RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 GPR142Q7Z601 462 aa10.02□□□□□ -0.81
CSTF1-203ENST00000428552 ZGPATQ8N5A5 531 aaKnown RBP10.02□□□□□ -0.81
CSTF1-203ENST00000428552 GPRC5AQ8NFJ5 357 aa10.02□□□□□ -0.81
CSTF1-203ENST00000428552 MAFAQ8NHW3 353 aaPredicted RBP10.02□□□□□ -0.81
CSTF1-203ENST00000428552 CEP126Q9P2H0 1117 aa10.02□□□□□ -0.81
CSTF1-203ENST00000428552 ABCF2Q9UG63 623 aa10.02□□□□□ -0.81
CSTF1-203ENST00000428552 PTPRCP08575 1304 aa10.02□□□□□ -0.81
CSTF1-203ENST00000428552 ZNF521Q96K83 1311 aa10.02□□□□□ -0.81
CSTF1-203ENST00000428552 TTC28Q96AY4 2481 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 MAPK4P31152 587 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 TIMM10P62072 90 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 ERVK-9P63128 1117 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 ERVK-24P63145 666 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 PI16Q6UXB8 463 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 METTL16Q86W50 562 aaKnown RBP10.01□□□□□ -0.81
CSTF1-203ENST00000428552 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
CSTF1-203ENST00000428552 TRPV1Q8NER1 839 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 MYLIPQ8WY64 445 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 SSH1Q8WYL5 1049 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 NSUN4Q96CB9 384 aaKnown RBP10.01□□□□□ -0.81
CSTF1-203ENST00000428552 APBA2Q99767 749 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 SENP6Q9GZR1 1112 aaPredicted RBP10.01□□□□□ -0.81
CSTF1-203ENST00000428552 RLFQ13129 1914 aa10.01□□□□□ -0.81
CSTF1-203ENST00000428552 IL15P40933 162 aaPredicted RBP10□□□□□ -0.81
CSTF1-203ENST00000428552 RGS2P41220 211 aa10□□□□□ -0.81
CSTF1-203ENST00000428552 ATN1P54259 1190 aaPredicted RBP10□□□□□ -0.81
CSTF1-203ENST00000428552 IRX3P78415 501 aaPredicted RBP10□□□□□ -0.81
CSTF1-203ENST00000428552 TBC1D9Q6ZT07 1266 aa10□□□□□ -0.81
CSTF1-203ENST00000428552 PLEKHH3Q7Z736 793 aa10□□□□□ -0.81
CSTF1-203ENST00000428552 SLF2Q8IX21 1173 aa10□□□□□ -0.81
CSTF1-203ENST00000428552 EMILIN3Q9NT22 766 aa10□□□□□ -0.81
CSTF1-203ENST00000428552 HMG20BQ9P0W2 317 aa10□□□□□ -0.81
CSTF1-203ENST00000428552 RTP1P59025 263 aa9.99□□□□□ -0.81
CSTF1-203ENST00000428552 MAP2K5Q13163 448 aa9.99□□□□□ -0.81
CSTF1-203ENST00000428552 PDE3AQ14432 1141 aa9.99□□□□□ -0.81
CSTF1-203ENST00000428552 SPTY2D1Q68D10 685 aaPredicted RBP9.99□□□□□ -0.81
CSTF1-203ENST00000428552 SH3RF3Q8TEJ3 882 aaPredicted RBP9.99□□□□□ -0.81
CSTF1-203ENST00000428552 XAGE2Q96GT9 111 aa9.99□□□□□ -0.81
CSTF1-203ENST00000428552 LBHD1Q9BQE6 289 aaPredicted RBP9.99□□□□□ -0.81
CSTF1-203ENST00000428552 AS3MTQ9HBK9 375 aa9.99□□□□□ -0.81
CSTF1-203ENST00000428552 COPRSQ9NQ92 184 aa9.99□□□□□ -0.81
CSTF1-203ENST00000428552 DDX20Q9UHI6 824 aaKnown RBP9.99□□□□□ -0.81
CSTF1-203ENST00000428552 HERC5Q9UII4 1024 aaKnown RBP9.99□□□□□ -0.81
CSTF1-203ENST00000428552 CDK5RAP2Q96SN8 1893 aa9.99□□□□□ -0.81
CSTF1-203ENST00000428552 A0A1B0GUL7 405 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 C19orf81C9J6K1 198 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 DNM1LO00429 736 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 MAP4K4O95819 1239 aaPredicted RBP9.98□□□□□ -0.81
CSTF1-203ENST00000428552 HOXC6P09630 235 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
CSTF1-203ENST00000428552 SNX17Q15036 470 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 SH3RF1Q7Z6J0 888 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 USP38Q8NB14 1042 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 NPLOC4Q8TAT6 608 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 LPAR1Q92633 364 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 PAGR1Q9BTK6 254 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 MRS2Q9HD23 443 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 RAPGEFL1Q9UHV5 662 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 NDUFB9Q9Y6M9 179 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 FOCADQ5VW36 1801 aa9.98□□□□□ -0.81
CSTF1-203ENST00000428552 TRIM43BA6NCK2 446 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 USP17L10C9JJH3 530 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 GDF11O95390 407 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 ASNSP08243 561 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 CYBAP13498 195 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 COL9A1P20849 921 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 ITGB8P26012 769 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 CYP2C19P33261 490 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 EPHB4P54760 987 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 TFCP2Q12800 502 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 NBR1Q14596 966 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 ADGRA1Q86SQ6 560 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 TEX11Q8IYF3 940 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 BADQ92934 168 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 TRIM43Q96BQ3 446 aaPredicted RBP9.97□□□□□ -0.81
CSTF1-203ENST00000428552 EDC3Q96F86 508 aaKnown RBP9.97□□□□□ -0.81
CSTF1-203ENST00000428552 PDLIM7Q9NR12 457 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 TMOD4Q9NZQ9 345 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 PI4KBQ9UBF8 816 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 ZBTB21Q9ULJ3 1066 aa9.97□□□□□ -0.81
CSTF1-203ENST00000428552 SLC15A5A6NIM6 579 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 UBTFL1P0CB47 393 aaPredicted RBP9.96□□□□□ -0.82
CSTF1-203ENST00000428552 PTPREP23469 700 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 ARID4AP29374 1257 aaPredicted RBP9.96□□□□□ -0.82
CSTF1-203ENST00000428552 MCAMP43121 646 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 GRB14Q14449 540 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 GJC2Q5T442 439 aaPredicted RBP9.96□□□□□ -0.82
CSTF1-203ENST00000428552 SLC39A5Q6ZMH5 540 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 SPATA5Q8NB90 893 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 C12orf42Q96LP6 360 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 BTBD7Q9P203 1132 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 ATP11BQ9Y2G3 1177 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 RABGAP1Q9Y3P9 1069 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 FLT1P17948 1338 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 ZNF236Q9UL36 1845 aa9.96□□□□□ -0.82
CSTF1-203ENST00000428552 CHD9Q3L8U1 2897 aa9.95□□□□□ -0.82
CSTF1-203ENST00000428552 LDHCP07864 332 aa9.95□□□□□ -0.82
CSTF1-203ENST00000428552 FOSL2P15408 326 aa9.95□□□□□ -0.82
CSTF1-203ENST00000428552 GSTO1P78417 241 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms