21.45■■□□□ 1.02
CNOT9-204ENST00000432877 NOP58Q9Y2X3 529 aaKnown RBP21.45■■□□□ 1.02
CNOT9-204ENST00000432877 LOC285556D6RIA3 1793 aa21.45■■□□□ 1.02
CNOT9-204ENST00000432877 SOX1O00570 391 aaPredicted RBP21.44■■□□□ 1.02
CNOT9-204ENST00000432877 GDF11O95390 407 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 ZAP70P43403 619 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 Q3C1V9 767 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 MORN1Q5T089 497 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 PLEKHH3Q7Z736 793 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 TMEM57Q8N5G2 664 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 SLC17A8Q8NDX2 589 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 C12orf42Q96LP6 360 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 EMILIN3Q9NT22 766 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 RABGAP1Q9Y3P9 1069 aa21.44■■□□□ 1.02
CNOT9-204ENST00000432877 GLRX3O76003 335 aaKnown RBP21.43■■□□□ 1.02
CNOT9-204ENST00000432877 CYP7A1P22680 504 aa21.43■■□□□ 1.02
CNOT9-204ENST00000432877 USP14P54578 494 aa21.43■■□□□ 1.02
CNOT9-204ENST00000432877 CCNA1P78396 465 aa21.43■■□□□ 1.02
CNOT9-204ENST00000432877 LRIT3Q3SXY7 679 aa21.43■■□□□ 1.02
CNOT9-204ENST00000432877 TATDN1Q6P1N9 297 aa21.43■■□□□ 1.02
CNOT9-204ENST00000432877 GPR142Q7Z601 462 aa21.43■■□□□ 1.02
CNOT9-204ENST00000432877 ZMYND8Q9ULU4 1186 aaPredicted RBP21.43■■□□□ 1.02
CNOT9-204ENST00000432877 TNNQ9UQP3 1299 aa21.43■■□□□ 1.02
CNOT9-204ENST00000432877 USP17L15C9J2P7 530 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 USP17L13C9JLJ4 530 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 USP17L11C9JVI0 530 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 USP17L18D6R9N7 530 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 USP17L22D6RA61 530 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 USP17L17D6RBQ6 530 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 USP17L19D6RCP7 530 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 USP17L20D6RJB6 530 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 CACNB2Q08289 660 aaPredicted RBP21.42■■□□□ 1.02
CNOT9-204ENST00000432877 USP17L24Q0WX57 530 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 DOCK3Q8IZD9 2030 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 LRCH3Q96II8 777 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 EHD4Q9H223 541 aa21.42■■□□□ 1.02
CNOT9-204ENST00000432877 PIH1D3Q9NQM4 214 aaKnown RBP21.42■■□□□ 1.02
CNOT9-204ENST00000432877 SAP30BPQ9UHR5 308 aaKnown RBP21.42■■□□□ 1.02
CNOT9-204ENST00000432877 GH2P01242 217 aa21.41■■□□□ 1.02
CNOT9-204ENST00000432877 USP5P45974 858 aa21.41■■□□□ 1.02
CNOT9-204ENST00000432877 TTC6Q86TZ1 520 aa21.41■■□□□ 1.02
CNOT9-204ENST00000432877 APBA2Q99767 749 aa21.41■■□□□ 1.02
CNOT9-204ENST00000432877 CWC22Q9HCG8 908 aaKnown RBP21.41■■□□□ 1.02
CNOT9-204ENST00000432877 SERPINB13Q9UIV8 391 aa21.41■■□□□ 1.02
CNOT9-204ENST00000432877 DBNLQ9UJU6 430 aaKnown RBP21.41■■□□□ 1.02
CNOT9-204ENST00000432877 COL6A1P12109 1028 aa21.4■■□□□ 1.02
CNOT9-204ENST00000432877 DYNLL1P63167 89 aaKnown RBP21.4■■□□□ 1.02
CNOT9-204ENST00000432877 LHX8Q68G74 356 aa21.4■■□□□ 1.02
CNOT9-204ENST00000432877 EDC3Q96F86 508 aaKnown RBP21.4■■□□□ 1.02
CNOT9-204ENST00000432877 PAGR1Q9BTK6 254 aa21.4■■□□□ 1.02
CNOT9-204ENST00000432877 PORCNQ9H237 461 aa21.4■■□□□ 1.02
CNOT9-204ENST00000432877 PEX10O60683 326 aa21.39■■□□□ 1.01
CNOT9-204ENST00000432877 IDH1O75874 414 aaKnown RBP21.39■■□□□ 1.01
CNOT9-204ENST00000432877 MAGEA10P43363 369 aaPredicted RBP21.39■■□□□ 1.01
CNOT9-204ENST00000432877 MAP3K12Q12852 859 aa21.39■■□□□ 1.01
CNOT9-204ENST00000432877 MAP2K5Q13163 448 aa21.39■■□□□ 1.01
CNOT9-204ENST00000432877 SHROOM1Q2M3G4 852 aaPredicted RBP21.39■■□□□ 1.01
CNOT9-204ENST00000432877 CERKLQ49MI3 558 aaPredicted RBP21.39■■□□□ 1.01
CNOT9-204ENST00000432877 LBX2Q6XYB7 198 aa21.39■■□□□ 1.01
CNOT9-204ENST00000432877 CATSPERGQ6ZRH7 1159 aa21.39■■□□□ 1.01
CNOT9-204ENST00000432877 TDHQ8IZJ6 230 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms